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PR01626

Identifier
LCACHANNELB  [View Relations]  [View Alignment]  
Accession
PR01626
No. of Motifs
9
Creation Date
19-DEC-2001
Title
L-type calcium channel beta subunit signature
Database References
PRINTS; PR00167 CACHANNEL; PR01627 LCACHANNELB1; PR01628 LCACHANNELB2
PRINTS; PR01696 LCACHANNELB3
PFAM; PF00774 Ca_channel_B
INTERPRO; IPR000584
Literature References
1. PICHLER, M., CASSIDY, T.N., REIMER, D., HAASE, H., KRAUS, R., OSTLER, D.
AND STRIESSNIG, J.
Beta subunit heterogeneity in neuronal L-type calcium channels.
J.BIOL.CHEM. 272(21) 13877-13882 (1997).
 
2. BRAMMAR, W.J.
VLG Ca.
IN THE ION CHANNEL FACTSBOOK, VOLUME IV, ACADEMIC PRESS, 1999, PP.22-153.

Documentation
Calcium channels are generally discriminated by their biophysical and/or
pharmacological sensitivity. L-type calcium channels are distinguished by
their modulation by compounds such as dihydropyridines. These channels
tend to be localised mainly around the neuronal cell body, where they
influence calcium-dependent modulation and excitation-transcription coupling,
but are also found in skeletal and cardiac muscle, where they play a role in
excitation-contraction coupling and action potential shaping, respectively.
 
L-type calcium channnels are formed from different alpha-1 subunit isoforms
that determine the pharmacological properties of the channel, since they
form the drug binding domain. Other properties, such as gating voltage-
dependence, G protein modulation and kinase susceptibility, are influenced 
by alpha-2, delta and beta subunits [1].
 
Co-expression of beta subunit mRNA with alpha-1 subunit mRNA in xenopus
oocytes produces increased calcium currents, which are accompanied by a
shift in the voltage-dependence of activation to more negative membrane
potentials. Conversely, microinjection of antisense oligonucleotides to 
beta subunit mRNA produces decreased calcium currents and shifts voltage-
dependent activation to more positive membrane potentials. There are
four distinct beta subunits: beta-1, beta-2, beta-3 and beta-4; and the
magnitude of these effects varies with the particular subtype [2].
 
