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PR01164

Identifier
GAMMATUBULIN  [View Relations]  [View Alignment]  
Accession
PR01164
No. of Motifs
8
Creation Date
31-JUL-1999
Title
Gamma-tubulin signature
Database References
PRINTS; PR01161 TUBULIN
INTERPRO; IPR002454
Literature References
1. CLEVELAND, D.W. AND SULLIVAN, K.F.
Molecular biology and genetics of tubulin.
ANNU.REV.BIOCHEMISTRY 54 331-365 (1985).
 
2. JOSHI, H.C. AND CLEVELAND, D.W.
Diversity among tubulin subunits: toward what functional end?
CELL MOTIL.CYTOSKELETON 16 159-163 (1990).
 
3. MITCHISON, T.J.
Localization of an exchangeable GTP binding site at the plus end of 
microtubules.
SCIENCE 261 1044-1047 (1993).
 
4. HESSE, J., THIERAUF, M. AND PONSTINGL, H.
Tubulin sequence region beta 155-174 is involved in binding exchangeable 
guanosine triphosphate.
J.BIOL.CHEM. 262 15472-15475 (1987).
 
5. JOSHI, H.C.
Gamma-tubulin: the hub of cellular microtubule assemblies.
BIOESSAYS 15 637-643 (1993).
 
6. ZHENG, Y., JUNG, M.K. AND OAKLEY, B.R.
Gamma-tubulin is present in Drosophila melanogaster and Homo sapiens and is
associated with the centrosome.
CELL 65 817-823 (1991). 

Documentation
Microtubules are polymers of tubulin, a dimer of two 55kDa subunits, 
designated alpha and beta [1,2]. Within the microtubule lattice, alpha-beta
heterodimers associate in a head-to-tail fashion, giving rise to microtubule 
polarity. Fluorescent labelling studies have suggested that tubulin is
oriented in microtubules with beta-tubulin toward the plus end [3]. 
 
For maximal rate and extent of polymerisation into microtubules, tubulin 
requires GTP. Two molecules of GTP are bound at different sites, termed N 
and E. At the E (Exchangeable) site, GTP is hydrolysed during incorporation
into the microtubule. Close to the E site is an invariant region rich in 
glycine residues, which is found in both chains and is thought to control
access of the nucleotide to its binding site [4]. 
 
Most species, excepting simple eukaryotes, express a variety of closely-
related alpha- and beta-isotypes. A third family member, gamma-tubulin, has
also been identified in a number of species [5,6]. 
 
Gamma-tubulins constitute a ubiquitous and highly-conserved subfamily of 
the tubulin family. The protein is found at microtubule-organising centres, 
such as the spindle poles or the centrosome. It remains associated with the 
centrosome when microtubules are depolymerised, suggesting that it is 
an integral component that might play a role in minus-end nucleation of 
microtubule assembly [5,6]. 
 
