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PR00135

Identifier
LYZLACT  [View Relations]  [View Alignment]  
Accession
PR00135
No. of Motifs
6
Creation Date
29-MAY-1991  (UPDATE 27-JUN-1999)
Title
Lysozyme/alpha-lactalbumin superfamily signature
Database References
PRINTS; PR00136 LACTALBUMIN; PR00137 LYSOZYME
PROSITE; PS00128 LACTALBUMIN_LYSOZYME
BLOCKS; BL00128
PFAM; PF00062 lys
INTERPRO; IPR001916
PDB; 1LYM
SCOP; 1LYM
CATH; 1LYM
Literature References
1. SHEWALE, J.G., SUDHIR, K.S. AND BREW, K. 
Evolution of alpha-lactalbumins.
J.BIOL.CHEM. 259 4947-4956 (1984).
 
2. IRWIN, D.M. AND WILSON, A.C. 
Multiple cDNA sequences and the evolution of bovine stomach lysozyme. 
J.BIOL.CHEM. 264 11387-11393 (1989).
 
3. STUART, D.I., ACHYARA, K.R., WALKER, N.P.C., SMITH, S.G., LEWIS M.
AND  PHILLIPS D.C. 
Alpha-lactalbumin possesses a novel calcium binding loop. 
NATURE 324 84-87 (1986). 
 
4. NITTA, K., HIDEAKI, H., SHINTARO, S. AND SHIMAZAKI, K. 
The calcium binding property of equine lysozyme. 
FEBS LETT. 223 405-408 (1987).
Documentation
Lysozyme C and alpha-lactalbumin and are similar both in terms of primary 
sequence and structure, and probably evolved from a common ancestral 
protein. There is, however, no similarity in function as lactalbumin 
promotes the conversion of galactosyltransferase to lactose synthase and is
essential for milk production [1], while lysozyme catalyses the hydrolysis 
of bacterial cell wall polysaccharides; it has also been recruited for a 
digestive role in certain ruminants and colobine monkeys [2]. Another 
significant difference between the 2 enzymes is that all lactalbumins have 
the ability to bind calcium [3], while this property is restricted to only 
a few lysozymes [4]. The binding site was deduced using high resolution 
X-ray structure analysis and was shown to consist of 3 aspartic acid 
residues. It was first suggested that calcium bound to lactalbumin 
stabilised the structure, but recently it has been claimed that calcium 
controls the release of lactalbumin from the golgi membrane and that the 
pattern of ion binding may also affect the catalytic properties of the 
lactose synthetase complex.
 
LYZLACT is a 6-element fingerprint that provides a signature for the 
lysozyme/alpha-lactalbumin superfamily. The fingerprint was derived from 
an initial alignment of 12 sequences: motif 5 encodes the calcium binding 
region, and together with motif 4 contains 3 of the 8 cysteine residues 
conserved in both lysozymes and lactalbumins (cf. PROSITE pattern 
LACTALBUMIN_LYSOZYME (PS00128)). Two iterations on OWL10.1 were required to
reach convergence, at which point a true set comprising 81 sequences was 
identified.
 
