| Identifier | NATRESASSCMP [View Relations] [View Alignment]
|
| Accession | PR00447 |
| No. of Motifs | 7 |
| Creation Date | 12-DEC-1995 (UPDATE 07-JUN-1999) |
| Title | Natural resistance-associated macrophage protein signature |
| Database References |
INTERPRO; IPR001046
|
| Literature References | 1. CELLIER, M., PRIVE, G., BELOUCHI, A., KWAN, T., RODRIGUES, V., CHIA, W.
AND GROS, P.
Nramp defines a family of membrane proteins.
PROC.NATL.ACAD.SCI.U.S.A. 91 10089-10093 (1995).
|
| Documentation | In mice, natural resistance to infection with intracellular parasites is
controlled by the Bcg locus, which modulates the cytostatic/cytocidal
activity of phagocytes [1]. A candidate gene has recently been identified,
Nramp1 [1]: Nramp1 is expressed exclusively in macrophages and poly-
morphonuclear leukocytes, and encodes a polypeptide (natural resistance-
associated macrophage protein) with features typical of integral membrane
proteins. The sequence is characterised by a highly-conserved hydrophobic
core (thought to comprise 10-12 transmembrane (TM) domains), a glycosylated
extracytoplasmic loop, and a possible intracytoplasmic consensus transport
signature. These characteristics have led to speculation that the Nramp
polypeptides may form part of a group of transporters or channels that
act on as yet unidentified substrates [1].
NATRESASSCMP is a 7-element fingerprint that provides a signature for the
Nramp family of membrane proteins. The fingerprint was derived from an
initial alignment of 9 sequences: the motifs were drawn from hydrophobic
regions spanning virtually the full alignment length - motifs 1-4 encode
putative TM domains 3-6; motif 5 spans the possible transport signature;
and motifs 6 and 7 encode TM domains 9 and 10. Two iterations on OWL26.3
were required to reach convergence, at which point a true set comprising
12 sequences was identified. Two partial matches were also found: MLU151847
fails to make significant matches with motifs 2, 3, 5 and 6; and OANRAMP
is a fragment lacking the final 5 motifs.
An update on SPTR37_9f identified a true set of 25 sequences, and 4
partial matches.
|
| Summary Information | 25 codes involving 7 elements
0 codes involving 6 elements
0 codes involving 5 elements
4 codes involving 4 elements
0 codes involving 3 elements
0 codes involving 2 elements
|
| Composite Feature Index | | 7 | 25 | 25 | 25 | 25 | 25 | 25 | 25 | | 6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | 4 | 4 | 1 | 0 | 4 | 3 | 0 | 4 | | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | 1 | 2 | 3 | 4 | 5 | 6 | 7 |
|
| True Positives | MVL_DROME NRAM_CEREL NRM1_BISBI NRM1_BOVIN
NRM1_BUBAR NRM1_CHICK NRM1_HUMAN NRM1_MOUSE
NRM2_MOUSE O19035 O22192 O24209
O35172 O43288 O54902 O54903
O60932 O77741 Q12078 Q21433
Q21434 Q41268 SMF1_YEAST SMF2_YEAST
YAV8_SCHPO |
| True Positive Partials | |
| Sequence Titles | MVL_DROME MALVOLIO PROTEIN - DROSOPHILA MELANOGASTER (FRUIT FLY).
NRAM_CEREL NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 1 (NRAMP 1) - CERVUS ELAPHUS (RED DEER).
NRM1_BISBI NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 1 (NRAMP 1) - BISON BISON (AMERICAN BISON).
NRM1_BOVIN NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 1 (NRAMP 1) - BOS TAURUS (BOVINE).
NRM1_BUBAR NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 1 (NRAMP 1) - BUBALUS ARNEE BUBALIS (DOMESTIC WATER BUFFALO).
NRM1_CHICK NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 1 (NRAMP 1) - GALLUS GALLUS (CHICKEN).
NRM1_HUMAN NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 1 (NRAMP 1) - HOMO SAPIENS (HUMAN).