LCACHANNELB is a 9-element fingerprint that provides a signature for the
L-type calcium channel beta subunits. The fingerprint was derived from an
initial alignment of 16 sequences: the motifs were drawn from conserved
regions spanning the central portion of the alignment. Two iterations on
SPTR40_18f were required to reach convergence, at which point a true set
comprising 34 sequences was identified. A single partial match was also
found, Q9QVV4, a beta-2 subunit that appears to be truncated at the
N-terminal end.
Summary Information
  34 codes involving  9 elements
0 codes involving 8 elements
0 codes involving 7 elements
0 codes involving 6 elements
0 codes involving 5 elements
1 codes involving 4 elements
0 codes involving 3 elements
0 codes involving 2 elements
Composite Feature Index
9343434343434343434
8000000000
7000000000
6000000000
5000000000
4000001111
3000000000
2000000000
123456789
True Positives
CCB2_HUMAN    CCB2_RABIT    CCB3_HUMAN    CCB3_MOUSE    
CCB3_RABIT CCB3_RAT CCB4_HUMAN CCBA_HUMAN
CCBA_RAT CCBB_HUMAN CCBC_HUMAN CCBC_RABIT
O00304 O01661 O15331 O44222
O57653 Q91629 Q91630 Q9BWU2
Q9C085 Q9EPT9 Q9MZL3 Q9MZL5
Q9MZL6 Q9MZL7 Q9QUU7 Q9QVV3
Q9QWL3 Q9TS08 Q9U0D3 Q9VKI5
Q9Y340 Q9Y341
True Positive Partials
Codes involving 4 elements
Q9QVV4
Sequence Titles
CCB2_HUMAN  Dihydropyridine-sensitive L-type, calcium channel beta-2 subunit (Lambert-Eaton myasthenic syndrome antigen B) (MYSB) - Homo sapiens (Human). 
CCB2_RABIT Dihydropyridine-sensitive L-type, calcium channel beta-2 subunit (CAB2) - Oryctolagus cuniculus (Rabbit).
CCB3_HUMAN Dihydropyridine-sensitive L-type, calcium channel beta-3 subunit (CAB3A/CAB3B) - Homo sapiens (Human).
CCB3_MOUSE Dihydropyridine-sensitive L-type, calcium channel beta-3 subunit (CAB3A/CAB3B) (CCHB3) - Mus musculus (Mouse).
CCB3_RABIT Dihydropyridine-sensitive L-type, calcium channel beta-3 subunit (CAB3) - Oryctolagus cuniculus (Rabbit).
CCB3_RAT Dihydropyridine-sensitive L-type, calcium channel beta-3 subunit - Rattus norvegicus (Rat).
CCB4_HUMAN Voltage-dependent calcium channel beta-4 subunit - Homo sapiens (Human).
CCBA_HUMAN Dihydropyridine-sensitive L-type, channel beta-1-B2 subunit (Beta-1 isoform A) - Homo sapiens (Human).
CCBA_RAT Dihydropyridine-sensitive L-type, channel beta-1-B2 subunit (Beta-1 isoform A) - Rattus norvegicus (Rat).
CCBB_HUMAN Dihydropyridine-sensitive L-type, calcium channel beta-1-B1 subunit (Beta-1 isoform B) (Beta-2) (Beta-1C) - Homo sapiens (Human).
CCBC_HUMAN Dihydropyridine-sensitive L-type, calcium channel beta-1M subunit (Beta-1 isoform C) (Beta-1A) - Homo sapiens (Human).
CCBC_RABIT Dihydropyridine-sensitive L-type, calcium channel beta-1M subunit (Beta-1 isoform C) - Oryctolagus cuniculus (Rabbit).
O00304 VOLTAGE-DEPENDENT CALCIUM CHANNEL BETA-2C SUBUNIT - Homo sapiens (Human).
O01661 DIHYDROPYRIDINE-SENSITIVE L-TYPE, CALCIUM CHANNEL BETA-2 SUBUNIT - Caenorhabditis elegans.
O15331 DIHYDROPYRIDINE-SENSITIVE L-TYPE, CALCIUM CHANNEL BETA-1B SUBUNIT - Homo sapiens (Human).
O44222 VOLTAGE-GATED CALCIUM CHANNEL BETA SUBUNIT - Cyanea capillata (Lion's mane jellyfish).
O57653 CALCIUM CHANNEL BETA3 SUBUNIT - Fugu rubripes (Japanese pufferfish) (Takifugu rubripes).
Q91629 DIHYDROPYRIDINE-SENSITIVE L-TYPE, CALCIUM CHANNEL BETA-3 XO28 SUBUNIT - Xenopus laevis (African clawed frog).
Q91630 DIHYDROPYRIDINE-SENSITIVE L-TYPE, CALCIUM CHANNEL BETA-3 XO32 SUBUNIT - Xenopus laevis (African clawed frog).
Q9BWU2 VOLTAGE-DEPENDENT CALCIUM CHANNEL BETA 2 SUBUNIT - Homo sapiens (Human).
Q9C085 VOLTAGE-DEPENDENT CALCIUM CHANNEL BETA-1B SUBUNIT - Homo sapiens (Human).
Q9EPT9 L-TYPE CALCIUM CHANNEL BETA 1A SUBUNIT - Mus musculus (Mouse).
Q9MZL3 VOLTAGE-DEPENDENT CALCIUM CHANNEL BETA3A SUBUNIT - Bos taurus (Bovine).
Q9MZL5 VOLTAGE-DEPENDENT CALCIUM CHANNEL BETA2A SUBUNIT - Bos taurus (Bovine).
Q9MZL6 VOLTAGE-DEPENDENT CALCIUM CHANNEL BETA1C SUBUNIT - Bos taurus (Bovine).
Q9MZL7 VOLTAGE-DEPENDENT CALCIUM CHANNEL BETA1B SUBUNIT - Bos taurus (Bovine).
Q9QUU7 BETA SUBUNIT OF L-TYPE CALCIUM CHANNEL (CALCIUM CHANNEL L-TYPE BETA 2 SUBUNIT) - Rattus sp., and Rattus norvegicus (Rat).
Q9QVV3 CA2+ CHANNEL BETA SUBUNIT 3B - Rattus sp.
Q9QWL3 L-TYPE CALCIUM CHANNEL BETA SUBUNIT - Cavia porcellus (Guinea pig).
Q9TS08 CA2+ CHANNEL BETA SUBUNIT 2C - Oryctolagus cuniculus (Rabbit).
Q9U0D3 CALCIUM CHANNEL BETA SUBUNIT - Drosophila melanogaster (Fruit fly).
Q9VKI5 CG6320 PROTEIN - Drosophila melanogaster (Fruit fly).
Q9Y340 CALCIUM CHANNEL BETA2C SUBUNIT - Homo sapiens (Human).
Q9Y341 CALCIUM CHANNEL BETA2A SUBUNIT - Homo sapiens (Human).

Q9QVV4 CA2+ CHANNEL BETA SUBUNIT 2D - Rattus sp.
Scan History
SPTR40_18f 2  80   NSINGLE    
Initial Motifs
Motif 1  width=15
Element Seqn Id St Int Rpt
PYDVVPSMRPVVLVG CCB2_HUMAN 274 274 -
PYDVVPSMRPVVLVG Q9QWL3 220 220 -
PYDVVPSMRPVVLVG Q9TS08 44 44 -
PYDVVPSMRPVVLVG CCB2_RABIT 246 246 -
PYDVVPSMRPVVLVG Q9Y340 273 273 -
PYDVVPSMRPIILVG CCBA_HUMAN 222 222 -
PYDVVPSMRPIILVG CCBB_HUMAN 222 222 -
PYDVVPSMRPIILVG Q9EPT9 267 267 -
PYDVVPSMRPIILVG Q9MZL7 222 222 -
PYDVVPSMRPIILVG CCBC_RABIT 267 267 -
PYDVVPSMRPVVLVG CCB3_HUMAN 170 170 -
PYDVVPSMRPVVLVG CCB3_RABIT 170 170 -
PYDVVPSMRPVVLVG CCB3_RAT 170 170 -
PYDVVPSMRPVVLVG O57653 216 216 -
PYDVVPSMRPVVLVG Q91629 167 167 -
PYDVVPSMRPVIFVG O44222 220 220 -