An update on SPTR37_9f identified a true set of 75 sequences, and 17
partial matches.
Summary Information
  75 codes involving  6 elements
   7 codes involving  5 elements
   3 codes involving  4 elements
   6 codes involving  3 elements
   0 codes involving  2 elements
Composite Feature Index
6757575757575
5347777
4103332
3006561
2000000
123456
True Positives
LCAA_HORSE    LCAB_HORSE    LCA_BOVIN     LCA_CAMDR     
LCA_CAPHI     LCA_EQUAS     LCA_ORNAN     LCA_PIG       
LCA_RABIT     LCA_SHEEP     LCA_TRIVU     LYC1_ANAPL    
LYC1_CAPHI    LYC1_PIG      LYC1_RAT      LYC2_CAPHI    
LYC2_ONCMY    LYC2_PIG      LYC2_RAT      LYC3_ANAPL    
LYC3_PIG      LYCK_SHEEP    LYCM_MOUSE    LYCP_MOUSE    
LYC_ALLNI     LYC_ANOGA     LYC_AXIAX     LYC_BOMMO     
LYC_BOVIN     LYC_CALJA     LYC_CAMDR     LYC_CERAE     
LYC_CHICK     LYC_CHRAM     LYC_COLAN     LYC_COLLI     
LYC_COLVI     LYC_COTJA     LYC_EQUAS     LYC_GORGO     
LYC_HORSE     LYC_HUMAN     LYC_HYACE     LYC_HYLLA     
LYC_HYPCU     LYC_LOPCA     LYC_LOPLE     LYC_MACMU     
LYC_MELGA     LYC_MIOTA     LYC_NASLA     LYC_NUMME     
LYC_OPIHO     LYC_ORTVE     LYC_PAPAN     LYC_PAVCR     
LYC_PHACO     LYC_PHAVE     LYC_PONPY     LYC_PREEN     
LYC_PYGNE     LYC_RABIT     LYC_SAGOE     LYC_SAISC     
LYC_SHEEP     LYC_SYRRE     LYC_TRIVU     O75951        
P87493        Q06283        Q06284        Q06285        
Q26363        Q27996        Q29447
True Positive Partials 
Codes involving 5 elements
LCA_CAVPO     LCA_HUMAN     LCA_MOUSE     LCA_PAPCY     
LCA_RAT       LYC1_TACAC    O02418        
Codes involving 4 elements
LCA_MACEU     LCA_MACRG     LYSS_DROME    
Codes involving 3 elements
LYC_TRINI     LYSA_DROME    LYSB_DROME    LYSD_DROME    
LYSE_DROME    LYSP_DROME
Sequence Titles
LCAA_HORSE  ALPHA-LACTALBUMIN A (LACTOSE SYNTHASE B PROTEIN) - EQUUS CABALLUS (HORSE). 
LCAB_HORSE  ALPHA-LACTALBUMIN B/C (LACTOSE SYNTHASE B PROTEIN) - EQUUS CABALLUS (HORSE). 
LCA_BOVIN   ALPHA-LACTALBUMIN PRECURSOR (LACTOSE SYNTHASE B PROTEIN) - BOS TAURUS (BOVINE). 
LCA_CAMDR   ALPHA-LACTALBUMIN (LACTOSE SYNTHASE B PROTEIN) - CAMELUS DROMEDARIUS (DROMEDARY) (ARABIAN CAMEL). 
LCA_CAPHI   ALPHA-LACTALBUMIN PRECURSOR (LACTOSE SYNTHASE B PROTEIN) - CAPRA HIRCUS (GOAT). 
LCA_EQUAS   ALPHA-LACTALBUMIN (LACTOSE SYNTHASE B PROTEIN) - EQUUS ASINUS (DONKEY). 
LCA_ORNAN   ALPHA-LACTALBUMIN (LACTOSE SYNTHASE B PROTEIN) - ORNITHORHYNCHUS ANATINUS (DUCKBILL PLATYPUS). 
LCA_PIG     ALPHA-LACTALBUMIN PRECURSOR (LACTOSE SYNTHASE B PROTEIN) - SUS SCROFA (PIG). 
LCA_RABIT   ALPHA-LACTALBUMIN (LACTOSE SYNTHASE B PROTEIN) - ORYCTOLAGUS CUNICULUS (RABBIT). 
LCA_SHEEP   ALPHA-LACTALBUMIN PRECURSOR (LACTOSE SYNTHASE B PROTEIN) - OVIS ARIES (SHEEP). 
LCA_TRIVU   ALPHA-LACTALBUMIN PRECURSOR (LACTOSE SYNTHASE B PROTEIN) - TRICHOSURUS VULPECULA (BRUSH-TAILED POSSUM). 
LYC1_ANAPL  LYSOZYME C-1 PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - ANAS PLATYRHYNCHOS (DOMESTIC DUCK). 
LYC1_CAPHI  LYSOZYME C-1 (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C-1) - CAPRA HIRCUS (GOAT). 
LYC1_PIG    LYSOZYME C-1 (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - SUS SCROFA (PIG). 
LYC1_RAT    LYSOZYME C, TYPE 1 PRECURSOR (EC 3.2.1.17) (1,4-BETA-N- ACETYLMURAMIDASE C) - RATTUS NORVEGICUS (RAT). 
LYC2_CAPHI  LYSOZYME C-2 (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C-2) - CAPRA HIRCUS (GOAT). 
LYC2_ONCMY  LYSOZYME C II PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - ONCORHYNCHUS MYKISS (RAINBOW TROUT) (SALMO GAIRDNERI). 
LYC2_PIG    LYSOZYME C-2 PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - SUS SCROFA (PIG). 
LYC2_RAT    LYSOZYME C, TYPE 2 PRECURSOR (EC 3.2.1.17) (1,4-BETA-N- ACETYLMURAMIDASE C) - RATTUS NORVEGICUS (RAT). 
LYC3_ANAPL  LYSOZYME C-3 (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE) - ANAS PLATYRHYNCHOS (DOMESTIC DUCK). 
LYC3_PIG    LYSOZYME C-3 PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - SUS SCROFA (PIG). 
LYCK_SHEEP  LYSOZYME C, KIDNEY (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - OVIS ARIES (SHEEP). 
LYCM_MOUSE  LYSOZYME C, TYPE M PRECURSOR (EC 3.2.1.17) (1,4-BETA-N- ACETYLMURAMIDASE C) - MUS MUSCULUS (MOUSE). 
LYCP_MOUSE  LYSOZYME C, TYPE P PRECURSOR (EC 3.2.1.17) (1,4-BETA-N- ACETYLMURAMIDASE C) - MUS MUSCULUS (MOUSE). 
LYC_ALLNI   LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - ALLENOPITHECUS NIGROVIRIDIS (ALLEN'S SWAMP MONKEY). 
LYC_ANOGA   LYSOZYME PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE) - ANOPHELES GAMBIAE (AFRICAN MALARIA MOSQUITO). 
LYC_AXIAX   LYSOZYME C 1 AND 2 (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - AXIS AXIS (AXIS DEER) (CHITAL). 
LYC_BOMMO   LYSOZYME PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE) - BOMBYX MORI (SILK MOTH). 
LYC_BOVIN   LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - BOS TAURUS (BOVINE). 
LYC_CALJA   LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - CALLITHRIX JACCHUS (COMMON MARMOSET). 
LYC_CAMDR   LYSOZYME C (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE) - CAMELUS DROMEDARIUS (DROMEDARY) (ARABIAN CAMEL). 
LYC_CERAE   LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - CERCOPITHECUS AETHIOPS (GREEN MONKEY) (GRIVET), AND ERYTHROCEBUS PATAS (RED GUENON) (HUSSAR). 
LYC_CHICK   LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) (ALLERGEN GAL D 4) (GAL D IV) - GALLUS GALLUS (CHICKEN). 
LYC_CHRAM   LYSOZYME C (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - CHRYSOLOPHUS AMHERSTIAE (LADY AMHERST'S PHEASANT). 
LYC_COLAN   LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - COLOBUS ANGOLENSIS (ANGOLAN COLOBUS), AND COLOBUS GUEREZA. 
LYC_COLLI   LYSOZYME C (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - COLUMBA LIVIA (DOMESTIC PIGEON). 
LYC_COLVI   LYSOZYME C (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - COLINUS VIRGINIANUS (BOBWHITE QUAIL) (COMMON BOBWHITE). 
LYC_COTJA   LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - COTURNIX COTURNIX JAPONICA (JAPANESE QUAIL). 
LYC_EQUAS   LYSOZYME C (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - EQUUS ASINUS (DONKEY). 
LYC_GORGO   LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - GORILLA GORILLA GORILLA (LOWLAND GORILLA). 
LYC_HORSE   LYSOZYME C (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - EQUUS CABALLUS (HORSE). 
LYC_HUMAN   LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - HOMO SAPIENS (HUMAN), PAN TROGLODYTES (CHIMPANZEE), AND PAN PANISCUS (PYGMY CHIMPANZEE) (BONOBO). 
LYC_HYACE   LYSOZYME PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE) - HYALOPHORA CECROPIA (CECROPIA MOTH). 
LYC_HYLLA   LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - HYLOBATES LAR (COMMON GIBBON). 
LYC_HYPCU   LYSOZYME PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE) - HYPHANTRIA CUNEA (FALL WEBWORM). 
LYC_LOPCA   LYSOZYME C (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - LOPHORTYX CALIFORNICA (CALIFORNIA QUAIL). 
LYC_LOPLE   LYSOZYME C (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE) - LOPHURA LEUCOMELANA (KALIJ PHEASANT). 
LYC_MACMU   LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - MACACA MULATTA (RHESUS MACAQUE). 
LYC_MELGA   LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - MELEAGRIS GALLOPAVO (COMMON TURKEY). 
LYC_MIOTA   LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - MIOPITHECUS TALAPOIN (TALAPOIN) (CERCOPITHECUS TALAPOIN). 
LYC_NASLA   LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - NASALIS LARVATUS (PROBOSCIS MONKEY). 
LYC_NUMME   LYSOZYME C (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - NUMIDA MELEAGRIS (HELMETED GUINEAFOWL). 
LYC_OPIHO   LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - OPISTHOCOMUS HOAZIN (HOATZIN). 
LYC_ORTVE   LYSOZYME C (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - ORTALIS VETULA (PLAIN CHACHALACA). 
LYC_PAPAN   LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - PAPIO ANUBIS (OLIVE BABOON), AND CERCOCEBUS TORQUATUS ATYS (RED-CROWNED MANGABEY) (SOOTY MANGABEY). 
LYC_PAVCR   LYSOZYME C (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE) - PAVO CRISTATUS (INDIAN PEAFOWL) (BLUE PEAFOWL). 
LYC_PHACO   LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - PHASIANUS COLCHICUS COLCHICUS (RING-NECKED PHEASANT). 
LYC_PHAVE   LYSOZYME C (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE) - PHASIANUS VERSICOLOR (GREEN PHEASANT). 
LYC_PONPY   LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - PONGO PYGMAEUS (ORANGUTAN). 
LYC_PREEN   LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - PRESBYTIS ENTELLUS (HANUMAN LANGUR), AND TRACHYPITHECUS VETULUS (PURPLE-FACED LANGUR). 
LYC_PYGNE   LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - PYGATHRIX NEMAEUS (DOVE LANGUR). 
LYC_RABIT   LYSOZYME C (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - ORYCTOLAGUS CUNICULUS (RABBIT). 
LYC_SAGOE   LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - SAGUINUS OEDIPUS (COTTON-TOP TAMARIN). 
LYC_SAISC   LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - SAIMIRI SCIUREUS (COMMON SQUIRREL MONKEY). 
LYC_SHEEP   LYSOZYME C 1A TO 4B (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - OVIS ARIES (SHEEP). 
LYC_SYRRE   LYSOZYME C (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE) - SYRMATICUS REEVESII (REEVES'S PHEASANT). 
LYC_TRIVU   LYSOZYME C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - TRICHOSURUS VULPECULA (BRUSH-TAILED POSSUM). 
O75951      LYSOZYME HOMOLOG - HOMO SAPIENS (HUMAN).      
P87493      LYSOZYME C PRECURSOR - TRACHYPITHECUS FRANCOISI, AND TRACHYPITHECUS OBSCURUS. 
Q06283      LYSOZYME - BOS TAURUS (BOVINE).               
Q06284      LYSOZYME - BOS TAURUS (BOVINE).               
Q06285      LYSOZYME - BOS TAURUS (BOVINE).               
Q26363      LYSOZYME - MANDUCA SEXTA (TOBACCO HAWKMOTH) (TOBACCO HORNWORM). 
Q27996      LYSOZYME - BOS TAURUS (BOVINE).               
Q29447      LYSOZYME PRECURSOR (EC 3.2.1.17) (MURAMIDASE) - BOS TAURUS (BOVINE). 
 