NRM1_MOUSE NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 1 (NRAMP 1) - MUS MUSCULUS (MOUSE).
NRM2_MOUSE NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 2 (NRAMP 2) - MUS MUSCULUS (MOUSE).
O19035 NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 1 - OVIS ARIES (SHEEP).
O22192 PUTATIVE METAL ION TRANSPORTER (NRAMP) - ARABIDOPSIS THALIANA (MOUSE-EAR CRESS).
O24209 INTEGRAL MEMBRANE PROTEIN - ORYZA SATIVA (RICE).
O35172 NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 2 - RATTUS NORVEGICUS (RAT).
O43288 NRAMP2 - HOMO SAPIENS (HUMAN).
O54902 NATURAL RESISTANCE ASSOCIATED MACROPHAGE PROTEIN-2 - RATTUS NORVEGICUS (RAT).
O54903 NATURAL RESISTANCE ASSOCIATED MACROPHAGE PROTEIN-2 - MUS MUSCULUS (MOUSE).
O60932 NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 2 - HOMO SAPIENS (HUMAN).
O77741 NATURAL RESISTANCE ASSOCIATED MACROPHAGE PROTEIN 1 - SUS SCROFA DOMESTICA (DOMESTIC PIG).
Q12078 CHROMOSOME XII READING FRAME ORF YLR034C - SACCHAROMYCES CEREVISIAE (BAKER'S YEAST).
Q21433 SIMILAR TO M. MUSCULUS TRANSPORT SYSTEM MEMBRANE PROTEIN - CAENORHABDITIS ELEGANS.
Q21434 FOLATE-LIKE TRANSPORTER 4 - CAENORHABDITIS ELEGANS.
Q41268 OSNRAMP1 - ORYZA SATIVA (RICE).
SMF1_YEAST TRANSPORTER PROTEIN SMF1/ESP1 - SACCHAROMYCES CEREVISIAE (BAKER'S YEAST).
SMF2_YEAST TRANSPORTER PROTEIN SMF2 - SACCHAROMYCES CEREVISIAE (BAKER'S YEAST).
YAV8_SCHPO HYPOTHETICAL 57.6 KD PROTEIN C27F1.08 IN CHROMOSOME I - SCHIZOSACCHAROMYCES POMBE (FISSION YEAST).
Q50103 HYPOTHETICAL 40.0 KD PROTEIN BCG - MYCOBACTERIUM LEPRAE.
Y1BI_MYCTU HYPOTHETICAL 45.0 KD PROTEIN CY21C12.18C - MYCOBACTERIUM TUBERCULOSIS.
YDAR_BACSU HYPOTHETICAL 45.7 KD PROTEIN IN MUTT-GSIB INTERGENIC REGION - BACILLUS SUBTILIS.
YFEP_ECOLI HYPOTHETICAL 44.2 KD PROTEIN IN GLK-NUPC INTERGENIC REGION - ESCHERICHIA COLI.