Motif 2 width=15
Element Seqn Id St Int Rpt
PSLKGYEVTDMMQKA CCB2_HUMAN 289 0 -
PSLKGYEVTDMMQKA Q9QWL3 235 0 -
PSLKGYEVTDMMQKA Q9TS08 59 0 -
PSLKGYEVTDMMQKA CCB2_RABIT 261 0 -
PSLKGYEVTDMMQKA Q9Y340 288 0 -
PSLKGYEVTDMMQKA CCBA_HUMAN 237 0 -
PSLKGYEVTDMMQKA CCBB_HUMAN 237 0 -
PSLKGYEVTDMMQKA Q9EPT9 282 0 -
PSLKGYEVTDMMQKA Q9MZL7 237 0 -
PSLKGYEVTDMMQKA CCBC_RABIT 282 0 -
PSLKGYEVTDMMQKA CCB3_HUMAN 185 0 -
PSLKGYEVTDMMQKA CCB3_RABIT 185 0 -
PSLKGYEVTDMMQKA CCB3_RAT 185 0 -
PSLKGYEVTDMMQKA O57653 231 0 -
PSLKGYEVTDMMQKA Q91629 182 0 -
PSLKGYEVTDMMQKA O44222 235 0 -

Motif 3 width=16
Element Seqn Id St Int Rpt
LFDFLKHRFEGRISIT CCB2_HUMAN 304 0 -
LFDFLKHRFEGRISIT Q9QWL3 250 0 -
LFDFLKHRFEGRISIT Q9TS08 74 0 -
LFDFLKHRFEGRISIT CCB2_RABIT 276 0 -
LFDFLKHRFEGRISIT Q9Y340 303 0 -
LFDFLKHRFDGRISIT CCBA_HUMAN 252 0 -
LFDFLKHRFDGRISIT CCBB_HUMAN 252 0 -
LFDFLKHRFDGRISIT Q9EPT9 297 0 -
LFDFLKHRFDGRISIT Q9MZL7 252 0 -
LFDFLKHLFDGRISIT CCBC_RABIT 297 0 -
LFDFLKHRFDGRISIT CCB3_HUMAN 200 0 -
LFDFLKHRFDGRISIT CCB3_RABIT 200 0 -
LFDFLKHRFDGRISIT CCB3_RAT 200 0 -
LFDFLKHRFEGRISIT O57653 246 0 -
LFDFLKHRFDGRISIT Q91629 197 0 -
LFDYLKHRFQGRIVIT O44222 250 0 -

Motif 4 width=15
Element Seqn Id St Int Rpt
RVTADISLAKRSVLN CCB2_HUMAN 320 0 -
RVTADISLAKRSVLN Q9QWL3 266 0 -
RVTADISLAKRSVLN Q9TS08 90 0 -
RVTADISLAKRSVLN CCB2_RABIT 292 0 -
RVTADISLAKRSVLN Q9Y340 319 0 -
RVTADISLAKRSVLN CCBA_HUMAN 268 0 -
RVTADISLAKRSVLN CCBB_HUMAN 268 0 -
RVTADISLAKRSVLN Q9EPT9 313 0 -
RVTADISLAKRSVLN Q9MZL7 268 0 -
RVTADISLAKRSVLN CCBC_RABIT 313 0 -
RVTADLSLAKRSVLN CCB3_HUMAN 216 0 -
RVTADLSLAKRSVLN CCB3_RABIT 216 0 -
RVTADLSLAKRSVLN CCB3_RAT 216 0 -
RVTADLSLAKRSVLN O57653 262 0 -
RVTADLSLAKRSVLN Q91629 213 0 -
RVTADISTAKKSTIQ O44222 266 0 -

Motif 5 width=15
Element Seqn Id St Int Rpt
EVQSEIERIFELART CCB2_HUMAN 353 18 -
EVQSEIERIFELART Q9QWL3 299 18 -
EVQSEIERIFELART Q9TS08 123 18 -
EVQSEIERIFELART CCB2_RABIT 325 18 -
EVQSEIERIFEVART Q9Y340 352 18 -
EVQSEIERIFELART CCBA_HUMAN 301 18 -
EVQSEIERIFELART CCBB_HUMAN 301 18 -
EVQSEIERIFELART Q9EPT9 346 18 -
EVQSEIERIFELART Q9MZL7 301 18 -
EVQSEIERIFELART CCBC_RABIT 346 18 -
EVQSEIERIFELAKS CCB3_HUMAN 249 18 -
EVQSEIERIFELAKS CCB3_RABIT 249 18 -
EVQSEIERIFELAKS CCB3_RAT 249 18 -
EVQSEIERIFELAKS O57653 292 15 -
EVQSEIERIFELSKT Q91629 246 18 -
EVNQEIERIFELCRN O44222 299 18 -