LCA_CAVPO   ALPHA-LACTALBUMIN PRECURSOR (LACTOSE SYNTHASE B PROTEIN) - CAVIA PORCELLUS (GUINEA PIG). 
LCA_HUMAN   ALPHA-LACTALBUMIN PRECURSOR (LACTOSE SYNTHASE B PROTEIN) - HOMO SAPIENS (HUMAN). 
LCA_MOUSE   ALPHA-LACTALBUMIN PRECURSOR (LACTOSE SYNTHASE B PROTEIN) - MUS MUSCULUS (MOUSE). 
LCA_PAPCY   ALPHA-LACTALBUMIN (LACTOSE SYNTHASE B PROTEIN) - PAPIO CYNOCEPHALUS (YELLOW BABOON). 
LCA_RAT     ALPHA-LACTALBUMIN PRECURSOR (LACTOSE SYNTHASE B PROTEIN) - RATTUS NORVEGICUS (RAT). 
LYC1_TACAC  LYSOZYME C I (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE C) - TACHYGLOSSUS ACULEATUS ACULEATUS (AUSTRALIAN ECHIDNA). 
O02418      LYSOZYME - ANOPHELES DARLINGI.                
 
LCA_MACEU   ALPHA-LACTALBUMIN PRECURSOR (LACTOSE SYNTHASE B PROTEIN) - MACROPUS EUGENII (TAMMAR WALLABY). 
LCA_MACRG   ALPHA-LACTALBUMIN (LACTOSE SYNTHASE B PROTEIN) - MACROPUS RUFOGRISEUS (RED-NECKED WALLABY). 
LYSS_DROME  LYSOZYME S PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE) - DROSOPHILA MELANOGASTER (FRUIT FLY). 
 
LYC_TRINI   LYSOZYME PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE) - TRICHOPLUSIA NI (CABBAGE LOOPER). 
LYSA_DROME  LYSOZYME A PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE) - DROSOPHILA MELANOGASTER (FRUIT FLY). 
LYSB_DROME  LYSOZYME B/C PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE) - DROSOPHILA MELANOGASTER (FRUIT FLY). 
LYSD_DROME  LYSOZYME D PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE) - DROSOPHILA MELANOGASTER (FRUIT FLY). 
LYSE_DROME  LYSOZYME E PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE) - DROSOPHILA MELANOGASTER (FRUIT FLY). 
LYSP_DROME  LYSOZYME P PRECURSOR (EC 3.2.1.17) (1,4-BETA-N-ACETYLMURAMIDASE) - DROSOPHILA MELANOGASTER (FRUIT FLY).
Scan History
OWL10_1    2  200  NSINGLE    
OWL17_1    1  245  NSINGLE    
OWL18_0    1  300  NSINGLE    
OWL19_1    1  300  NSINGLE    
OWL26_0    2  200  NSINGLE    
SPTR37_9f  4  200  NSINGLE
Initial Motifs
Motif 1  width=11
Element                        Seqn Id          St    Int   Rpt 
YRKCQASQILK                    LAKGAW            3      3     - 
FTKCEVSHAIE                    LART2             3      3     - 
IPRCELVKILR                    LZPY              3      3     - 
FTKCELSQNLY                    LCA_PAPCY         3      3     - 
LTRCELTEKLK                    LARB              3      3     - 
YGRCELAAAMK                    !LCOT             3      3     - 
FTKCELSEVLK                    LAHO              3      3     - 
FGRCELAAAMK                    LZUH              3      3     - 
FGRCELAAAMK                    LZQJEB            3      3     - 
YDRCEFARILK                    LYC3_PIG          3      3     - 
FERCELARTLK                    LYC_BOVIN        21     21     - 
LTKCEAFQKLK                    LCA_SHEEP        22     22     - 
 
Motif 2  width=10
Element                        Seqn Id          St    Int   Rpt 
YSLGNWVCAA                     !LCOT            23      9     - 
YSLGNWVCAA                     LZUH             23      9     - 
VTLPEWICTI                     LAHO             21      7     - 
YSLGNWVCAA                     LZQJEB           23      9     - 
ISMSEWICTL                     LARB             21      7     - 
IALPELICTM                     LCA_PAPCY        21      7     - 
KTVANWVCLV                     LZPY             23      9     - 
VSLPEWTCVL                     LART2            21      7     - 
IPLPELVCTM                     LAKGAW           21      7     - 
VSLPEWVCTA                     LCA_SHEEP        40      7     - 
VSLANWLCLT                     LYC_BOVIN        41      9     - 
VSLANWVCLA                     LYC3_PIG         23      9     - 
 
Motif 3  width=17
Element                        Seqn Id          St    Int   Rpt 
STDYGVLQINSRWWCND              LZQJEB           50     17     - 
STDYGIFQINSKWWCND              LYC_BOVIN        69     18     - 
STDYGIFQINSRYWCND              LYC3_PIG         51     18     - 
STEYGLFQINNKIWCKD              LCA_SHEEP        66     16     - 
STDYGVLQINSRWWCND              LZUH             50     17     - 
KTEYGLFQINNKMWCRD              LAHO             47     16     - 
STDYGILQINSRWWCND              !LCOT            50     17     - 
STEYGIFQINSKLWCVS              LARB             47     16     - 
STEYGLFQISNALWCKS              LCA_PAPCY        47     16     - 
SRDYGIFQINSKYWCND              LZPY             50     17     - 
STEYGLFQISNRDWCKE              LART2            47     16     - 
NKEYGIFQISNDGWCAE              LAKGAW           47     16     - 
 