GAMMATUBULIN is an 8-element fingerprint that provides a signature for gamma-
tubulins. The fingerprint was derived from an initial alignment of 15
sequences. The motifs were drawn from conserved regions spanning virtually
the full alignment length, focusing on those sections that characterise the 
gamma-tubulins but distinguish them from the rest of the tubulin family.
Two iterations on SPTR37_10f were required to reach convergence, at which 
point a true set comprising 32 sequences was identified. Several partial 
matches were also found, most of which are gamma-tubulins that fail to make
significant matches with one or more motifs, and two are beta-tubulins that
match two motifs.
Summary Information
  32 codes involving  8 elements
0 codes involving 7 elements
0 codes involving 6 elements
1 codes involving 5 elements
0 codes involving 4 elements
1 codes involving 3 elements
3 codes involving 2 elements
Composite Feature Index
83232323232323232
700000000
600000000
501101011
400000000
300100011
203100101
12345678
True Positives
O00849        O00896        O15812        O22417        
O49068 O77160 O96769 P90548
Q39582 Q41807 Q41873 Q94771
Q9Z310 TBG1_ARATH TBG1_DROME TBG1_EUPCR
TBG2_ARATH TBG2_DROME TBG2_EUPCR TBG_ANEPH
TBG_EMENI TBG_ENTHI TBG_EUPAE TBG_EUPOC
TBG_HUMAN TBG_MAIZE TBG_NEUCR TBG_PLAFO
TBG_RETFI TBG_SCHPO TBG_USTVI TBG_XENLA
True Positive Partials
Codes involving 5 elements
TBG_CAEEL
Codes involving 3 elements
TBG_YEAST
Codes involving 2 elements
O93807 Q42480 TBB1_COLGR
Sequence Titles
O00849      GAMMA-TUBULIN - TETRAHYMENA THERMOPHILA.      
O00896 GAMMA-TUBULIN - PHYSARUM POLYCEPHALUM (SLIME MOLD).
O15812 GAMMA TUBULIN - DICTYOSTELIUM DISCOIDEUM (SLIME MOLD).
O22417 GAMMA TUBULIN - CHLAMYDOMONAS REINHARDTII.
O49068 GAMMA-TUBULIN - ORYZA SATIVA (RICE).
O77160 GAMMA-TUBULIN - DROSOPHILA MELANOGASTER (FRUIT FLY).
O96769 GAMMA-TUBULIN - PARAMECIUM TETRAURELIA.
P90548 GAMMA-TUBULIN 2 - EUPLOTES OCTOCARINATUS.
Q39582 GAMMA-TUBULIN - CHLAMYDOMONAS REINHARDTII.
Q41807 MAIZE GAMMA1 TUBULIN - ZEA MAYS (MAIZE).
Q41873 GAMMA-TUBULIN 1 - ZEA MAYS (MAIZE).
Q94771 GAMMA-TUBULIN - Trypanosoma brucei brucei.
Q9Z310 TUBULIN - RATTUS NORVEGICUS (RAT).
TBG1_ARATH TUBULIN GAMMA-1 CHAIN - ARABIDOPSIS THALIANA (MOUSE-EAR CRESS).
TBG1_DROME TUBULIN GAMMA-1 CHAIN - DROSOPHILA MELANOGASTER (FRUIT FLY).
TBG1_EUPCR TUBULIN GAMMA-1 CHAIN - EUPLOTES CRASSUS.
TBG2_ARATH TUBULIN GAMMA-2 CHAIN - ARABIDOPSIS THALIANA (MOUSE-EAR CRESS).
TBG2_DROME TUBULIN GAMMA-2 CHAIN - DROSOPHILA MELANOGASTER (FRUIT FLY).
TBG2_EUPCR TUBULIN GAMMA-2 CHAIN - EUPLOTES CRASSUS.
TBG_ANEPH TUBULIN GAMMA CHAIN - ANEMIA PHYLLITIDIS (FERN).
TBG_EMENI TUBULIN GAMMA CHAIN - EMERICELLA NIDULANS (ASPERGILLUS NIDULANS).
TBG_ENTHI TUBULIN GAMMA CHAIN - ENTAMOEBA HISTOLYTICA.
TBG_EUPAE TUBULIN GAMMA CHAIN - EUPLOTES AEDICULATUS.
TBG_EUPOC TUBULIN GAMMA CHAIN - EUPLOTES OCTOCARINATUS.
TBG_HUMAN TUBULIN GAMMA CHAIN - HOMO SAPIENS (HUMAN).
TBG_MAIZE TUBULIN GAMMA CHAIN - ZEA MAYS (MAIZE).
TBG_NEUCR TUBULIN GAMMA CHAIN - NEUROSPORA CRASSA.
TBG_PLAFO TUBULIN GAMMA CHAIN - PLASMODIUM FALCIPARUM (ISOLATE NF54).
TBG_RETFI TUBULIN GAMMA CHAIN - RETICULOMYXA FILOSA.
TBG_SCHPO TUBULIN GAMMA CHAIN - SCHIZOSACCHAROMYCES POMBE (FISSION YEAST).
TBG_USTVI TUBULIN GAMMA CHAIN - USTILAGO VIOLACEA (SMUT FUNGUS).
TBG_XENLA TUBULIN GAMMA CHAIN - XENOPUS LAEVIS (AFRICAN CLAWED FROG).

TBG_CAEEL TUBULIN GAMMA CHAIN - CAENORHABDITIS ELEGANS.

TBG_YEAST TUBULIN GAMMA CHAIN - SACCHAROMYCES CEREVISIAE (BAKER'S YEAST).

O93807 GAMMA-TUBULIN - CANDIDA ALBICANS (YEAST).
Q42480 BETA-TUBULIN 1 - CHONDRUS CRISPUS (CARRAGHEEN).
TBB1_COLGR TUBULIN BETA-1 CHAIN - COLLETOTRICHUM GRAMINICOLA (ANTHRACNOSE FUNGUS) (GLOMEREL
Scan History
SPTR37_10f 2  100  NSINGLE    
Initial Motifs
Motif 1  width=21
Element Seqn Id St Int Rpt
ISKDGILEDFATQGGDRKDVF TBG1_ARATH 31 31 -
ISKDGILEDFATQGGDRKDVF TBG2_ARATH 31 31 -
ISKEGMLEDFATQGGDRKDVF TBG_ANEPH 31 31 -
IGKDGLLEDFATQGGDRKDVF TBG_MAIZE 31 31 -
INPEGILEDFAVNGEDRKDVF TBG_EUPOC 31 31 -
ISPEGIVEEFATEGTDRKDVF TBG_XENLA 31 31 -
ISPEAIVEEFATEGTDRKDVF TBG_HUMAN 31 31 -
INPEGILEEYAQNGEDRKDVF TBG1_EUPCR 31 31 -
IGPDGTLESFATEGVDRKDVF TBG_SCHPO 31 31 -
ISPEGILEEYALDGEDRKDVF TBG2_EUPCR 31 31 -
ISQDGNLEEFATEGGDRKDVF TBG_EMENI 31 31 -
ISQDGTIEDFATEGGDRKDVF TBG_NEUCR 31 31 -
ISPDGVLEDFATDGQDRKDVF TBG2_DROME 31 31 -
ISPSGVLEDFANDGLDRKDVF TBG1_DROME 31 31 -
ISKEGVLEDWATDMTDRKDVF TBG_USTVI 31 31 -
GILPDGSLSTNEFIDDRKDVF TBG_ENTHI 30 30 -