Motif 6 width=16
Element Seqn Id St Int Rpt
LQLVVLDADTINHPAQ CCB2_HUMAN 368 0 -
LQLVVLDADTINHPAQ Q9QWL3 314 0 -
LQLVVLDADTINHPAQ Q9TS08 138 0 -
LQLVVLDADTINHPAQ CCB2_RABIT 340 0 -
LQLVVLDADTINHPAQ Q9Y340 367 0 -
LQLVALDADTINHPAQ CCBA_HUMAN 316 0 -
LQLVALDADTINHPAQ CCBB_HUMAN 316 0 -
LQLVALDADTINHPAQ Q9EPT9 361 0 -
LQLVALDADTINHPAQ Q9MZL7 316 0 -
LQLVALDADTINHPAQ CCBC_RABIT 361 0 -
LQLVVLDADTINHPAQ CCB3_HUMAN 264 0 -
LQLVVLDADTINHPAQ CCB3_RABIT 264 0 -
LQLVVLDADTINHPAQ CCB3_RAT 264 0 -
LQLVILDADTINHPAQ O57653 307 0 -
LQLVILDADTINHPTQ Q91629 261 0 -
LQLVVLDSYTVNYPAQ O44222 314 0 -

Motif 7 width=17
Element Seqn Id St Int Rpt
KTSLAPIIVYVKISSPK CCB2_HUMAN 386 2 -
KTSLAPIIVYVKISSPK Q9QWL3 332 2 -
KTSLAPIIVYVKISSPK Q9TS08 156 2 -
KTSLAPIVVYVKISSPK CCB2_RABIT 358 2 -
KTSLAPIIVYVKISSPK Q9Y340 385 2 -
KTSLAPIIVYIKITSPK CCBA_HUMAN 334 2 -
KTSLAPIIVYIKITSPK CCBB_HUMAN 334 2 -
KTSLAPIIVYIKITSPK Q9EPT9 379 2 -
KTSLAPIIVYIKITSPK Q9MZL7 334 2 -
KTSLAPIIVYIKITSPK CCBC_RABIT 379 2 -
KTSLAPIIVFVKVSSPK CCB3_HUMAN 282 2 -
KTSLAPIIVFVKVSSPK CCB3_RABIT 282 2 -
KTSLAPIIVFVKVSSPK CCB3_RAT 282 2 -
KTSLAPIVVYVKVSSPK O57653 325 2 -
KTSLAPIIVFVKVSSPK Q91629 279 2 -
KTSLAPIIVYIKISSPK O44222 332 2 -

Motif 8 width=16
Element Seqn Id St Int Rpt
LIKSRGKSQAKHLNVQ CCB2_HUMAN 407 4 -
LIKSRGKSQAKHLNVQ Q9QWL3 353 4 -
LIKSRGKSQAKHLNVQ Q9TS08 177 4 -
LIKSRGKSQAKHLNVQ CCB2_RABIT 379 4 -
LIKSRGKSQAKHLNVQ Q9Y340 406 4 -
LIKSRGKSQSKHLNVQ CCBA_HUMAN 355 4 -
LIKSRGKSQSKHLNVQ CCBB_HUMAN 355 4 -
LIKSRGKSQSKHLNVQ Q9EPT9 400 4 -
LIKSRGKSQSKHLNVQ Q9MZL7 355 4 -
LIKSRGKSQSKHLNVQ CCBC_RABIT 400 4 -
LIRSRGKSQMKHLTVQ CCB3_HUMAN 303 4 -
LIRSRGKSQMKHLTVQ CCB3_RABIT 303 4 -
LIRSRGKSQMKHLTVQ CCB3_RAT 303 4 -
LVKSRGKSQSKHLNVQ O57653 346 4 -
LIKSRGKSQVKHLNVQ Q91629 300 4 -
LVKSRGKSQSKNLNVQ O44222 353 4 -

Motif 9 width=12
Element Seqn Id St Int Rpt
MVAADKLAQCPP CCB2_HUMAN 423 0 -
MVAADKLAQCPP Q9QWL3 369 0 -
MVAADKLAQCPP Q9TS08 193 0 -
MVAADKLAQCPP CCB2_RABIT 395 0 -
MVAADKLAQCPP Q9Y340 422 0 -
IAASEKLAQCPP CCBA_HUMAN 371 0 -
IAASEKLAQCPP CCBB_HUMAN 371 0 -
IAASEKLAQCPP Q9EPT9 416 0 -
IAASEKLAQCPP Q9MZL7 371 0 -
IAASEKLAQCPP CCBC_RABIT 416 0 -
MMAYDKLVQCPP CCB3_HUMAN 319 0 -
MMAYDKLVQCPP CCB3_RABIT 319 0 -
MMAYDKLVQCPP CCB3_RAT 319 0 -
MMAADKLSQCPP O57653 362 0 -
MLAADKLIQCPP Q91629 316 0 -
LVAAVKLGQCSE O44222 369 0 -
Final Motifs
Motif 1  width=15
Element Seqn Id St Int Rpt
PYDVVPSMRPVVLVG CCB2_HUMAN 274 274 -
PYDVVPSMRPVVLVG O00304 219 219 -
PYDVVPSMRPVVLVG Q9BWU2 219 219 -
PYDVVPSMRPVVLVG Q9MZL5 219 219 -
PYDVVPSMRPVVLVG Q9QUU7 219 219 -
PYDVVPSMRPVVLVG Q9QWL3 220 220 -
PYDVVPSMRPVVLVG Q9TS08 44 44 -
PYDVVPSMRPVVLVG CCB2_RABIT 246 246 -
PYDVVPSMRPVVLVG Q9Y340 273 273 -
PYDVVPSMRPVVLVG Q9Y341 219 219 -
PYDVVPSMRPIILVG CCBA_HUMAN 222 222 -
PYDVVPSMRPIILVG CCBA_RAT 222 222 -
PYDVVPSMRPIILVG CCBB_HUMAN 222 222 -
PYDVVPSMRPIILVG CCBC_HUMAN 267 267 -
PYDVVPSMRPIILVG O15331 267 267 -
PYDVVPSMRPIILVG Q9C085 222 222 -
PYDVVPSMRPIILVG Q9EPT9 267 267 -
PYDVVPSMRPIILVG Q9MZL6 222 222 -
PYDVVPSMRPIILVG Q9MZL7 222 222 -
PYDVVPSMRPVVLVG CCB4_HUMAN 212 212 -
PYDVVPSMRPIILVG CCBC_RABIT 267 267 -
PYDVVPSMRPVVLVG CCB3_HUMAN 170 170 -
PYDVVPSMRPVVLVG CCB3_MOUSE 170 170 -
PYDVVPSMRPVVLVG CCB3_RABIT 170 170 -
PYDVVPSMRPVVLVG CCB3_RAT 170 170 -
PYDVVPSMRPVVLVG Q9MZL3 170 170 -
PYDVVPSMRPVVLVG O57653 216 216 -
PYDVVPSMRPVVLVG Q91629 167 167 -
PVDVVPSMRPVVLVG Q9QVV3 163 163 -
PYDVVPSMRPVVLVG Q91630 167 167 -
PYDVVPSMRPVVLVG Q9U0D3 201 201 -
PYDVVPSMRPVVLVG Q9VKI5 305 305 -
PYDVVPSMRPVVLVG O01661 192 192 -
PYDVVPSMRPVIFVG O44222 220 220 -