Motif 4  width=10
Element                        Seqn Id          St    Int   Rpt 
SVCGILCSKF                     LAKGAW           71      7     - 
NICDISCDKF                     LART2            71      7     - 
NACNINCSKL                     LZPY             74      7     - 
NICDITCDKF                     LCA_PAPCY        71      7     - 
NICDTPCENF                     LARB             71      7     - 
NLCNIPCSAL                     !LCOT            74      7     - 
NICGISCDKF                     LAHO             71      7     - 
NLCNIPCSAL                     LZUH             74      7     - 
NLCNIPCSAL                     LZQJEB           74      7     - 
NICNISCDKF                     LCA_SHEEP        90      7     - 
DGCHVSCREL                     LYC_BOVIN        93      7     - 
NACHISCKVL                     LYC3_PIG         75      7     - 
 
Motif 5  width=16
Element                        Seqn Id          St    Int   Rpt 
LSSDITATVNCAKKIV               LZQJEB           84      0     - 
QSSDITATANCAKKIV               LZUH             84      0     - 
LDDDLTDDVMCAKKIL               LAHO             81      0     - 
LSSDITASVNCAKKIV               !LCOT            84      0     - 
LDDNLTDDVKCAMKIL               LARB             81      0     - 
LDDDITDDIMCAKKIL               LCA_PAPCY        81      0     - 
RDDNIADDIQCAKKIA               LZPY             84      0     - 
LDDELADDIVCAKKIV               LART2            81      0     - 
LDDDITDDIECAKKIL               LAKGAW           81      0     - 
LDDDLSQDIECAKRVV               LYC3_PIG         85      0     - 
MENDIAKAVACAKHIV               LYC_BOVIN       103      0     - 
LDDDLTDDIVCAKKIL               LCA_SHEEP       100      0     - 
 
Motif 6  width=12
Element                        Seqn Id          St    Int   Rpt 
GIDYWIAHKALC                   LCA_PAPCY       100      3     - 
GIDHWLAHKPLC                   LARB            100      3     - 
GMNAWVAWRNRC                   !LCOT           104      4     - 
GIDYWLAHKPLC                   LAHO            100      3     - 
GMNAWVAWRKHC                   LZUH            104      4     - 
GMNAWVAWRNRC                   LZQJEB          104      4     - 
GIKAWVAWKAHC                   LYC3_PIG        105      4     - 
GITAWVAWKSHC                   LYC_BOVIN       122      3     - 
GINYWLAHKALC                   LCA_SHEEP       119      3     - 
GLGYWKAHETFC                   LAKGAW          101      4     - 
GINYWLAHKPMC                   LART2           100      3     - 
GLTPWVAWKKYC                   LZPY            104      4     -
Final Motifs
Motif 1  width=11
Element                        Seqn Id          St    Int   Rpt 
FERCELARTLK                    LYCK_SHEEP        3      3     - 
FERCELARTLK                    LYC_PAPAN        21     21     - 
FERCELARTLK                    LYC_MIOTA        21     21     - 
FERCELARTLK                    LYC_MACMU        21     21     - 
FERCELARTLK                    LYC_CERAE        21     21     - 
FERCELARTLK                    P87493           21     21     - 
FERCELARTLK                    LYC_PREEN        21     21     - 
FERCELARTLK                    LYC_NASLA        21     21     - 
YERCELARTLK                    LYC_RABIT         3      3     - 
FERCELARTLK                    LYC_COLAN        21     21     - 
FERCELARTLK                    LYC_SAISC        21     21     - 
FERCELARTLK                    LYC_CALJA        21     21     - 
FERCELARTLK                    LYC_SAGOE        21     21     - 
FERCELARTLK                    LYC_PONPY        21     21     - 
FERCELARTLK                    LYC_HUMAN        21     21     - 
FERCELARTLK                    LYC_GORGO        21     21     - 
FERCELARTLK                    LYC_ALLNI        21     21     - 
FERCELARTLK                    LYC_PYGNE        21     21     - 
FERCELARTLK                    LYC_HYLLA        21     21     - 
YERCEFARTLK                    LYCM_MOUSE       21     21     - 
FKRCELAKTLK                    Q27996           21     21     - 
FERCELARSLK                    Q29447           21     21     - 
YERCQFARTLK                    LYC1_RAT         21     21     - 
YNRCELARILK                    LYCP_MOUSE       21     21     - 
YGRCELAAAMK                    LYC_SYRRE         3      3     - 
YDRCEFARILK                    LYC1_PIG          3      3     - 
YDRCEFARILK                    LYC3_PIG          3      3     - 
YGRCELAAAMK                    LYC_PHACO        21     21     - 
YGRCELAAAMK                    LYC_PHAVE         4      4     - 
FGRCELAAAMK                    LYC_CHICK        21     21     - 
YGRCELAAAMK                    LYC_CHRAM         3      3     - 
YGRCELAAAMK                    LYC_LOPLE         3      3     - 
FERCELARTLK                    Q06283           21     21     - 
FERCELARTLK                    Q06284           21     21     - 
FERCELARTLK                    Q06285           21     21     - 
YDRCEFARILK                    LYC2_PIG         21     21     - 
YGRCELAAAMK                    LYC_COTJA        21     21     - 
YGRCELAAAMK                    LYC_PAVCR         3      3     - 
FERCELARTLK                    LYC_SHEEP         3      3     - 
FERCELARTLK                    LYC1_CAPHI        3      3     - 
FGRCELAAAMK                    LYC_COLVI         3      3     - 
FGRCELAAAMK                    LYC_LOPCA         3      3     - 
FERCELARTLK                    LYC2_CAPHI        3      3     - 
FKHCELARILR                    LYC2_RAT         21     21     - 
FERCELARTLK                    LYC_BOVIN        21     21     - 
YGRCELAAAMK                    LYC_MELGA        21     21     - 
YKRCELAAAMK                    LYC_ORTVE         3      3     - 
WERCALARKLK                    LYC_CAMDR         3      3     - 
YSRCELAAAMK                    LYC1_ANAPL       21     21     - 
YERCELAAAMK                    LYC3_ANAPL        3      3     - 
FGRCELAAAMK                    LYC_NUMME         3      3     - 
FERCELARTLK                    LYC_AXIAX         3      3     - 
YDRCELARALK                    LYC2_ONCMY       18     18     - 
MERCEFARRIK                    LYC_TRIVU        21     21     - 
FSKCELAHKLK                    LYC_EQUAS         3      3     - 
FSKCELAHKLK                    LYC_HORSE         3      3     - 
FGKCELAKALA                    LYC_ANOGA        23     23     - 
FQICELSRVLK                    LCA_ORNAN         3      3     - 
IPRCELVKILR                    LYC_COLLI         3      3     - 
LTKCEAFQKLK                    LCA_SHEEP        22     22     - 
LTKCEVFQKLK                    LCA_CAPHI        22     22     - 
FTKCELSQVLK                    LCA_EQUAS         3      3     - 
LTKCEVFRELK                    LCA_BOVIN        22     22     - 
FTKCELSQVLK                    LCAA_HORSE        3      3     - 
ISRCDLAQVLQ                    O75951           22     22     - 
FTKCELSQVLK                    LCA_PIG          22     22     - 
IPRCELVKILR                    LYC_OPIHO        22     22     - 
FTKCQLSQVLK                    LCAB_HORSE        3      3     - 
FTKCKLSDELK                    LCA_CAMDR         3      3     - 
FSRCELVHELR                    Q26363           20     20     - 
FTRCGLVHELR                    LYC_BOMMO        21     21     - 
LTRCELTEKLK                    LCA_RABIT         3      3     - 
STRCDLVRELR                    LYC_HYPCU        24     24     - 
FTRCGLVQELR                    LYC_HYACE        22     22     - 
YGKCELNQILR                    LCA_TRIVU        22     22     - 
 