Motif 2 width=16
Element Seqn Id St Int Rpt
EEIMDMIDREADGSDS TBG1_ARATH 116 64 -
EEIMDMIDREADGSDS TBG2_ARATH 116 64 -
EDIMDMIDREADGSDS TBG_ANEPH 116 64 -
DDIMDMVDREADGSDS TBG_MAIZE 116 64 -
DEILEMIDREADGSDS TBG_EUPOC 116 64 -
EDIFDIIDREADGSDS TBG_XENLA 116 64 -
EDIFDIIDREADGSDS TBG_HUMAN 116 64 -
EEIIEMIDREADGSDS TBG1_EUPCR 116 64 -
EDIMDMIDREADGSDS TBG_SCHPO 116 64 -
EEIIEMIDREADGSDS TBG2_EUPCR 116 64 -
EEVFDMIDREADGSDS TBG_EMENI 116 64 -
EEIMEMIEREADGSDS TBG_NEUCR 116 64 -
EEVFDILDREADGSDS TBG2_DROME 116 64 -
EEVFDIIDREADGSDS TBG1_DROME 116 64 -
EEVMEMIDREAEGSDS TBG_USTVI 116 64 -
SEIEEIIDREVEHCDS TBG_ENTHI 113 62 -

Motif 3 width=14
Element Seqn Id St Int Rpt
KRLTLNADCVVVLD TBG1_ARATH 193 61 -
KRLTLNADCVVVLD TBG2_ARATH 193 61 -
KRLTINADCVVVLD TBG_ANEPH 194 62 -
KRLTLNADCVVVLD TBG_MAIZE 193 61 -
KRLTLNADCVVVLD TBG_EUPOC 190 58 -
KRLTQNADCVVVLD TBG_XENLA 193 61 -
KRLTQNADCLVVLD TBG_HUMAN 193 61 -
KRLILNADCVVVLD TBG1_EUPCR 190 58 -
KRLTLNADSVVVLD TBG_SCHPO 193 61 -
KRLVLNADCVVVLD TBG2_EUPCR 190 58 -
RRLTQNADSVVVLD TBG_EMENI 192 60 -
RRLTQNADSVVVLD TBG_NEUCR 193 61 -
KRLTKCADSVVVLD TBG2_DROME 193 61 -
KRLTTAADSVVVLD TBG1_DROME 193 61 -
KRLTNHADSVIVLD TBG_USTVI 192 60 -
RRLITECQSVVVFD TBG_ENTHI 188 59 -

Motif 4 width=12
Element Seqn Id St Int Rpt
NDLVGLLASLIP TBG1_ARATH 251 44 -
NDLVGLLASLIP TBG2_ARATH 251 44 -
NDLVGLVASLIP TBG_ANEPH 252 44 -
NDLVGLLASLIP TBG_MAIZE 251 44 -
NDMVGLIASLVP TBG_EUPOC 248 44 -
NDLIGLIASLIP TBG_XENLA 251 44 -
NDLIGLIASLIP TBG_HUMAN 251 44 -
NDLVGLIASLVP TBG1_EUPCR 248 44 -
NDLVSIIASLIP TBG_SCHPO 251 44 -
NDLVGLIASLVP TBG2_EUPCR 248 44 -
NDLVGIIASLIP TBG_EMENI 250 44 -
NDLVSILASLIP TBG_NEUCR 251 44 -
NNLIGLTASLIP TBG2_DROME 251 44 -
NNLIGLTAPLIP TBG1_DROME 251 44 -
NDLVGMIASLIP TBG_USTVI 250 44 -
NSLNSLMIHLCP TBG_ENTHI 246 44 -

Motif 5 width=16
Element Seqn Id St Int Rpt
RKTTVLDVMRRLLQTK TBG1_ARATH 286 23 -
RKTTVLDVMRRLLQTK TBG2_ARATH 286 23 -
RKTTVLDVMRRLLQAK TBG_ANEPH 287 23 -
RKTTVLDVMRRLLQTK TBG_MAIZE 286 23 -
RKTTVLDVMRRLLQTK TBG_EUPOC 283 23 -
RKTTVLDVMRRLLQPK TBG_XENLA 286 23 -
RKTTVLDVMRRLLQPK TBG_HUMAN 286 23 -
RKTTVLDVMRRLLQTK TBG1_EUPCR 284 24 -
RKTTVLDVMRRLLLPK TBG_SCHPO 288 25 -
RKTTVLDVMRRLLQTR TBG2_EUPCR 284 24 -
RKTTVLDVMRRLLQPK TBG_EMENI 287 25 -
RKTTVLDVMRRLLQPK TBG_NEUCR 288 25 -
RKTTVLDVMRRLLQPK TBG2_DROME 287 24 -
RKTTVLDVMRRLLQPK TBG1_DROME 291 28 -
RKTTVLDVMRRLLQPK TBG_USTVI 287 25 -
SRTSAIDVMKRLIQPQ TBG_ENTHI 279 21 -