Motif 2 width=15
Element Seqn Id St Int Rpt
PSLKGYEVTDMMQKA CCB2_HUMAN 289 0 -
PSLKGYEVTDMMQKA O00304 234 0 -
PSLKGYEVTDMMQKA Q9BWU2 234 0 -
PSLKGYEVTDMMQKA Q9MZL5 234 0 -
PSLKGYEVTDMMQKA Q9QUU7 234 0 -
PSLKGYEVTDMMQKA Q9QWL3 235 0 -
PSLKGYEVTDMMQKA Q9TS08 59 0 -
PSLKGYEVTDMMQKA CCB2_RABIT 261 0 -
PSLKGYEVTDMMQKA Q9Y340 288 0 -
PSLKGYEVTDMMQKA Q9Y341 234 0 -
PSLKGYEVTDMMQKA CCBA_HUMAN 237 0 -
PSLKGYEVTDMMQKA CCBA_RAT 237 0 -
PSLKGYEVTDMMQKA CCBB_HUMAN 237 0 -
PSLKGYEVTDMMQKA CCBC_HUMAN 282 0 -
PSLKGYEVTDMMQKA O15331 282 0 -
PSLKGYEVTDMMQKA Q9C085 237 0 -
PSLKGYEVTDMMQKA Q9EPT9 282 0 -
PSLKGYEVTDMMQKA Q9MZL6 237 0 -
PSLKGYEVTDMMQKA Q9MZL7 237 0 -
PSLKGYEVTDMMQKA CCB4_HUMAN 227 0 -
PSLKGYEVTDMMQKA CCBC_RABIT 282 0 -
PSLKGYEVTDMMQKA CCB3_HUMAN 185 0 -
PSLKGYEVTDMMQKA CCB3_MOUSE 185 0 -
PSLKGYEVTDMMQKA CCB3_RABIT 185 0 -
PSLKGYEVTDMMQKA CCB3_RAT 185 0 -
PSLKGYEVTDMMQKA Q9MZL3 185 0 -
PSLKGYEVTDMMQKA O57653 231 0 -
PSLKGYEVTDMMQKA Q91629 182 0 -
PSLKGYEVTDMMQKA Q9QVV3 178 0 -
PSLKGYEVTDMMQKA Q91630 182 0 -
PSLKGYEVTDMMQKA Q9U0D3 216 0 -
PSLKGYEVTDMMQKA Q9VKI5 320 0 -
PSLKGYEVTDMMQKA O01661 207 0 -
PSLKGYEVTDMMQKA O44222 235 0 -