|
| Scan History | OWL26_3 2 50 NSINGLE
SPTR37_9f 2 50 NSINGLE
|
| Initial Motifs | Motif 1 width=27
Element Seqn Id St Int Rpt
LWLTIELAIVGSDMQEVIGTAISFNLL NRAM_MOUSE 134 134 -
LWLMVELAIIGSDMQEVIGSAIAINLL HUMNRAMP2 92 92 -
LWLTIELAIVGSDMQEVIGTAIAFNLL JC2383 70 70 -
LWLMVELAIIGSDMQEVIGSAIAINLL MUSNRAMPB 149 149 -
LWLMIEIAIVCSDMQEVIGTAIAIYLL CELK11G122 70 70 -
LYILAEMAIIATDLAEVVGTAISLNIL SMF2_YEAST 136 136 -
LYFFAECAVIATDIAEVIGTAIALNIL SMF1_YEAST 155 155 -
LWLMIEIAIVCSDMQEVIGTAIAIFLL CELK11G123 135 135 -
LWLTIELAIVGSDMQEVIGTAIAFNLL HUMNRAMP 137 137 -
Motif 2 width=20
Element Seqn Id St Int Rpt
FVPLYVGVFITILDTFTFLL CELK11G123 165 3 -
RIPLWGGVLITIVDTFFFLF HUMNRAMP 167 3 -
RIPLWGGVLITIVDTFFFLF NRAM_MOUSE 164 3 -
RIPLWGGVLITIADTFVFLF HUMNRAMP2 122 3 -
RVPVWGGVLITIADTFVFLF MUSNRAMPB 179 3 -
KIPLLVGVLITILDTFTFLF CELK11G122 100 3 -
RIPLWGGVLITIVDTFFFLF JC2383 100 3 -
KVPLPAGVAITVVDVFLIMF SMF1_YEAST 183 1 -
HIPLALGVILTVVDVLIVLL SMF2_YEAST 164 1 -
Motif 3 width=22
Element Seqn Id St Int Rpt
LRKLEAFFGFLITIMALTFGYE MUSNRAMPB 204 5 -
IRKLEFIFVALISTMAISFGYE CELK11G122 125 5 -
IRKLELIFGFLILTMTVSFGYE CELK11G123 190 5 -
IRIFECFVAVLVVGVCICFAIE SMF1_YEAST 214 11 -
IRIFEAFVSLLVVLTVVCFTVE SMF2_YEAST 194 10 -
LRKLEAFFGLLITIMALTFGYE HUMNRAMP 192 5 -
LRKLEAFFGLLITIMALTFGYE JC2383 125 5 -
LRKLEAFFGLLITIMALTFGYE NRAM_MOUSE 189 5 -
LRKLEAFFGFLITIMALTFGYE HUMNRAMP2 147 5 -
Motif 4 width=24
Element Seqn Id St Int Rpt
AISILGATVMPHSLFLGSALVQPR SMF1_YEAST 267 31 -
AVGIVGAIIMPHNIYLHSALVKSR JC2383 177 30 -
AVGIVGAIIMPHNIYLHSALVKSR HUMNRAMP 244 30 -
AVGIVGAIIMPHNIYLHSALVKSR NRAM_MOUSE 241 30 -
AVGIVGAVIMPHNMYLHSALVKSR HUMNRAMP2 199 30 -
AVGIVGAVIMPHNMYLHSALVKSR MUSNRAMPB 256 30 -
AISIFGAVIMPHNFYLHSALVKSR CELK11G122 177 30 -
AISVVGAVIMPHNLYLHSALVKSR CELK11G123 242 30 -
SLAILGATVMPHSLYLGSGVVQPR SMF2_YEAST 246 30 -
Motif 5 width=20
Element Seqn Id St Int Rpt
GQSSTMTGTYSGQFVMEGFL HUMNRAMP2 326 103 -
GQSSTMTGTYAGQFVMEGFL JC2383 305 104 -
GQSSTMTGTYAGQFVMEGFL HUMNRAMP 372 104 -
GQSSTMTGTYAGQFVMEGFL NRAM_MOUSE 369 104 -
GQSSTMTGTYSGQFVMEGFL MUSNRAMPB 383 103 -
GQSSTMTGTYTGQFVMEGFV CELK11G122 276 75 -