Motif 6 width=24
Element Seqn Id St Int Rpt
RIRERKLVNFIEWGPASIQVALSK TBG1_ARATH 341 39 -
RIRERKLVNFIDWGPASIQVALSK TBG2_ARATH 341 39 -
RIRERKLANFIEWGPASIQVALSR TBG_ANEPH 342 39 -
RIRERKLVNFIDWAPASIQVALSR TBG_MAIZE 341 39 -
RIRERKLANFIPWGPASIQVALSK TBG_EUPOC 333 34 -
RIRERKLANFIPWGPASIQVALSR TBG_XENLA 339 37 -
RIRERKLANFIPWGPASIQVALSR TBG_HUMAN 339 37 -
RIRERKLANFIPWGPASIQVALSK TBG1_EUPCR 334 34 -
RIRERRYASFIPWGPASIQVALSK TBG_SCHPO 339 35 -
RIRERNVANFIPWGPASIQVALSK TBG2_EUPCR 334 34 -
RIRERRLASFIPWGPASIQVALTK TBG_EMENI 338 35 -
RIRERRLATFIPWGPASIQVALTK TBG_NEUCR 339 35 -
RIRERKLANFIPWGPASIQVALPR TBG2_DROME 340 37 -
RIRDRKMAQFIPWGPTSIQVALSR TBG1_DROME 344 37 -
RIRERNSATFIPWGPASIQVALTK TBG_USTVI 340 37 -
RFTDRRLAEFVPWNKEAIKVVHTR TBG_ENTHI 329 34 -

Motif 7 width=21
Element Seqn Id St Int Rpt
SPYVQTAHRVSGLMLASHTSI TBG1_ARATH 366 1 -
SPYVQTSHRVSGLMLASHTSI TBG2_ARATH 366 1 -
SPYVQTAHRVSGLMLASHTSI TBG_ANEPH 367 1 -
SPYVQTTHRVSGLMLANHTSI TBG_MAIZE 366 1 -
SPYIDSGHKVSGLMLANHTGI TBG_EUPOC 358 1 -
SPYLPSAHRVSGLMMANHTNI TBG_XENLA 364 1 -
SPYLPSAHRVSGLMMANHTSI TBG_HUMAN 364 1 -
SPYMESGHKVSGLMLANHTGI TBG1_EUPCR 359 1 -
SPYIKTNHRVSGLMLANHTSI TBG_SCHPO 364 1 -
SPYIESDNKVSGLMLANHTGI TBG2_EUPCR 359 1 -
SPYIQNTHRVSGLMLANHTSV TBG_EMENI 363 1 -
SPYVTMAHRVSGLMLANHTSI TBG_NEUCR 364 1 -
SPYVQSAHKVSGLMMANHTGI TBG2_DROME 365 1 -
SPYVQSNHRVSGLMLANHTSI TBG1_DROME 369 1 -
SPYVQTTHKVSGLMLANHTNI TBG_USTVI 365 1 -
SPLVKRGNRMSGMLLANNTSI TBG_ENTHI 354 1 -