Motif 2  width=10
Element                        Seqn Id          St    Int   Rpt 
ISLANWMCLA                     LYCK_SHEEP       23      9     - 
ISLANWVCLA                     LYC_PAPAN        41      9     - 
ISLANWVCLA                     LYC_MIOTA        41      9     - 
ISLANWVCLA                     LYC_MACMU        41      9     - 
ISLANWVCLA                     LYC_CERAE        41      9     - 
VSLANWVCLA                     P87493           41      9     - 
VSLANWVCLA                     LYC_PREEN        41      9     - 
VSLANWVCLA                     LYC_NASLA        41      9     - 
VSLANWMCLA                     LYC_RABIT        23      9     - 
VSLANWVCLA                     LYC_COLAN        41      9     - 
ISLANWMCLA                     LYC_SAISC        41      9     - 
ISLANWMCLA                     LYC_CALJA        41      9     - 
ISLANWMCLA                     LYC_SAGOE        41      9     - 
ISLANWMCLA                     LYC_PONPY        41      9     - 
ISLANWMCLA                     LYC_HUMAN        41      9     - 
ISLANWMCLA                     LYC_GORGO        41      9     - 
ISLANWVCLA                     LYC_ALLNI        41      9     - 
VSLANWVCLA                     LYC_PYGNE        41      9     - 
ISLANWMCLA                     LYC_HYLLA        41      9     - 
VSLADWVCLA                     LYCM_MOUSE       41      9     - 
VSLANWMCLA                     Q27996           41      9     - 
ISLANWMCLA                     Q29447           41      9     - 
VSLADWVCLA                     LYC1_RAT         41      9     - 
VKLADWVCLA                     LYCP_MOUSE       41      9     - 
YSLGNWVCAA                     LYC_SYRRE        23      9     - 
VSLANWVCLA                     LYC1_PIG         23      9     - 
VSLANWVCLA                     LYC3_PIG         23      9     - 
YSLGNWVCAA                     LYC_PHACO        41      9     - 
YSLGNWVCAA                     LYC_PHAVE        24      9     - 
YSLGNWVCAA                     LYC_CHICK        41      9     - 
YSLGNWVCAA                     LYC_CHRAM        23      9     - 
YSLGNWVCAA                     LYC_LOPLE        23      9     - 
VSLANWLCLT                     Q06283           41      9     - 
VSLANWLCLT                     Q06284           41      9     - 
VSLANWLCLT                     Q06285           41      9     - 
VSLANWVCLA                     LYC2_PIG         41      9     - 
YSLGNWVCAA                     LYC_COTJA        41      9     - 
YSLGNWVCAA                     LYC_PAVCR        23      9     - 
VSLANWLCLT                     LYC_SHEEP        23      9     - 
VSLANWLCLT                     LYC1_CAPHI       23      9     - 
YSLGNWVCAA                     LYC_COLVI        23      9     - 
YSLGNWVCAA                     LYC_LOPCA        23      9     - 
VSLANWLCLT                     LYC2_CAPHI       23      9     - 
VSLENWMCMA                     LYC2_RAT         41      9     - 
VSLANWLCLT                     LYC_BOVIN        41      9     - 
YSLGNWVCAA                     LYC_MELGA        41      9     - 
YSLGNWVCAA                     LYC_ORTVE        23      9     - 
VSLANWMCLT                     LYC_CAMDR        23      9     - 
YSLGNWVCAA                     LYC1_ANAPL       41      9     - 
YSLGNWVCAA                     LYC3_ANAPL       23      9     - 
YSLGNWVCAA                     LYC_NUMME        23      9     - 
VSLANWLCLT                     LYC_AXIAX        23      9     - 
NSLPNWVCLS                     LYC2_ONCMY       38      9     - 
ISLANWVCLA                     LYC_TRIVU        41      9     - 
YSLANWVCMA                     LYC_EQUAS        23      9     - 
YSLANWVCMA                     LYC_HORSE        23      9     - 
ASLPDWVCLV                     LYC_ANOGA        40      6     - 
VSLEEWLCVI                     LCA_ORNAN        23      9     - 
KTVANWVCLV                     LYC_COLLI        23      9     - 
VSLPEWVCTA                     LCA_SHEEP        40      7     - 
VSLPEWVCTA                     LCA_CAPHI        40      7     - 
VTLPEWICTI                     LCA_EQUAS        21      7     - 
VSLPEWVCTT                     LCA_BOVIN        40      7     - 
VTLPEWICTI                     LCAA_HORSE       21      7     - 
YSLSDWLCLA                     O75951           42      9     - 
ITLPEWICTI                     LCA_PIG          40      7     - 
TTIADWICLV                     LYC_OPIHO        42      9     - 
VTLPEWICTI                     LCAB_HORSE       21      7     - 
ITLAEWICII                     LCA_CAMDR        21      7     - 
NLMRDWVCLV                     Q26363           37      6     - 
NLMRNWVCLV                     LYC_BOMMO        38      6     - 
ISMSEWICTL                     LCA_RABIT        21      7     - 
NQMGDWVCLV                     LYC_HYPCU        41      6     - 
TLMSNWVCLV                     LYC_HYACE        39      6     - 
ISLPELICTM                     LCA_TRIVU        40      7     - 
 
