| Identifier | TCRTETA [View Relations] [View Alignment]
|
| Accession | PR01035 |
| No. of Motifs | 12 |
| Creation Date | 06-DEC-1998 (UPDATE 19-JUN-1999) |
| Title | Tetracycline resistance protein signature |
| Database References |
INTERPRO; IPR001958
|
| Literature References | 1. YAMAGUCHI, A., ONO, N., AKASAKA, T., NOUMI, T. AND SAWAI, T.
Metal-tetracycline/H+ antiporter of Escherichia coli encoded by a
transposon, Tn10. The role of the conserved dipeptide, Ser65-Asp66,
in tetracycline transport.
J.BIOL.CHEM. 265 15525-15530 (1990).
2. NGUYEN, T.T., POSTLE, K. AND BERTRAND, K.P.
Sequence homology between the tetracycline-resistance determinants of Tn10
AND pBR322.
GENE 25 83-92 (1983).
|
| Documentation | The transposon Tn10-encoded tetracycline resistance (Tcr) protein functions
as a metal-tetracycline/H+ antiporter [1,2]. The nucleotide sequence of the
Tn10 tetA gene, which alone is sufficient to confer tetracycline resistance,
has been determined [2]. The sequence similarity between the Tn10 tetA gene
and the pBR322 Tcr determinant indicates that these phenotypically distinct
Tcr determinants must have evolved from a common ancestral sequence [2]. The
markedly hydrophobic character of the predicted amino acid sequences of the
Tn10 tetA and pBR322 tet-coded proteins suggests that a substantial portion
of these proteins may be embedded within the cytoplasmic membrane [2].
The Ser65-Asp66 dipeptide is conserved in all known tetracycline antiporter
proteins [1]. Site-directed mutagenesis studes have shown that a negative
charge at position 66 is essential for tetracycline transport [1], and that
the region that includes the dipeptide plays an important role in metal-
tetracycline transport; it perhaps acts as a gate that opens on the charge-
charge interaction between Asp66 and the metal-tetracycline [1].
TCRTETA is a 12-element fingerprint that provides a signature for the TetA
class of tetracycline resistance proteins. The fingerprint was derived from
an initial alignment of 8 sequences: the motifs were drawn from conserved
regions spanning virtually the full alignment length - motif 1 includes the
C-terminal region of putative TM domain 1; and motifs 2-12 encode putative
TM domains 2-12 respectively. Two iterations on OWL30.2 were required to
reach convergence, at which point a true set comprising 9 sequences was
identified. Several partial matches were also found, all of which are
fragments and related drug resistance proteins that fail to match 5 or
more motifs.
An update on SPTR37_9f identified a true set of 10 sequences, and 7
partial matches.
|
| Summary Information | 10 codes involving 12 elements
0 codes involving 11 elements
0 codes involving 10 elements
0 codes involving 9 elements
0 codes involving 8 elements
0 codes involving 7 elements
0 codes involving 6 elements
1 codes involving 5 elements
0 codes involving 4 elements
2 codes involving 3 elements
4 codes involving 2 elements
|
| Composite Feature Index | | 12 | 10 | 10 | 10 | 10 | 10 | 10 | 10 | 10 | 10 | 10 | 10 | 10 | | 11 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | 10 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | 9 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | 8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | 7 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | 6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | 3 | 1 | 1 | 1 | 0 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | | 2 | 2 | 1 | 1 | 0 | 3 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 |
|
| True Positives | O88172 Q51569 Q52265 TCR1_ECOLI
TCR2_ECOLI TCR3_ECOLI TCR4_SALOR TCR5_ECOLI
TCR7_VIBAN TCR8_PASMU |
| True Positive Partials | |
| Sequence Titles | O88172 TETRACYCLINE RESISTANCE PROTEIN - INCQ PLASMID PIE1120.
Q51569 PLASMID RP4 TETA AND TETR GENES - PSEUDOMONAS AERUGINOSA.
Q52265 CLASS D TETRACYCLINE/H+ ANTIPORTER - PLASMID PRA1.
TCR1_ECOLI TETRACYCLINE RESISTANCE PROTEIN, CLASS A (TETA(A)) - ESCHERICHIA COLI.
TCR2_ECOLI TETRACYCLINE RESISTANCE PROTEIN, CLASS B (TETA(B)) (METAL- TETRACYCLINE/H+ ANTIPORTER) - ESCHERICHIA COLI.
TCR3_ECOLI TETRACYCLINE RESISTANCE PROTEIN, CLASS C (TETA(C)) - ESCHERICHIA COLI.
TCR4_SALOR TETRACYCLINE RESISTANCE PROTEIN, CLASS D (TETA(D)) - SALMONELLA ORDONEZ.
TCR5_ECOLI TETRACYCLINE RESISTANCE PROTEIN, CLASS E (TETA(E)) - ESCHERICHIA COLI.
TCR7_VIBAN TETRACYCLINE RESISTANCE PROTEIN, CLASS G (TETA(G)) - VIBRIO ANGUILLARUM.
TCR8_PASMU TETRACYCLINE RESISTANCE PROTEIN, CLASS H (TETA(H)) - PASTEURELLA MULTOCIDA.
Q48359 CODING SEQUENCE - ESCHERICHIA COLI.
NORA_STAAU QUINOLONE RESISTANCE NORA PROTEIN - STAPHYLOCOCCUS AUREUS.
O32603 NAPC PROTEIN - ENTEROCOCCUS HIRAE.