Motif 8 width=24
Element Seqn Id St Int Rpt
EFDESRDIIESLVDEYKACESPDY TBG1_ARATH 423 36 -
EFDESRDIIESLVDEYKACESPDY TBG2_ARATH 423 36 -
EFDESREIVQSLVDEYKACESADY TBG_ANEPH 424 36 -
EFDESREIIESLVDEYKACESPDY TBG_MAIZE 423 36 -
EFDSSDEVVKSLIDEYAAAEKMDY TBG_EUPOC 414 35 -
ELDNSREIVQQLIDEYHAATRPDY TBG_XENLA 420 35 -
EMDTSREIVQQLIDEYHAATRPDY TBG_HUMAN 420 35 -
EFDSSDEVVKSLIEDSAAAEKMDY TBG1_EUPCR 415 35 -
EFDSSRDVVADLINEYEACEDPNY TBG_SCHPO 420 35 -
EFDSSEEVVKDLIDEYAAAEKMDY TBG2_EUPCR 415 35 -
EFDEARAVVMDLVGEYEAAERENY TBG_EMENI 419 35 -
EFDEAREVVMDLIADYEAAEDANY TBG_NEUCR 420 35 -
ELDIARDTVDCLVQEYEAATQIDY TBG2_DROME 421 35 -
ELDESRETVDCLVQEYEAATREDY TBG1_DROME 425 35 -
EFDEARATVQDLIEEYQACEKADY TBG_USTVI 421 35 -
EFEESKEIVKCVIEEYAKAESIEY TBG_ENTHI 407 32 -
Final Motifs
Motif 1  width=21
Element Seqn Id St Int Rpt
ISKDGILEDFATQGGDRKDVF TBG1_ARATH 31 31 -
ISKDGILEDFATQGGDRKDVF TBG2_ARATH 31 31 -
IGKDGLLEDFATQGGDRKDVF O49068 31 31 -
ISKEGMLEDFATQGGDRKDVF TBG_ANEPH 31 31 -
IGKDGLLEDFATQGGDRKDVF TBG_MAIZE 31 31 -
IGKDGLLEDFATQGGDRKDVF Q41873 31 31 -
IGKDGLLEDFATQGGDRKDVF Q41807 31 31 -
ISPEGIVEEFATEGTDRKDVF Q9Z310 31 31 -
INPEGILEDFAVNGEDRKDVF TBG_EUPOC 31 31 -
INPEGILEDFAVNGEDRKDVF P90548 31 31 -
ISPEGIVEEFATEGTDRKDVF TBG_XENLA 31 31 -
ISPEAIVEEFATEGTDRKDVF TBG_HUMAN 31 31 -
INPEGILEDFAVNGEDRKDVF TBG_EUPAE 31 31 -
INPEGILEEYAQNGEDRKDVF TBG1_EUPCR 31 31 -
IGPDGTLESFATEGVDRKDVF TBG_SCHPO 31 31 -
ISPEGILEEYALDGEDRKDVF TBG2_EUPCR 31 31 -
INREGFLEEFATQGGDRKDVF O00896 31 31 -
ISQDGNLEEFATEGGDRKDVF TBG_EMENI 31 31 -
ISQDGTIEDFATEGGDRKDVF TBG_NEUCR 31 31 -
ISPDGVLEDFATDGQDRKDVF TBG2_DROME 31 31 -
ISPDGVLEDFATDGQDRKDVF O77160 31 31 -
ISPSGVLEDFANDGLDRKDVF TBG1_DROME 31 31 -
ISKEGVLEDWATDMTDRKDVF TBG_USTVI 31 31 -
INNEGILEEFALQGDDRKDVF O96769 31 31 -
IAKDGRLEDFATLGGDRKDVF O22417 31 31 -
IAKDGRLEDFATLGGDRKDVF Q39582 31 31 -
INAAGYLEEFAKPGIDRKDVF O15812 31 31 -
INQEGILQEYATNTDDRKEVF O00849 31 31 -
IRHDGVVESFASGGDDRKDVF Q94771 31 31 -
IGPDGIVKEFATEGTDRKDVF TBG_RETFI 31 31 -
IDQEGILKNNNFLNEDRKDIF TBG_PLAFO 31 31 -
GILPDGSLSTNEFIDDRKDVF TBG_ENTHI 30 30 -

Motif 2 width=16
Element Seqn Id St Int Rpt
EEIMDMIDREADGSDS TBG1_ARATH 116 64 -
EEIMDMIDREADGSDS TBG2_ARATH 116 64 -
DDIMDMIDREADGSDS O49068 116 64 -
EDIMDMIDREADGSDS TBG_ANEPH 116 64 -
DDIMDMVDREADGSDS TBG_MAIZE 116 64 -
DDIMDMVDREADGSDS Q41873 116 64 -
DDIMDMVDREADGSDS Q41807 116 64 -
EDIFDIIDREADGSDS Q9Z310 116 64 -
DEILEMIDREADGSDS TBG_EUPOC 116 64 -
DEILEMIDREADGSDS P90548 116 64 -
EDIFDIIDREADGSDS TBG_XENLA 116 64 -
EDIFDIIDREADGSDS TBG_HUMAN 116 64 -
DEILEMIDREADGSDS TBG_EUPAE 116 64 -
EEIIEMIDREADGSDS TBG1_EUPCR 116 64 -
EDIMDMIDREADGSDS TBG_SCHPO 116 64 -
EEIIEMIDREADGSDS TBG2_EUPCR 116 64 -
EATLEMIDREADGSDS O00896 116 64 -
EEVFDMIDREADGSDS TBG_EMENI 116 64 -
EEIMEMIEREADGSDS TBG_NEUCR 116 64 -
EEVFDILDREADGSDS TBG2_DROME 116 64 -
EEVFDILDREADGSDS O77160 116 64 -
EEVFDIIDREADGSDS TBG1_DROME 116 64 -
EEVMEMIDREAEGSDS TBG_USTVI 116 64 -
EELMEMIDREADGSDS O96769 116 64 -
ETLLDMIDREAEYCDS O22417 116 64 -
ETLLDMIDREAEYCDS Q39582 116 64 -
DDIFDMIDREADGSES O15812 116 64 -
DDLLDMIDREADTSDS O00849 117 65 -
ETLFDMIEREAENSDS Q94771 116 64 -
EHIMDMIDREDNSDSL TBG_RETFI 116 64 -
EEIIDMIDREVDNSDN TBG_PLAFO 116 64 -
SEIEEIIDREVEHCDS TBG_ENTHI 113 62 -