Motif 3  width=17
Element                        Seqn Id          St    Int   Rpt 
STDYGIFQINSHWWCND              LYCK_SHEEP       51     18     - 
STDYGIFQINSHYWCNN              LYC_PAPAN        69     18     - 
STDYGIFQINSHYWCNN              LYC_MIOTA        69     18     - 
STDYGIFQINSHYWCNN              LYC_MACMU        69     18     - 
STDYGIFQINSHYWCNN              LYC_CERAE        69     18     - 
STDYGIFQINSRYWCNN              P87493           69     18     - 
STDYGIFQINSRYWCNN              LYC_PREEN        69     18     - 
STDYGIFQINSRYWCNN              LYC_NASLA        69     18     - 
STDYGIFQINSRYWCND              LYC_RABIT        51     18     - 
STDYGIFQINSRYWCNN              LYC_COLAN        69     18     - 
STDYGIFQINSHYWCNN              LYC_SAISC        69     18     - 
STDYGIFQINSHYWCNN              LYC_CALJA        69     18     - 
STDYGIFQINSHYWCNN              LYC_SAGOE        69     18     - 
STDYGIFQINSRYWCND              LYC_PONPY        69     18     - 
STDYGIFQINSRYWCND              LYC_HUMAN        69     18     - 
STDYGIFQINSRYWCND              LYC_GORGO        69     18     - 
STDYGIFQINSHYWCNN              LYC_ALLNI        69     18     - 
STDYGIFQINSRYWCNN              LYC_PYGNE        69     18     - 
STDYGIFQINSRYWCND              LYC_HYLLA        69     18     - 
STDYGIFQINSRYWCND              LYCM_MOUSE       69     18     - 
STDYGIFQINSKWWCND              Q27996           69     18     - 
STDYGIFQINSHWWCND              Q29447           69     18     - 
STDYGIFQINSRYWCND              LYC1_RAT         69     18     - 
STDYGIFQINSRYWCND              LYCP_MOUSE       69     18     - 
STDYGILQINSRWWCND              LYC_SYRRE        50     17     - 
STDYGIFQINSRYWCND              LYC1_PIG         49     16     - 
STDYGIFQINSRYWCND              LYC3_PIG         51     18     - 
STDYGILQINSRWWCND              LYC_PHACO        68     17     - 
STDYGILQINSRWWCND              LYC_PHAVE        51     17     - 
STDYGILQINSRWWCND              LYC_CHICK        68     17     - 
STDYGILQINSRWWCND              LYC_CHRAM        50     17     - 
STDYGILQINSRWWCND              LYC_LOPLE        50     17     - 
STDYGIFQINSKWWCND              Q06283           69     18     - 
STDYGIFQINSKWWCND              Q06284           69     18     - 
STDYGIFQINSKWWCND              Q06285           69     18     - 
STDYGIFQINSRYWCND              LYC2_PIG         67     16     - 
STDYGILQINSRWWCND              LYC_COTJA        68     17     - 
STDYGILQINSRWWCND              LYC_PAVCR        50     17     - 
STDYGIFQINSKWWCND              LYC_SHEEP        51     18     - 
STDYGIFQINSKFWCND              LYC1_CAPHI       51     18     - 
STDYGVLQINSRWWCND              LYC_COLVI        50     17     - 
STDYGVLQINSRWWCND              LYC_LOPCA        50     17     - 
STDYGIFQINSKFWCND              LYC2_CAPHI       51     18     - 
STDYGIFQINSRYWCND              LYC2_RAT         69     18     - 
STDYGIFQINSKWWCND              LYC_BOVIN        69     18     - 
STDYGILQINSRWWCND              LYC_MELGA        68     17     - 
STDYGILQINSRWWCND              LYC_ORTVE        50     17     - 
STDYGIFQINSRYWCNN              LYC_CAMDR        51     18     - 
STDYGILQINSRWWCDN              LYC1_ANAPL       68     17     - 
STDYGILEINSRWWCDN              LYC3_ANAPL       50     17     - 
STDYGVLQINSRWWCND              LYC_NUMME        50     17     - 
STDYGIFQINSKWWCDD              LYC_AXIAX        51     18     - 
STDYGIFQINSRYWCDD              LYC2_ONCMY       65     17     - 
STDYGILQINSHYWCDD              LYC_TRIVU        69     18     - 
SYDYGLFQLNSKWWCKD              LYC_EQUAS        51     18     - 
SSDYGLFQLNNKWWCKD              LYC_HORSE        51     18     - 
STDYGIFQINNKYWCDS              LYC_ANOGA        67     17     - 
SSSHGLFQINQPYWCDD              LCA_ORNAN        49     16     - 
SRDYGIFQINSKYWCND              LYC_COLLI        50     17     - 
STEYGLFQINNKIWCKD              LCA_SHEEP        66     16     - 
STEYGLFQINNKIWCKD              LCA_CAPHI        66     16     - 
KTEYGLFQINNKMWCRD              LCA_EQUAS        47     16     - 
STEYGLFQINNKIWCKD              LCA_BOVIN        66     16     - 
KTEYGLFQINNKMWCRD              LCAA_HORSE       47     16     - 
SFDYGLFQINSHYWCND              O75951           69     17     - 
STEYGLFQINNKLWCRD              LCA_PIG          66     16     - 
SRDYGIFQINSKYWCND              LYC_OPIHO        68     16     - 
KTEYGLFEINNKMWCRD              LCAB_HORSE       47     16     - 
NREYGLFQINNKIWCRD              LCA_CAMDR        47     16     - 
SRDYGLFQINDKYWCSN              Q26363           65     18     - 
SKDYGLFQINDRYWCSK              LYC_BOMMO        65     17     - 
STEYGIFQINSKLWCVS              LCA_RABIT        47     16     - 
SKDYGLFQINDKYWCSN              LYC_HYPCU        69     18     - 
SRDYGLFQINDKYWCSK              LYC_HYACE        67     18     - 
HKEYGIFQISSNGWCAE              LCA_TRIVU        66     16     - 
 