Motif 3 width=16
Element Seqn Id St Int Rpt
LFDFLKHRFEGRISIT CCB2_HUMAN 304 0 -
LFDFLKHRFEGRISIT O00304 249 0 -
LFDFLKHRFEGRISIT Q9BWU2 249 0 -
LFDFLKHRFEGRISIT Q9MZL5 249 0 -
LFDFLKHRFEGRISIT Q9QUU7 249 0 -
LFDFLKHRFEGRISIT Q9QWL3 250 0 -
LFDFLKHRFEGRISIT Q9TS08 74 0 -
LFDFLKHRFEGRISIT CCB2_RABIT 276 0 -
LFDFLKHRFEGRISIT Q9Y340 303 0 -
LFDFLKHRFEGRISIT Q9Y341 249 0 -
LFDFLKHRFDGRISIT CCBA_HUMAN 252 0 -
LFDFLKHRFDGRISIT CCBA_RAT 252 0 -
LFDFLKHRFDGRISIT CCBB_HUMAN 252 0 -
LFDFLKHRFDGRISIT CCBC_HUMAN 297 0 -
LFDFLKHRFDGRISIT O15331 297 0 -
LFDFLKHRFDGRISIT Q9C085 252 0 -
LFDFLKHRFDGRISIT Q9EPT9 297 0 -
LFDFLKHRFDGRISIT Q9MZL6 252 0 -
LFDFLKHRFDGRISIT Q9MZL7 252 0 -
LFDSLKHRFDGRISIT CCB4_HUMAN 242 0 -
LFDFLKHLFDGRISIT CCBC_RABIT 297 0 -
LFDFLKHRFDGRISIT CCB3_HUMAN 200 0 -
LFDFLKHRFDGRISIT CCB3_MOUSE 200 0 -
LFDFLKHRFDGRISIT CCB3_RABIT 200 0 -
LFDFLKHRFDGRISIT CCB3_RAT 200 0 -
LFDFLKHRFDGRISIT Q9MZL3 200 0 -
LFDFLKHRFEGRISIT O57653 246 0 -
LFDFLKHRFDGRISIT Q91629 197 0 -
LFDFLKHRFDGRISIT Q9QVV3 193 0 -
LFDFMRHRFDGRISIT Q91630 197 0 -
LFDFLKHRFEGRIIIT Q9U0D3 231 0 -
LFDFLKHRFEGRIIIT Q9VKI5 335 0 -
VFDYLKHRFEGRIIIT O01661 222 0 -
LFDYLKHRFQGRIVIT O44222 250 0 -

Motif 4 width=15
Element Seqn Id St Int Rpt
RVTADISLAKRSVLN CCB2_HUMAN 320 0 -
RVTADISLAKRSVLN O00304 265 0 -
RVTADISLAKRSVLN Q9BWU2 265 0 -
RVTADISLAKRSVLN Q9MZL5 265 0 -
RVTADISLAKRSVLN Q9QUU7 265 0 -
RVTADISLAKRSVLN Q9QWL3 266 0 -
RVTADISLAKRSVLN Q9TS08 90 0 -
RVTADISLAKRSVLN CCB2_RABIT 292 0 -
RVTADISLAKRSVLN Q9Y340 319 0 -
RVTADISLAKRSVLN Q9Y341 265 0 -
RVTADISLAKRSVLN CCBA_HUMAN 268 0 -
RVTADISLAKRSVLN CCBA_RAT 268 0 -
RVTADISLAKRSVLN CCBB_HUMAN 268 0 -
RVTADISLAKRSVLN CCBC_HUMAN 313 0 -
RVTADISLAKRSVLN O15331 313 0 -
RVTADISLAKRSVLN Q9C085 268 0 -
RVTADISLAKRSVLN Q9EPT9 313 0 -
RVTADISLAKRSVLN Q9MZL6 268 0 -
RVTADISLAKRSVLN Q9MZL7 268 0 -
RVTADISLAKRSVLN CCB4_HUMAN 258 0 -
RVTADISLAKRSVLN CCBC_RABIT 313 0 -
RVTADLSLAKRSVLN CCB3_HUMAN 216 0 -
RVTADLSLAKRSVLN CCB3_MOUSE 216 0 -
RVTADLSLAKRSVLN CCB3_RABIT 216 0 -
RVTADLSLAKRSVLN CCB3_RAT 216 0 -
RVTADLSLAKRSVLN Q9MZL3 216 0 -
RVTADLSLAKRSVLN O57653 262 0 -
RVTADLSLAKRSVLN Q91629 213 0 -
RVTADLSLAKRSVLN Q9QVV3 209 0 -
RVTADLSLAKRSVLN Q91630 213 0 -
RVMADISLAKRSIMN Q9U0D3 247 0 -
RVMADISLAKRSIMN Q9VKI5 351 0 -
RVTADISLAKRSLLN O01661 238 0 -
RVTADISTAKKSTIQ O44222 266 0 -

Motif 5 width=15
Element Seqn Id St Int Rpt
EVQSEIERIFELART CCB2_HUMAN 353 18 -
EVQSEIERIFELART O00304 298 18 -
EVQSEIERIFELART Q9BWU2 298 18 -
EVQSEIERIFELART Q9MZL5 298 18 -
EVQSEIERIFELART Q9QUU7 298 18 -
EVQSEIERIFELART Q9QWL3 299 18 -
EVQSEIERIFELART Q9TS08 123 18 -
EVQSEIERIFELART CCB2_RABIT 325 18 -
EVQSEIERIFEVART Q9Y340 352 18 -
EVQSEIERIFEVART Q9Y341 298 18 -
EVQSEIERIFELART CCBA_HUMAN 301 18 -
EVQSEIERIFELART CCBA_RAT 301 18 -
EVQSEIERIFELART CCBB_HUMAN 301 18 -
EVQSEIERIFELART CCBC_HUMAN 346 18 -
EVQSEIERIFELART O15331 346 18 -
EVQSEIERIFELART Q9C085 301 18 -
EVQSEIERIFELART Q9EPT9 346 18 -
EVQSEIERIFELART Q9MZL6 301 18 -
EVQSEIERIFELART Q9MZL7 301 18 -
EVQSEIERIFELARS CCB4_HUMAN 291 18 -
EVQSEIERIFELART CCBC_RABIT 346 18 -
EVQSEIERIFELAKS CCB3_HUMAN 249 18 -
EVQSEIERIFELAKS CCB3_MOUSE 249 18 -
EVQSEIERIFELAKS CCB3_RABIT 249 18 -
EVQSEIERIFELAKS CCB3_RAT 249 18 -
EVQSEIERIFELAKS Q9MZL3 249 18 -
EVQSEIERIFELAKS O57653 292 15 -
EVQSEIERIFELSKT Q91629 246 18 -
EVQSEIERIFELAKS Q9QVV3 242 18 -
EVQSEIERIFELAKT Q91630 246 18 -
KVQEEIERIFELARS Q9U0D3 281 19 -
KVQEEIERIFELARS Q9VKI5 385 19 -
EIQTEIERIFELARS O01661 273 20 -
EVNQEIERIFELCRN O44222 299 18 -