Motif 3 width=14
Element Seqn Id St Int Rpt
KRLTLNADCVVVLD TBG1_ARATH 193 61 -
KRLTLNADCVVVLD TBG2_ARATH 193 61 -
KRLTLNADCVVVLD O49068 193 61 -
KRLTINADCVVVLD TBG_ANEPH 194 62 -
KRLTLNADCVVVLD TBG_MAIZE 193 61 -
KRLTLNADCVVVLD Q41873 193 61 -
KRLTLNADCVVVLD Q41807 193 61 -
KRLTQNADCVVVLD Q9Z310 193 61 -
KRLTLNADCVVVLD TBG_EUPOC 190 58 -
KRLTLNADCVVVLD P90548 190 58 -
KRLTQNADCVVVLD TBG_XENLA 193 61 -
KRLTQNADCLVVLD TBG_HUMAN 193 61 -
KRLTLNADCVVVLD TBG_EUPAE 190 58 -
KRLILNADCVVVLD TBG1_EUPCR 190 58 -
KRLTLNADSVVVLD TBG_SCHPO 193 61 -
KRLVLNADCVVVLD TBG2_EUPCR 190 58 -
KRLTLNADAVVVLD O00896 190 58 -
RRLTQNADSVVVLD TBG_EMENI 192 60 -
RRLTQNADSVVVLD TBG_NEUCR 193 61 -
KRLTKCADSVVVLD TBG2_DROME 193 61 -
KRLTKCADSVVVLD O77160 193 61 -
KRLTTAADSVVVLD TBG1_DROME 193 61 -
KRLTNHADSVIVLD TBG_USTVI 192 60 -
RRLAQNADAVVVLD O96769 193 61 -
KRLTLHADAVVVLD O22417 193 61 -
KRLTLHADAVVVLD Q39582 193 61 -
KRLIENADSTVVLD O15812 190 58 -
KRLALNADATTVLD O00849 192 59 -
KRLTLHADCVVVLD Q94771 195 63 -
KRLILNADAVVVID TBG_RETFI 192 60 -
KRLILSTDSVVVID TBG_PLAFO 194 62 -
RRLITECQSVVVFD TBG_ENTHI 188 59 -

Motif 4 width=12
Element Seqn Id St Int Rpt
NDLVGLLASLIP TBG1_ARATH 251 44 -
NDLVGLLASLIP TBG2_ARATH 251 44 -
NDLVGLLASLIP O49068 251 44 -
NDLVGLVASLIP TBG_ANEPH 252 44 -
NDLVGLLASLIP TBG_MAIZE 251 44 -
NDLVGLLASLIP Q41873 251 44 -
NDLVGLLASLIP Q41807 251 44 -
NDLIGLIASLIP Q9Z310 251 44 -
NDMVGLIASLVP TBG_EUPOC 248 44 -
NDMVGLIASLVP P90548 248 44 -
NDLIGLIASLIP TBG_XENLA 251 44 -
NDLIGLIASLIP TBG_HUMAN 251 44 -
NDMVGLIASLVP TBG_EUPAE 248 44 -
NDLVGLIASLVP TBG1_EUPCR 248 44 -
NDLVSIIASLIP TBG_SCHPO 251 44 -
NDLVGLIASLVP TBG2_EUPCR 248 44 -
NDLIGLLASLIP O00896 248 44 -
NDLVGIIASLIP TBG_EMENI 250 44 -
NDLVSILASLIP TBG_NEUCR 251 44 -
NNLIGLTASLIP TBG2_DROME 251 44 -
NNLIGLTASLIP O77160 251 44 -
NNLIGLTAPLIP TBG1_DROME 251 44 -
NDLVGMIASLIP TBG_USTVI 250 44 -
NDLVSILAGLVP O96769 251 44 -
NDLVGLVASLIP O22417 251 44 -
NDLVGLVASLIP Q39582 251 44 -
NDLVGMLASLIP O15812 248 44 -
NDLVGLLASLVP O00849 250 44 -
NDLMSMLASLIP Q94771 253 44 -
NDLVGLIASLVP TBG_RETFI 250 44 -
NDMISLISSLII TBG_PLAFO 252 44 -
NSLNSLMIHLCP TBG_ENTHI 246 44 -