GQSSTMTGTYTGQFVMEGFV CELK11G123 365 99 -
GQSAGIVCTLSGQMVSEGFL SMF2_YEAST 374 104 -
GQSAGVVCTMAGQIVSEGHI SMF1_YEAST 406 115 -
Motif 6 width=18
Element Seqn Id St Int Rpt
RVLLTRSCAILPTVLVAV NRAM_MOUSE 397 8 -
RVLLTRSCAILPTVLVAV HUMNRAMP 400 8 -
RVLLTRSCAILPTVLVAV JC2383 333 8 -
RVLITRAIAITPTLVLTF CELK11G123 393 8 -
RVLITRAVAITPTLILCI CELK11G122 304 8 -
RRSATRAVAITPCLILVL SMF2_YEAST 402 8 -
RRLATRCISIIPCLVISI SMF1_YEAST 434 8 -
RVILTRSIAIIPTLLVAV MUSNRAMPB 411 8 -
RVVLTRSIAIIPTLLVAV HUMNRAMP2 354 8 -
Motif 7 width=20
Element Seqn Id St Int Rpt
NVLQSLLLPFAVLPILTFTS NRAM_MOUSE 429 14 -
NVLQSLQLPFALIPILTFTS MUSNRAMPB 443 14 -
NCVQMVQLPFALIPMITFTS CELK11G122 337 15 -
NCVQMIQLPFALIPIITFTS CELK11G123 426 15 -
NVLQSLLLPFAVLPILTFTS JC2383 365 14 -
QVVLSLLLPFVSAPLLYFTS SMF2_YEAST 434 14 -
QVVLSIVLPFLVAPLIFFTC SMF1_YEAST 466 14 -
NVLQSLLLPFAVLPILTFTS HUMNRAMP 432 14 -
NVLQSLQLPFALIPILTFTY HUMNRAMP2 386 14 -
|
| Final Motifs | Motif 1 width=27
Element Seqn Id St Int Rpt
LWLTIELAIVGSDMQEVIGTAIAFNLL NRM1_HUMAN 137 137 -
LWLTIELAIVGSDMQEVIGTAIAFSLL NRAM_CEREL 134 134 -
LWLMVELAIIGSDMQEVIGSAIAINLL O43288 149 149 -
LWLMVELAIIGSDMQEVIGSAIAINLL O60932 149 149 -
LWLMVELAIIGSDMQEVIGSAIAINLL O54903 149 149 -
LWLTIELAIVGSDMQEVIGTAISFNLL NRM1_MOUSE 134 134 -
LWLTIELAIVGSDMQEVIGTAIAFSLL O19035 134 134 -
LWLMVELAIIGSDMQEVIGSAIAINLL O35172 149 149 -
LWLMVELAIIGSDMQEVIGSAIAINLL O54902 149 149 -
LWLTIELAIVGSDMQEVIGTAIAFSLL NRM1_BOVIN 134 134 -
LWLTIELAIVGSDMQEVIGTAIAFSLL NRM1_BUBAR 134 134 -
LWLMVELAIIGSDMQEVIGSAIAINLL NRM2_MOUSE 149 149 -
LWLTIELAIVGSDMQEVIGTAIAFSLL NRM1_BISBI 134 134 -
LWLNMELAIVGSDMQEVIGTAIAFNLL O77741 134 134 -
LWLMMEIAIIGSDMQEVIGTAIAFSLL NRM1_CHICK 142 142 -
LWIMIEIAIIGSDMQEVIGTAIAIYLL MVL_DROME 156 156 -
LWLMIEIAIVCSDMQEVIGTAIAIYLL Q21433 70 70 -
LWLMIEIAIVCSDMQEVIGTAIAIFLL Q21434 135 135 -
LWAMTELALVGADIQEVIGSAIAIKIL O24209 89 89 -
LWVMAELALIGSDIQEVIGSAIAIKIL O22192 135 135 -
LWLLAELAVIASDIPEVIGTGFAFNLL Q41268 113 113 -
LYILAEMAIIATDLAEVVGTAISLNIL SMF2_YEAST 136 136 -
LYLFAEVAIIATDLAEVVGTAIALQIL Q12078 90 90 -