Motif 4  width=10
Element                        Seqn Id          St    Int   Rpt 
NACHIPCSAL                     LYCK_SHEEP       75      7     - 
NACHISCNAL                     LYC_PAPAN        93      7     - 
NACHISCNAL                     LYC_MIOTA        93      7     - 
NACHISCNAL                     LYC_MACMU        93      7     - 
NACHISCNAL                     LYC_CERAE        93      7     - 
DACHISCSAL                     P87493           93      7     - 
DACHISCSAL                     LYC_PREEN        93      7     - 
DACHISCSAL                     LYC_NASLA        93      7     - 
NACHIPCSDL                     LYC_RABIT        75      7     - 
NACHISCNAL                     LYC_COLAN        93      7     - 
NACHISCNAL                     LYC_SAISC        93      7     - 
NACHISCNAL                     LYC_CALJA        93      7     - 
NACHISCNAL                     LYC_SAGOE        93      7     - 
NACHLSCSAL                     LYC_PONPY        93      7     - 
NACHLSCSAL                     LYC_HUMAN        93      7     - 
NACHLSCSAL                     LYC_GORGO        93      7     - 
NACRISCNAL                     LYC_ALLNI        93      7     - 
DACHISCSAL                     LYC_PYGNE        93      7     - 
NACHLSCNAL                     LYC_HYLLA        93      7     - 
NACGINCSAL                     LYCM_MOUSE       93      7     - 
NGCGVSCSAL                     Q27996           93      7     - 
NACHLPCGAL                     Q29447           93      7     - 
NACGIPCSAL                     LYC1_RAT         93      7     - 
NACGINCSAL                     LYCP_MOUSE       93      7     - 
NLCHISCSAL                     LYC_SYRRE        74      7     - 
NACHISCKVL                     LYC1_PIG         73      7     - 
NACHISCKVL                     LYC3_PIG         75      7     - 
NLCHIPCSAL                     LYC_PHACO        92      7     - 
NLCHIPCSAL                     LYC_PHAVE        75      7     - 
NLCNIPCSAL                     LYC_CHICK        92      7     - 
NLCHIPCSAL                     LYC_CHRAM        74      7     - 
NLCHIPCSAL                     LYC_LOPLE        74      7     - 
DGCHVSCSEL                     Q06283           93      7     - 
DGCHVSCSEL                     Q06284           93      7     - 
DGCHVSCSEL                     Q06285           93      7     - 
NACHISCKVL                     LYC2_PIG         91      7     - 
NLCNIPCSAL                     LYC_COTJA        92      7     - 
NLCNIPCSAL                     LYC_PAVCR        74      7     - 
DGCHVSCSEL                     LYC_SHEEP        75      7     - 
DGCHVSCSEL                     LYC1_CAPHI       75      7     - 
NLCNIPCSAL                     LYC_COLVI        74      7     - 
NLCNIPCSAL                     LYC_LOPCA        74      7     - 
DGCHVSCSEL                     LYC2_CAPHI       75      7     - 
NACGIPCSAL                     LYC2_RAT         93      7     - 
DGCHVSCREL                     LYC_BOVIN        93      7     - 
NLCNIPCSAL                     LYC_MELGA        92      7     - 
NLCHISCSAL                     LYC_ORTVE        74      7     - 
NGCGINCNVL                     LYC_CAMDR        75      7     - 
NACGIPCSVL                     LYC1_ANAPL       92      7     - 
NACGIPCSVL                     LYC3_ANAPL       74      7     - 
NLCNIPCSAL                     LYC_NUMME        74      7     - 
DGCHVACSEL                     LYC_AXIAX        75      7     - 
NVCGIRCSQL                     LYC2_ONCMY       89      7     - 
NECKVRCSEL                     LYC_TRIVU        93      7     - 
NACNIMCSKL                     LYC_EQUAS        74      6     - 
NACNIMCSKL                     LYC_HORSE        74      6     - 
NDCKIACKNL                     LYC_ANOGA        88      4     - 
NACQIPCSKL                     LCA_ORNAN        76     10     - 
NACNINCSKL                     LYC_COLLI        74      7     - 
NICNISCDKF                     LCA_SHEEP        90      7     - 
NICNISCDKF                     LCA_CAPHI        90      7     - 
NICGISCNKF                     LCA_EQUAS        71      7     - 
NICNISCDKF                     LCA_BOVIN        90      7     - 
NICGISCDKF                     LCAA_HORSE       71      7     - 
NLCHVDCQDL                     O75951           92      6     - 
NICGISCDKF                     LCA_PIG          89      6     - 
DGCHISCSEL                     LYC_OPIHO        92      7     - 
NICGISCNKF                     LCAB_HORSE       71      7     - 
NICDISCDKF                     LCA_CAMDR        71      7     - 
KDCNVKCSDL                     Q26363           87      5     - 
KDCNVKCSDL                     LYC_BOMMO        87      5     - 
NICDTPCENF                     LCA_RABIT        71      7     - 
KDCNVTCADL                     LYC_HYPCU        91      5     - 
KDCNVTCNQL                     LYC_HYACE        89      5     - 
SVCGILCSKL                     LCA_TRIVU        90      7     - 
 
Motif 5  width=16
Element                        Seqn Id          St    Int   Rpt 
LQDDITQAVACAKRVV               LYCK_SHEEP       85      0     - 
LQDNIADAVTCAKRVV               LYC_PAPAN       103      0     - 
LQDNIADAVTCAKRVV               LYC_MIOTA       103      0     - 
LQDNIADAVTCAKRVV               LYC_MACMU       103      0     - 
LQDNIADAVTCAKRVV               LYC_CERAE       103      0     - 
LQNNIADAVACAKRVV               P87493          103      0     - 
LQNNIADAVACAKRVV               LYC_PREEN       103      0     - 
LQNNIADAVACAKRVV               LYC_NASLA       103      0     - 
LKDDITQAVACAKRVV               LYC_RABIT        85      0     - 
LQNNIADAVACAKRVV               LYC_COLAN       103      0     - 
LQDDITQAVACAKRVV               LYC_SAISC       103      0     - 
LQDDITEAVACAKRVV               LYC_CALJA       103      0     - 
LQDDITEAVACAKRVV               LYC_SAGOE       103      0     - 
LQDNIADAVACAKRVV               LYC_PONPY       103      0     - 
LQDNIADAVACAKRVV               LYC_HUMAN       103      0     - 
LQDNIADAVACAKRVV               LYC_GORGO       103      0     - 
LQDNIADAVTCAKRVV               LYC_ALLNI       103      0     - 
LQNNIADAVACAKRVV               LYC_PYGNE       103      0     - 
LQDNIADAVACAKRVV               LYC_HYLLA       103      0     - 
LQDDITAAIQCAKRVV               LYCM_MOUSE      103      0     - 
LKDDITQAVACAKKIV               Q27996          103      0     - 
LQDDITQAVACTKRDV               Q29447          103      0     - 
LQDDITQAIQCAKRVV               LYC1_RAT        103      0     - 
LQDDITAAIQCAKRVV               LYCP_MOUSE      103      0     - 
LSSDITASVNCAKKIV               LYC_SYRRE        84      0     - 
LDDDLSQDIECAKRVV               LYC1_PIG         83      0     - 
LDDDLSQDIECAKRVV               LYC3_PIG         85      0     - 
LSSDITASVNCAKKIV               LYC_PHACO       102      0     - 
LSSDITASVNCAKKIV               LYC_PHAVE        85      0     - 
LSSDITASVNCAKKIV               LYC_CHICK       102      0     - 
LSSDITASVNCAKKIV               LYC_CHRAM        84      0     - 
LSSDITASVNCAKKIV               LYC_LOPLE        84      0     - 
MENDIAKAVACAKHIV               Q06283          103      0     - 
MENDIAKAVACAKHIV               Q06284          103      0     - 
MENDIAKAVACAKQIV               Q06285          103      0     - 
LDDDLSQDIECAKRVV               LYC2_PIG        101      0     - 
LSSDITASVNCAKKIV               LYC_COTJA       102      0     - 
LSSDITASVNCAKKIV               LYC_PAVCR        84      0     - 
MENNIAKAVACAKHIV               LYC_SHEEP        85      0     - 
MENDIEKAVACAKHIV               LYC1_CAPHI       85      0     - 
LSSDITATVNCAKKIV               LYC_COLVI        84      0     - 
LSSDITATVNCAKKIV               LYC_LOPCA        84      0     - 
MENNIAKAVACAKQIV               LYC2_CAPHI       85      0     - 
LQDDITQAIQCAKRVV               LYC2_RAT        103      0     - 
MENDIAKAVACAKHIV               LYC_BOVIN       103      0     - 
LSSDITASVNCAKKIA               LYC_MELGA       102      0     - 
MGADIAPSVRCAKRIV               LYC_ORTVE        84      0     - 
LEDDITKAVQCAKRVV               LYC_CAMDR        85      0     - 
LRSDITEAVRCAKRIV               LYC1_ANAPL      102      0     - 
LRSDITEAVKCAKRIV               LYC3_ANAPL       84      0     - 
QSSDITATANCAKKIV               LYC_NUMME        84      0     - 
MENNIDKAVTCAKQIV               LYC_AXIAX        85      0     - 
LTADLTVAIRCAKRVV               LYC2_ONCMY       99      0     - 
QEDDLVKAVNCAKKIV               LYC_TRIVU       103      0     - 
LDDNIDDDISCAKRVV               LYC_EQUAS        84      0     - 
LDENIDDDISCAKRVV               LYC_HORSE        84      0     - 
LNDDITDDIKCAKLIH               LYC_ANOGA        98      0     - 
LDDDILDDIECAKKIV               LCA_ORNAN        86      0     - 
RDDNIADDIQCAKKIA               LYC_COLLI        84      0     - 
LDDDLTDDIVCAKKIL               LCA_SHEEP       100      0     - 
LDDDLTDDIVCAKKIL               LCA_CAPHI       100      0     - 
LDDDLTDDVMCAKKIL               LCA_EQUAS        81      0     - 
LDDDLTDDIMCVKKIL               LCA_BOVIN       100      0     - 
LDDDLTDDVMCAKKIL               LCAA_HORSE       81      0     - 
LNPNLLAGIHCAKRIV               O75951          102      0     - 
LDDDLTDDMMCAKKIL               LCA_PIG          99      0     - 
MTNDLEDDIKCAKKIA               LYC_OPIHO       102      0     - 
LDDDLTDDVMCAKKDL               LCAB_HORSE       81      0     - 
LDDDLTDDKMCAKKIL               LCA_CAMDR        81      0     - 
LIDDITKASTCAKKIY               Q26363           97      0     - 
LTDDITKAAKCAKKIY               LYC_BOMMO        97      0     - 
LDDNLTDDVKCAMKIL               LCA_RABIT        81      0     - 
LLDDITKASTCAKKIF               LYC_HYPCU       101      0     - 
LTDDISVAATCAKKIY               LYC_HYACE        99      0     - 
LDDDITDDIVCAKKIL               LCA_TRIVU       100      0     - 
 