Motif 6 width=16
Element Seqn Id St Int Rpt
LQLVVLDADTINHPAQ CCB2_HUMAN 368 0 -
LQLVVLDADTINHPAQ O00304 313 0 -
LQLVVLDADTINHPAQ Q9BWU2 313 0 -
LQLVVLDADTINHPAQ Q9MZL5 313 0 -
LQLVVLDADTINHPAQ Q9QUU7 313 0 -
LQLVVLDADTINHPAQ Q9QWL3 314 0 -
LQLVVLDADTINHPAQ Q9TS08 138 0 -
LQLVVLDADTINHPAQ CCB2_RABIT 340 0 -
LQLVVLDADTINHPAQ Q9Y340 367 0 -
LQLVVLDADTINHPAQ Q9Y341 313 0 -
LQLVALDADTINHPAQ CCBA_HUMAN 316 0 -
LQLVALDADTINHPAQ CCBA_RAT 316 0 -
LQLVALDADTINHPAQ CCBB_HUMAN 316 0 -
LQLVALDADTINHPAQ CCBC_HUMAN 361 0 -
LQLVALDADTINHPAQ O15331 361 0 -
LQLVALDADTINHPAQ Q9C085 316 0 -
LQLVALDADTINHPAQ Q9EPT9 361 0 -
LQLVALDADTINHPAQ Q9MZL6 316 0 -
LQLVALDADTINHPAQ Q9MZL7 316 0 -
LQLVVLDADTINHPAQ CCB4_HUMAN 306 0 -
LQLVALDADTINHPAQ CCBC_RABIT 361 0 -
LQLVVLDADTINHPAQ CCB3_HUMAN 264 0 -
LQLVVLDADTINHPAQ CCB3_MOUSE 264 0 -
LQLVVLDADTINHPAQ CCB3_RABIT 264 0 -
LQLVVLDADTINHPAQ CCB3_RAT 264 0 -
LQLVVLDADTINHPAQ Q9MZL3 264 0 -
LQLVILDADTINHPAQ O57653 307 0 -
LQLVILDADTINHPTQ Q91629 261 0 -
LQLVVLDADTINHPAQ Q9QVV3 257 0 -
LQLVILDADTINHPTQ Q91630 261 0 -
LQLVVLDCDTINHPSQ Q9U0D3 296 0 -
LQLVVLDCDTINHPSQ Q9VKI5 400 0 -
MQLVVLDCDTINHPSQ O01661 288 0 -
LQLVVLDSYTVNYPAQ O44222 314 0 -

Motif 7 width=17
Element Seqn Id St Int Rpt
KTSLAPIIVYVKISSPK CCB2_HUMAN 386 2 -
KTSLAPIIVYVKISSPK O00304 331 2 -
KTSLAPIIVYVKISSPK Q9BWU2 331 2 -
KTSLAPIIVYVKISSPK Q9MZL5 331 2 -
KTSLAPIIVYVKISSPK Q9QUU7 331 2 -
KTSLAPIIVYVKISSPK Q9QWL3 332 2 -
KTSLAPIIVYVKISSPK Q9TS08 156 2 -
KTSLAPIVVYVKISSPK CCB2_RABIT 358 2 -
KTSLAPIIVYVKISSPK Q9Y340 385 2 -
KTSLAPIIVYVKISSPK Q9Y341 331 2 -
KTSLAPIIVYIKITSPK CCBA_HUMAN 334 2 -
KTSLAPIIVYIKITSPK CCBA_RAT 334 2 -
KTSLAPIIVYIKITSPK CCBB_HUMAN 334 2 -
KTSLAPIIVYIKITSPK CCBC_HUMAN 379 2 -
KTSLAPIIVYIKITSPK O15331 379 2 -
KTSLAPIIVYIKITSPK Q9C085 334 2 -
KTSLAPIIVYIKITSPK Q9EPT9 379 2 -
KTSLAPIIVYIKITSPK Q9MZL6 334 2 -
KTSLAPIIVYIKITSPK Q9MZL7 334 2 -
KTSLAPIIVHVKVSSPK CCB4_HUMAN 324 2 -
KTSLAPIIVYIKITSPK CCBC_RABIT 379 2 -
KTSLAPIIVFVKVSSPK CCB3_HUMAN 282 2 -
KTSLAPIIVFVKVSSPK CCB3_MOUSE 282 2 -
KTSLAPIIVFVKVSSPK CCB3_RABIT 282 2 -
KTSLAPIIVFVKVSSPK CCB3_RAT 282 2 -
KTSLAPIIVFVKVSSPK Q9MZL3 282 2 -
KTSLAPIVVYVKVSSPK O57653 325 2 -
KTSLAPIIVFVKVSSPK Q91629 279 2 -
KTSLAPIIVFVKVSSPK Q9QVV3 275 2 -
KSSLAPIIVFVKVSSPK Q91630 279 2 -
KTSLAPTIVYLKISSSK Q9U0D3 314 2 -
KTSLAPTIVYLKISSSK Q9VKI5 418 2 -
KTSLAPIHVYIKISSPK O01661 306 2 -
KTSLAPIIVYIKISSPK O44222 332 2 -