LYFFAECAVIATDIAEVIGTAIALNIL SMF1_YEAST 155 155 -
FYVLAEIAIIATDIAEVIGTAVALKIL YAV8_SCHPO 150 150 -
Motif 2 width=20
Element Seqn Id St Int Rpt
RIPLWGGVLITIVDTFFFLF NRM1_HUMAN 167 3 -
RIPLWGGVLITIVDTFFFLF NRAM_CEREL 164 3 -
RIPLWGGVLITIADTFVFLF O43288 179 3 -
RIPLWGGVLITIADTFVFLF O60932 179 3 -
RVPLWGGVLITIADTFVFLF O54903 179 3 -
RIPLWGGVLITIVDTFFFLF NRM1_MOUSE 164 3 -
RIPLWGGVLITIVDTFFFLF O19035 164 3 -
RVPLYGGVLITIADTFVFLF O35172 179 3 -
RVPLYGGVLITIADTFVFLF O54902 179 3 -
RIPLWGGVLITVVDTFFFLF NRM1_BOVIN 164 3 -
RIPLWGGVLITVVDTFFFLF NRM1_BUBAR 164 3 -
RVPVWGGVLITIADTFVFLF NRM2_MOUSE 179 3 -
RIPLWGGVLITIVDAFFFLF NRM1_BISBI 164 3 -
RIPLWGGVLITVVDTFFFLY O77741 164 3 -
RIPLWGGVLITITDTLFFLF NRM1_CHICK 172 3 -
VVPLWGGVLITIVDTFTFLF MVL_DROME 186 3 -
KIPLLVGVLITILDTFTFLF Q21433 100 3 -
FVPLYVGVFITILDTFTFLL Q21434 165 3 -
TVPLWGGVVITAFDCFIFLF O24209 119 3 -
ILPLWAGVVITALDCFVFLF O22192 165 3 -
HIPVWTGVLIAGSSTLLLLG Q41268 141 1 -
HIPLALGVILTVVDVLIVLL SMF2_YEAST 164 1 -
KIPLTWGVLLTVLDVLVILM Q12078 118 1 -
KVPLPAGVAITVVDVFLIMF SMF1_YEAST 183 1 -
HIPLVAGVVITILDVLLVLI YAV8_SCHPO 178 1 -
Motif 3 width=22
Element Seqn Id St Int Rpt
LRKLEAFFGLLITIMALTFGYE NRM1_HUMAN 192 5 -
LRKLEAFFGFLITIMALTFGYE NRAM_CEREL 189 5 -
LRKLEAFFGFLITIMALTFGYE O43288 204 5 -
LRKLEAFFGFLITIMALTFGYE O60932 204 5 -
LRKLEAFFGFLITIMALTFGYE O54903 204 5 -
LRKLEAFFGLLITIMALTFGYE NRM1_MOUSE 189 5 -
LRKLEAFFGFLITIMALTFGYE O19035 189 5 -
LRKLEAFFGFLITIMALTFGYE O35172 204 5 -
LRKLEAFFGFLITIMALTFGYE O54902 204 5 -
LRKLEAFFGFLITIMALTFGYE NRM1_BOVIN 189 5 -
LRKLEAFFGFLITIMALTFGYE NRM1_BUBAR 189 5 -
LRKLEAFFGFLITIMALTFGYE NRM2_MOUSE 204 5 -
LRKLEAFFGFLITIMALTFGYE NRM1_BISBI 189 5 -
LRKLEAFFAFLIAIMAFTFGYE O77741 189 5 -
LRKLEAFFGFLITIMALTFGYE NRM1_CHICK 197 5 -
LRKLEFLFGTLITIMAVSFGYE MVL_DROME 211 5 -
IRKLEFIFVALISTMAISFGYE Q21433 125 5 -
IRKLELIFGFLILTMTVSFGYE Q21434 190 5 -
VRKLEAFFGVLIAVMAVSFAIM O24209 144 5 -
IRKLEAVFAVLIATMGVSFAWM O22192 190 5 -
VRKLEVVVALLVFVMAGCFFVE Q41268 166 5 -
IRIFEAFVSLLVVLTVVCFTVE SMF2_YEAST 194 10 -
VRVFEFGVGILVIGTCICFVLE Q12078 149 11 -
IRIFECFVAVLVVGVCICFAIE SMF1_YEAST 214 11 -