Motif 6  width=12
Element                        Seqn Id          St    Int   Rpt 
GIRAWVAWRSHC                   LYCK_SHEEP      105      4     - 
GIRAWVAWRNHC                   LYC_PAPAN       123      4     - 
GIRAWVAWRNHC                   LYC_MIOTA       123      4     - 
GIRAWVAWRNHC                   LYC_MACMU       123      4     - 
GIRAWVAWRNHC                   LYC_CERAE       123      4     - 
GIRAWVAWRNHC                   P87493          123      4     - 
GIRAWVAWRNHC                   LYC_PREEN       123      4     - 
GIRAWVAWRNHC                   LYC_NASLA       123      4     - 
GIRAWVAWRNHC                   LYC_RABIT       105      4     - 
GIRAWVAWKKHC                   LYC_COLAN       123      4     - 
GIRAWVAWKAHC                   LYC_SAISC       123      4     - 
GIRAWVAWKAHC                   LYC_CALJA       123      4     - 
GIRAWVAWKAHC                   LYC_SAGOE       123      4     - 
GIRAWVAWRNRC                   LYC_PONPY       123      4     - 
GIRAWVAWRNRC                   LYC_HUMAN       123      4     - 
GIRAWVAWRNRC                   LYC_GORGO       123      4     - 
GIRAWVAWRNHC                   LYC_ALLNI       123      4     - 
GVRAWVAWRNHC                   LYC_PYGNE       123      4     - 
GIRAWVAWRNRC                   LYC_HYLLA       123      4     - 
GIRAWVAWRAHC                   LYCM_MOUSE      123      4     - 
GITAWVAWKNKC                   Q27996          122      3     - 
GIRAWVAWRSHC                   Q29447          123      4     - 
GIRAWVAWQRHC                   LYC1_RAT        123      4     - 
GIRAWVAWRTQC                   LYCP_MOUSE      123      4     - 
GMNAWVAWRNRC                   LYC_SYRRE       104      4     - 
GIKAWVAWRTHC                   LYC1_PIG        103      4     - 
GIKAWVAWKAHC                   LYC3_PIG        105      4     - 
GMNAWVAWRKHC                   LYC_PHACO       122      4     - 
GMNAWVAWRKHC                   LYC_PHAVE       105      4     - 
GMNAWVAWRNRC                   LYC_CHICK       122      4     - 
GMNAWVAWRNRC                   LYC_CHRAM       104      4     - 
GMNAWVAWRNRC                   LYC_LOPLE       104      4     - 
GITAWVAWKSHC                   Q06283          122      3     - 
GITAWVAWKSHC                   Q06284          122      3     - 
GITAWVAWKSHC                   Q06285          122      3     - 
GVKAWVAWRAHC                   LYC2_PIG        121      4     - 
GMNAWVAWRNRC                   LYC_COTJA       122      4     - 
GMNAWVAWRNRC                   LYC_PAVCR       104      4     - 
GITAWVAWKSHC                   LYC_SHEEP       104      3     - 
GITAWVAWKSHC                   LYC1_CAPHI      104      3     - 
GMNAWVAWRNRC                   LYC_COLVI       104      4     - 
GMNAWVAWRNRC                   LYC_LOPCA       104      4     - 
GITAWVAWKSHC                   LYC2_CAPHI      104      3     - 
GIRAWVAWQRHC                   LYC2_RAT        123      4     - 
GITAWVAWKSHC                   LYC_BOVIN       122      3     - 
GMNAWVAWRNRC                   LYC_MELGA       122      4     - 
GMNAWVAWRKHC                   LYC_ORTVE       104      4     - 
GVRAWVAWKNHC                   LYC_CAMDR       105      4     - 
GMNAWVAWRNRC                   LYC1_ANAPL      122      4     - 
GMNAWVAWRNRC                   LYC3_ANAPL      104      4     - 
GMNAWVAWRKHC                   LYC_NUMME       104      4     - 
GITAWVAWKSHC                   LYC_AXIAX       104      3     - 
GIGAWVAWRLHC                   LYC2_ONCMY      119      4     - 
GIRAWVAWRNKC                   LYC_TRIVU       122      3     - 
GMSAWKAWVKHC                   LYC_EQUAS       104      4     - 
GMSAWKAWVKHC                   LYC_HORSE       104      4     - 
GFNAWYGWKNHC                   LYC_ANOGA       117      3     - 
GITAWEAWQPFC                   LCA_ORNAN       106      4     - 
GLTPWVAWKKYC                   LYC_COLLI       104      4     - 
GINYWLAHKALC                   LCA_SHEEP       119      3     - 
GINYWLAHKALC                   LCA_CAPHI       119      3     - 
GIDYWLAHKPLC                   LCA_EQUAS       100      3     - 
GINYWLAHKALC                   LCA_BOVIN       119      3     - 
GIDYWLAHKPLC                   LCAA_HORSE      100      3     - 
GMNNWVEWRLHC                   O75951          122      4     - 
GIDYWLAHKALC                   LCA_PIG         118      3     - 
GLTPWYGWKNHC                   LYC_OPIHO       122      4     - 
GIDYWLAHKPLC                   LCAB_HORSE      100      3     - 
GIDYWLAHKPLC                   LCA_CAMDR       100      3     - 
KFQAWYGWRNHC                   Q26363          116      3     - 
RFDAWYGWKNHC                   LYC_BOMMO       116      3     - 
GIDHWLAHKPLC                   LCA_RABIT       100      3     - 
NFRAWYGWRNHC                   LYC_HYPCU       120      3     - 
KFDAWYGWKNHC                   LYC_HYACE       118      3     - 
RLDHWKAHNTFC                   LCA_TRIVU       120      4     -