Motif 5 width=16
Element Seqn Id St Int Rpt
RKTTVLDVMRRLLQTK TBG1_ARATH 286 23 -
RKTTVLDVMRRLLQTK TBG2_ARATH 286 23 -
RKTTVLDVMRRLLQTK O49068 286 23 -
RKTTVLDVMRRLLQAK TBG_ANEPH 287 23 -
RKTTVLDVMRRLLQTK TBG_MAIZE 286 23 -
RKTTVLDVMRRLLQTK Q41873 286 23 -
RKTTVLDVMRRLLQTK Q41807 286 23 -
RKTTVLDVMRRLLQPK Q9Z310 286 23 -
RKTTVLDVMRRLLQTK TBG_EUPOC 283 23 -
RKTTVLDVMRRLLQTK P90548 283 23 -
RKTTVLDVMRRLLQPK TBG_XENLA 286 23 -
RKTTVLDVMRRLLQPK TBG_HUMAN 286 23 -
RKTTFLDVMRRLLQTK TBG_EUPAE 283 23 -
RKTTVLDVMRRLLQTK TBG1_EUPCR 284 24 -
RKTTVLDVMRRLLLPK TBG_SCHPO 288 25 -
RKTTVLDVMRRLLQTR TBG2_EUPCR 284 24 -
HKTTVLDVMRRLLQPQ O00896 283 23 -
RKTTVLDVMRRLLQPK TBG_EMENI 287 25 -
RKTTVLDVMRRLLQPK TBG_NEUCR 288 25 -
RKTTVLDVMRRLLQPK TBG2_DROME 287 24 -
RKTTVLDVMRRLLQPK O77160 287 24 -
RKTTVLDVMRRLLQPK TBG1_DROME 291 28 -
RKTTVLDVMRRLLQPK TBG_USTVI 287 25 -
RKTTVLDVMRRLLQTK O96769 286 23 -
RKTTVLDVMRRLLQPK O22417 290 27 -
RKTTVLDVMRRLLQPK Q39582 290 27 -
RKTSVLDVMRRLLQPQ O15812 283 23 -
RKTTVLDVMRRLLQTK O00849 285 23 -
QKTSVHDVMRRLLMPK Q94771 290 25 -
QKTSVLDVMRRLLQPK TBG_RETFI 285 23 -
QKTTVLDVMKRLLHTK TBG_PLAFO 287 23 -
SRTSAIDVMKRLIQPQ TBG_ENTHI 279 21 -

Motif 6 width=24
Element Seqn Id St Int Rpt
RIRERKLVNFIEWGPASIQVALSK TBG1_ARATH 341 39 -
RIRERKLVNFIDWGPASIQVALSK TBG2_ARATH 341 39 -
RIRERKLVNFIEWGPASIQVALSR O49068 341 39 -
RIRERKLANFIEWGPASIQVALSR TBG_ANEPH 342 39 -
RIRERKLVNFIDWAPASIQVALSR TBG_MAIZE 341 39 -
RIRERKLVNFIDWAPASIQVALSR Q41873 341 39 -
RIRERKLVNFIYWAPASIQVALSR Q41807 341 39 -
RIRERKLANFIPWGPASIQVALSR Q9Z310 339 37 -
RIRERKLANFIPWGPASIQVALSK TBG_EUPOC 333 34 -
RIRERKLANFIPWGPASIQVALSK P90548 333 34 -
RIRERKLANFIPWGPASIQVALSR TBG_XENLA 339 37 -
RIRERKLANFIPWGPASIQVALSR TBG_HUMAN 339 37 -
RIKERKLANFIPWGPASIQVALAK TBG_EUPAE 333 34 -
RIRERKLANFIPWGPASIQVALSK TBG1_EUPCR 334 34 -
RIRERRYASFIPWGPASIQVALSK TBG_SCHPO 339 35 -
RIRERNVANFIPWGPASIQVALSK TBG2_EUPCR 334 34 -
GLRERKLASFIDWGPASIQVALSR O00896 333 34 -
RIRERRLASFIPWGPASIQVALTK TBG_EMENI 338 35 -
RIRERRLATFIPWGPASIQVALTK TBG_NEUCR 339 35 -
RIRERKLANFIPWGPASIQVALPR TBG2_DROME 340 37 -
RIRKRKLANFIPWGPASIQVALPR O77160 340 37 -
RIRDRKMAQFIPWGPTSIQVALSR TBG1_DROME 344 37 -
RIRERNSATFIPWGPASIQVALTK TBG_USTVI 340 37 -
RIRERKLASFIEWGPTSIQVALSK O96769 336 34 -
RIRERKQANFIEWGPASIQVALSK O22417 345 39 -
RIRERKQANFIEWGPASIQVALSK Q39582 345 39 -
RIREKRMATFIDWGPASIQIALSK O15812 333 34 -
RIRERKLANFINWGPASIQVALSK O00849 335 34 -
ERIRERSPNFIPWGPASIQVILSK Q94771 339 33 -
RIREKKIVNFIPWGPASIQVALSK TBG_RETFI 335 34 -
RIRDRKLVNFIKWNPASIQVTLAK TBG_PLAFO 337 34 -
RFTDRRLAEFVPWNKEAIKVVHTR TBG_ENTHI 329 34 -