VRIFETAVALLVLVVAISFAVV YAV8_SCHPO 208 10 -
Motif 4 width=24
Element Seqn Id St Int Rpt
AVGIVGAIIMPHNIYLHSALVKSR NRM1_HUMAN 244 30 -
AVGIVGAIIMPHNIYLHSSLVKSR NRAM_CEREL 241 30 -
AVGIVGAVIMPHNMYLHSALVKSR O43288 256 30 -
AVGIVGAVIMPHNMYLHSALVKSR O60932 256 30 -
AVGIVGAVIMPHNMYLHSALVKSR O54903 256 30 -
AVGIVGAIIMPHNIYLHSALVKSR NRM1_MOUSE 241 30 -
AVGIVGAIIMPHNIYLHSSLVKSR O19035 241 30 -
AVGIVGAVIMPHNMYLHSALVKSR O35172 256 30 -
AVGIVGAVIMPHNMYLHSALVKSR O54902 256 30 -
AVGIIGAIIMPHNIYLHSSLVKSR NRM1_BOVIN 241 30 -
AVGIIGAIIMPHNIYLHSSLVKSR NRM1_BUBAR 241 30 -
AVGIVGAVIMPHNMYLHSALVKSR NRM2_MOUSE 256 30 -
AVGIIGAIIMPHNIYLHSSLVKSR NRM1_BISBI 241 30 -
AVGIVGAIIMPHNIYLHSALVKSR O77741 241 30 -
AVGIVGAIIMPHNIFLHSSLVKTR NRM1_CHICK 249 30 -
AVGVVGAVIMPHNLYLHSALVKSR MVL_DROME 263 30 -
AISIFGAVIMPHNFYLHSALVKSR Q21433 177 30 -
AISVVGAVIMPHNLYLHSALVKSR Q21434 242 30 -
AVGIVGCIIMPHNVFLHSALVESR O24209 193 27 -
AVGVVGCIIMPHNVFLHSALVQSR O22192 239 27 -
SIALLGALVMPHNLFLHSALVLSR Q41268 216 28 -
SLAILGATVMPHSLYLGSGVVQPR SMF2_YEAST 246 30 -
SLGILGATVMPHSLYLGSSIVKPR Q12078 202 31 -
AISILGATVMPHSLFLGSALVQPR SMF1_YEAST 267 31 -
SIGILGATVMPHSLFLGSGLVQTR YAV8_SCHPO 260 30 -
Motif 5 width=20
Element Seqn Id St Int Rpt
GQSSTMTGTYAGQFVMEGFL NRM1_HUMAN 372 104 -
GQSSTMTGTYAGQFVMEGFL NRAM_CEREL 369 104 -
GQSSTMTGTYSGQFVMEGFL O43288 383 103 -
GQSSTMTGTYSGQFVMEGFL O60932 383 103 -
GQSSTMTGTYSGQFVMEGFL O54903 383 103 -
GQSSTMTGTYAGQFVMEGFL NRM1_MOUSE 369 104 -
GQSSTMTGTYAGQFVMEGFL O19035 369 104 -
GQSSTMTGTYSGQFVMEGFL O35172 383 103 -
GQSSTMTGTYSGQFVMEGFL O54902 383 103 -
GQSSTMTGTYAGQFVMEGFL NRM1_BOVIN 369 104 -
GQSSTMTGTYAGQFVMEGFL NRM1_BUBAR 369 104 -
GQSSTMTGTYSGQFVMEGFL NRM2_MOUSE 383 103 -
GQSSTMTGTYAGQFVMEGFL NRM1_BISBI 369 104 -
GQSSTMTGTYAGQFVMEGFL O77741 369 104 -
GQSSTMTGTYAGQFVMEGFL NRM1_CHICK 377 104 -
GQSSTMTGTYAGQFSMEGFL MVL_DROME 395 108 -
GQSSTMTGTYTGQFVMEGFV Q21433 276 75 -
GQSSTMTGTYTGQFVMEGFV Q21434 365 99 -
GQSSTITGTYAGQFVMGGFL O24209 300 83 -
GQSSTITGTYAGQFIMGGFL O22192 346 83 -
GQSSTITGTYAGQYVMQGFL Q41268 326 86 -
GQSAGIVCTLSGQMVSEGFL SMF2_YEAST 374 104 -