Motif 8 width=16
Element Seqn Id St Int Rpt
LIKSRGKSQAKHLNVQ CCB2_HUMAN 407 4 -
LIKSRGKSQAKHLNVQ O00304 352 4 -
LIKSRGKSQAKHLNVQ Q9BWU2 352 4 -
LIKSRGKSQAKHLNVQ Q9MZL5 352 4 -
LIKSRGKSQAKHLNVQ Q9QUU7 352 4 -
LIKSRGKSQAKHLNVQ Q9QWL3 353 4 -
LIKSRGKSQAKHLNVQ Q9TS08 177 4 -
LIKSRGKSQAKHLNVQ CCB2_RABIT 379 4 -
LIKSRGKSQAKHLNVQ Q9Y340 406 4 -
LIKSRGKSQAKHLNVQ Q9Y341 352 4 -
LIKSRGKSQSKHLNVQ CCBA_HUMAN 355 4 -
LIKSRGKSQSKHLNVQ CCBA_RAT 355 4 -
LIKSRGKSQSKHLNVQ CCBB_HUMAN 355 4 -
LIKSRGKSQSKHLNVQ CCBC_HUMAN 400 4 -
LIKSRGKSQSKHLNVQ O15331 400 4 -
LIKSRGKSQSKHLNVQ Q9C085 355 4 -
LIKSRGKSQSKHLNVQ Q9EPT9 400 4 -
LIKSRGKSQSKHLNVQ Q9MZL6 355 4 -
LIKSRGKSQSKHLNVQ Q9MZL7 355 4 -
LIKSRGKSQSKHLNVQ CCB4_HUMAN 345 4 -
LIKSRGKSQSKHLNVQ CCBC_RABIT 400 4 -
LIRSRGKSQMKHLTVQ CCB3_HUMAN 303 4 -
LIRSRGKSQMKHLTVQ CCB3_MOUSE 303 4 -
LIRSRGKSQMKHLTVQ CCB3_RABIT 303 4 -
LIRSRGKSQMKHLTVQ CCB3_RAT 303 4 -
LIRSRGKSQMKHLTVQ Q9MZL3 303 4 -
LVKSRGKSQSKHLNVQ O57653 346 4 -
LIKSRGKSQVKHLNVQ Q91629 300 4 -
LIRSRGKSQMKHLTVQ Q9QVV3 296 4 -
LIKSRGKSQVKHLNVQ Q91630 300 4 -
LIKSRGKSQAKNLSVQ Q9U0D3 335 4 -
LIKSRGKSQAKNLSVQ Q9VKI5 439 4 -
LIKSRGKSQSRNMNVQ O01661 327 4 -
LVKSRGKSQSKNLNVQ O44222 353 4 -

Motif 9 width=12
Element Seqn Id St Int Rpt
MVAADKLAQCPP CCB2_HUMAN 423 0 -
MVAADKLAQCPP O00304 368 0 -
MVAADKLAQCPP Q9BWU2 368 0 -
MVAADKLAQCPP Q9MZL5 368 0 -
MVAADKLAQCPP Q9QUU7 368 0 -
MVAADKLAQCPP Q9QWL3 369 0 -
MVAADKLAQCPP Q9TS08 193 0 -
MVAADKLAQCPP CCB2_RABIT 395 0 -
MVAADKLAQCPP Q9Y340 422 0 -
MVAADKLAQCPP Q9Y341 368 0 -
IAASEKLAQCPP CCBA_HUMAN 371 0 -
IAASEKLAQCPP CCBA_RAT 371 0 -
IAASEKLAQCPP CCBB_HUMAN 371 0 -
IAASEKLAQCPP CCBC_HUMAN 416 0 -
IAASEKLAQCPP O15331 416 0 -
IAASEKLAQCPP Q9C085 371 0 -
IAASEKLAQCPP Q9EPT9 416 0 -
IAASEKLAQCPP Q9MZL6 371 0 -
IAASEKLAQCPP Q9MZL7 371 0 -
LVAADKLAQCPP CCB4_HUMAN 361 0 -
IAASEKLAQCPP CCBC_RABIT 416 0 -
MMAYDKLVQCPP CCB3_HUMAN 319 0 -
MMAYDKLVQCPP CCB3_MOUSE 319 0 -
MMAYDKLVQCPP CCB3_RABIT 319 0 -
MMAYDKLVQCPP CCB3_RAT 319 0 -
MMAYDKLVQCPP Q9MZL3 319 0 -
MMAADKLSQCPP O57653 362 0 -
MLAADKLIQCPP Q91629 316 0 -
MMAYDKLVQCPP Q9QVV3 312 0 -
MLAADKLIQCPP Q91630 316 0 -
MVAAEKLAQCPP Q9U0D3 351 0 -
MVAAEKLAQCPP Q9VKI5 455 0 -
MVAAEKLAQCQA O01661 343 0 -
LVAAVKLGQCSE O44222 369 0 -