Motif 7 width=21
Element Seqn Id St Int Rpt
SPYVQTAHRVSGLMLASHTSI TBG1_ARATH 366 1 -
SPYVQTSHRVSGLMLASHTSI TBG2_ARATH 366 1 -
SPYVQTTHRVSGLMLANHTSI O49068 366 1 -
SPYVQTAHRVSGLMLASHTSI TBG_ANEPH 367 1 -
SPYVQTTHRVSGLMLANHTSI TBG_MAIZE 366 1 -
SPYVQTTHRVSGLMLANHTSI Q41873 366 1 -
SPYVQTTHRVSGLMLANHTSI Q41807 366 1 -
SPYLPSAHRVSGLMMANHTSI Q9Z310 364 1 -
SPYIDSGHKVSGLMLANHTGI TBG_EUPOC 358 1 -
SPYIDSGHKVSGLMLANHTGI P90548 358 1 -
SPYLPSAHRVSGLMMANHTNI TBG_XENLA 364 1 -
SPYLPSAHRVSGLMMANHTSI TBG_HUMAN 364 1 -
SPYIDSGHKVSGLMLANHTGI TBG_EUPAE 358 1 -
SPYMESGHKVSGLMLANHTGI TBG1_EUPCR 359 1 -
SPYIKTNHRVSGLMLANHTSI TBG_SCHPO 364 1 -
SPYIESDNKVSGLMLANHTGI TBG2_EUPCR 359 1 -
SPYVKTAHRVSGLMLANHTSI O00896 358 1 -
SPYIQNTHRVSGLMLANHTSV TBG_EMENI 363 1 -
SPYVTMAHRVSGLMLANHTSI TBG_NEUCR 364 1 -
SPYVQSAHKVSGLMMANHTGI TBG2_DROME 365 1 -
SPYVQSAHKVSGLMMANHTGI O77160 365 1 -
SPYVQSNHRVSGLMLANHTSI TBG1_DROME 369 1 -
SPYVQTTHKVSGLMLANHTNI TBG_USTVI 365 1 -
SPYIETSHKVSGLMLANHTSI O96769 361 1 -
SPYVQTAHRVSGLMLANHTSV O22417 370 1 -
SPYVQTAHRVSGLMLANHTSV Q39582 370 1 -
SPYIKSSHKVSGLMLANHTSV O15812 358 1 -
SPYIETSHKVSGLMLANHTSI O00849 360 1 -
SPYLDTRHRVSGLVMANHTSI Q94771 364 1 -
SPYANVPYRVSGCMMANHSNL TBG_RETFI 360 1 -
SPHVVSQHKVCGLMMANHTSI TBG_PLAFO 362 1 -
SPLVKRGNRMSGMLLANNTSI TBG_ENTHI 354 1 -

Motif 8 width=24
Element Seqn Id St Int Rpt
EFDESRDIIESLVDEYKACESPDY TBG1_ARATH 423 36 -
EFDESRDIIESLVDEYKACESPDY TBG2_ARATH 423 36 -
EFDESREIIESLVDEYKACESPDY O49068 423 36 -
EFDESREIVQSLVDEYKACESADY TBG_ANEPH 424 36 -
EFDESREIIESLVDEYKACESPDY TBG_MAIZE 423 36 -
EFDESREIIESLVDEYKACESPDY Q41873 423 36 -
EFDESREIIESLVDEYKACESPDY Q41807 423 36 -
EMDTSREIVQQLIDEYHAATRPDY Q9Z310 420 35 -
EFDSSDEVVKSLIDEYAAAEKMDY TBG_EUPOC 414 35 -
EFDSSDEVVKSLIDEYAAAEKMDY P90548 414 35 -
ELDNSREIVQQLIDEYHAATRPDY TBG_XENLA 420 35 -
EMDTSREIVQQLIDEYHAATRPDY TBG_HUMAN 420 35 -
EFDSSDEVVKNLIDEYAAAEKMDY TBG_EUPAE 414 35 -
EFDSSDEVVKSLIEDSAAAEKMDY TBG1_EUPCR 415 35 -
EFDSSRDVVADLINEYEACEDPNY TBG_SCHPO 420 35 -
EFDSSEEVVKDLIDEYAAAEKMDY TBG2_EUPCR 415 35 -
EFDSSREVVASLVDEYIAAEGSDY O00896 414 35 -
EFDEARAVVMDLVGEYEAAERENY TBG_EMENI 419 35 -
EFDEAREVVMDLIADYEAAEDANY TBG_NEUCR 420 35 -
ELDIARDTVDCLVQEYEAATQIDY TBG2_DROME 421 35 -
ELDIARDTVDCLVQEYEAATQIDY O77160 421 35 -
ELDESRETVDCLVQEYEAATREDY TBG1_DROME 425 35 -
EFDEARATVQDLIEEYQACEKADY TBG_USTVI 421 35 -
EFDESRECLEQLISEYKAAESKNY O96769 417 35 -
EFADAKEVVQDLANEYAACESADY O22417 437 46 -
EFADAKEVVQDLANEYAACESADY Q39582 437 46 -
EFDIAREMLDDLVQEYKAAEQSDY O15812 412 33 -
EFDDSKEVVQQLIEEYKAAEEPNY O00849 414 33 -
EFKHSRDVVESLVSEYKACESSDY Q94771 420 35 -
EFEDAKETITNLIEEYKAIQTSDY TBG_RETFI 416 35 -
EMESSKEITQNLIDEYKSAERDDY TBG_PLAFO 423 40 -
EFEESKEIVKCVIEEYAKAESIEY TBG_ENTHI 407 32 -