GQSAGIICTLAGQIVSEGFL Q12078 318 92 -
GQSAGVVCTMAGQIVSEGHI SMF1_YEAST 406 115 -
GMSAGYVCTIAGQIVSEGYI YAV8_SCHPO 382 98 -
Motif 6 width=18
Element Seqn Id St Int Rpt
RVLLTRSCAILPTVLVAV NRM1_HUMAN 400 8 -
RVLLTRSCAILPTVLVAV NRAM_CEREL 397 8 -
RVVLTRSIAIIPTLLVAV O43288 411 8 -
RVVLTRSIAIIPTLLVAV O60932 411 8 -
RVILTRSIAIIPTLLVAV O54903 411 8 -
RVLLTRSCAILPTVLVAV NRM1_MOUSE 397 8 -
RVLLTRSCAIPPTVLLAV O19035 397 8 -
RVILTRSIAIIPTLLVAV O35172 411 8 -
RVILTRSIAIIPTLLVAV O54902 411 8 -
RVLLTRSCAILPTVLLAV NRM1_BOVIN 397 8 -
RVLLTRSCAILPTVLLAV NRM1_BUBAR 397 8 -
RVILTRSIAIIPTLLVAV NRM2_MOUSE 411 8 -
RVLLTRSCAILPTVLLAV NRM1_BISBI 397 8 -
RLLLTRSCAILPALLVAV O77741 397 8 -
RVLFTRSLAILPTLFVAA NRM1_CHICK 405 8 -
RVLVTRCIAIIPTFCLAM MVL_DROME 423 8 -
RVLITRAVAITPTLILCI Q21433 304 8 -
RVLITRAIAITPTLVLTF Q21434 393 8 -
RAMITRSFAIIPTMIVAL O24209 328 8 -
RALITRSCAIIPTIIVAL O22192 374 8 -
RNLMTRSIAIVPSLIVSI Q41268 354 8 -
RRSATRAVAITPCLILVL SMF2_YEAST 402 8 -
TRLCTRLIAIVPCLFVTL Q12078 346 8 -
RRLATRCISIIPCLVISI SMF1_YEAST 434 8 -
RRVITRAIAIIPCLVVSA YAV8_SCHPO 410 8 -
Motif 7 width=20
Element Seqn Id St Int Rpt
NVLQSLLLPFAVLPILTFTS NRM1_HUMAN 432 14 -
NVLQSLLLPFAVLPILTFTS NRAM_CEREL 429 14 -
NVLQSLQLPFALIPILTFTS O43288 443 14 -
NVLQSLQLPFALIPILTFTS O60932 443 14 -
NVLQSLQLPFALIPILTFTS O54903 443 14 -
NVLQSLLLPFAVLPILTFTS NRM1_MOUSE 429 14 -
NVLQSLLLPFAVLPILTFTS O19035 429 14 -
NVLQSLQLPFALIPILTFTS O35172 443 14 -
NVLQSLQLPFALIPILTFTS O54902 443 14 -
NVLQSLLLPFAVLPILTFTS NRM1_BOVIN 429 14 -
NVLQSLLLPFAVLPILTFTS NRM1_BUBAR 429 14 -
NVLQSLQLPFALIPILTFTS NRM2_MOUSE 443 14 -
NVLQSLLLPFAVLPILTFTS NRM1_BISBI 429 14 -
NVLQSLLLPFAVLPILTFTS O77741 429 14 -
NVLQSILLPFAVLPVLTFTS NRM1_CHICK 437 14 -
NAVMSLQLPFAAIPTIAFTS MVL_DROME 455 14 -
NCVQMVQLPFALIPMITFTS Q21433 337 15 -
NCVQMIQLPFALIPIITFTS Q21434 426 15 -
NVLQSIQIPFALIPLITLVS O24209 362 16 -
NVLQSIQIPFALIPLLCLVS O22192 408 16 -
SMILSFELPFALIPLLKFSS Q41268 386 14 -
QVVLSLLLPFVSAPLLYFTS SMF2_YEAST 434 14 -
QVVLSLILPIVSAPLIYFTA Q12078 378 14 -
QVVLSIVLPFLVAPLIFFTC SMF1_YEAST 466 14 -
QVCLSILLPFLTFPLVMFTC YAV8_SCHPO 442 14 -
|