BMR1_BACSU MULTIDRUG RESISTANCE PROTEIN 1 (MULTIDRUG-EFFLUX TRANSPORTER 1) - BACILLUS SUBTILIS.
O21999 LACZ-ALPHA - BACTERIOPHAGE LAMBDA.
Q03325 FLUOROQUINOLONE RESISTANCE NORA1199 PROTEIN (ALELLE NORA1199) (ALLELE NORA1199(WT)) - STAPHYLOCOCCUS AUREUS.
Q53459 NORA - STAPHYLOCOCCUS AUREUS.
|
| Scan History | OWL30_2 1 50 NSINGLE
SPTR37_9f 2 24 NSINGLE
|
| Initial Motifs | Motif 1 width=17
Element Seqn Id St Int Rpt
LDAMGIGLIMPVLPTLL ISTN10 14 14 -
LDAIGIGLIMPVLPTLL TCR8_PASMU 14 14 -
LDAVGIGLIMPVLPGLL S38656 16 16 -
LDAVGIGLVMPVLPGLL TCR3_ECOLI 16 16 -
LDAVGIGLIMPVLPGLL TCR1_ECOLI 16 16 -
LDAMGIGLIMPVLPTLL TCR2_ECOLI 14 14 -
LDAMGIGIIMPVLPALL TCR5_ECOLI 14 14 -
LDAMGIGLIMPVLPSLL TCR4_SALOR 14 14 -
Motif 2 width=20
Element Seqn Id St Int Rpt
YGILLALYAVMQVCFAPLLG TCR4_SALOR 43 12 -
YGVLLALYAMMQVIFAPLLG TCR5_ECOLI 43 12 -
FGVLLALYALMQVIFAPWLG TCR2_ECOLI 43 12 -
FGVLLALYALMQVIFAPWLG ISTN10 43 12 -
YGILLALYALVQFACAPVLG S38656 45 12 -
YGVLLALYATMQVIFAPILG TCR8_PASMU 43 12 -
YGILLALYALMQFACAPVLG TCR1_ECOLI 45 12 -
YGVLLALYALMQFLCAPVLG TCR3_ECOLI 45 12 -
Motif 3 width=25
Element Seqn Id St Int Rpt
LLFSLLGAALDYLLMAFSTTLWMLY TCR8_PASMU 74 11 -
LLLSLIGASLDYLLLAFSSALWMLY TCR2_ECOLI 74 11 -
LLLSLLGATLDYALMATASVVWVLY TCR5_ECOLI 74 11 -
LLLSLAGAAFDYTLLALSNVLWMLY TCR4_SALOR 74 11 -
LLLSLIGASLDYLLLAFSSALWMLY ISTN10 74 11 -
LLASLLGATIDYAIMATTPVLWILY TCR3_ECOLI 76 11 -
LLVSLAGAAVDYAIMATAPFLWVLY TCR1_ECOLI 76 11 -
LLVSLAGATVDYAIMATAPFLWVLY S38656 76 11 -
Motif 4 width=22
Element Seqn Id St Int Rpt
RIVAGITGATGAVAGAYIADIT TCR3_ECOLI 103 2 -
RLLSGITGATGAVAASVIADTT TCR2_ECOLI 101 2 -
RIIAGITGATGAVCASAMSDVT TCR8_PASMU 101 2 -
RLLSGITGATGAVAASVIADTT ISTN10 101 2 -
RIVAGITGATGAVAGAYIADIT S38656 103 2 -
RLIAGITGATGAVAASTIADVT TCR5_ECOLI 101 2 -
RIISGITGATGAVAASVVADST TCR4_SALOR 101 2 -
RIVAGITGATGAVAGAYIADIT TCR1_ECOLI 103 2 -
Motif 5 width=23
Element Seqn Id St Int Rpt
FGFMSACFGFGMVAGPVLGGLMG TCR1_ECOLI 133 8 -
FGFMSACFGFGMVAGPVLGGLMG S38656 133 8 -
FGWLGASFGLGLIAGPIIGGFAG ISTN10 131 8 -
FGLMSACFGVGMVAGPVAGGLLG TCR3_ECOLI 133 8 -
FGRLGAAFGAGLIAGPAIGGLAG TCR4_SALOR 131 8 -
FGMMGACFGGGMIAGPVIGGFAG TCR5_ECOLI 131 8 -
FGWLGASFGLGLIAGPIIGGFAG TCR2_ECOLI 131 8 -
FGFLGGVFGVGLIIGPMLGGLLG TCR8_PASMU 131 8 -
Motif 6 width=21
Element Seqn Id St Int Rpt
APFLAAAVLNGLNLLLGCFLM TCR3_ECOLI 161 5 -
APFMFAAAINGLAFLVSLFIL TCR5_ECOLI 159 5 -
SPFFIAALLNIVTFLVVMFWF TCR2_ECOLI 159 5 -
SPFFIAALLNIVTFLVVMFWF ISTN10 159 5 -
APFFAAAALNGLNFLTGCFLL S38656 161 5 -
MPFIFAAISHSILLILSLLFF TCR8_PASMU 159 5 -
APFFAAAALNGLNFLTGCFLL TCR1_ECOLI 161 5 -
LPFVIAAILNACTFLMVFFIF TCR4_SALOR 159 5 -
Motif 7 width=18
Element Seqn Id St Int Rpt
FFIMQLVGQVPAALWVIF TCR1_ECOLI 219 37 -
FFIIQLIGQIPATLWVLF TCR5_ECOLI 218 38 -
FFTAQLIGQIPATVWVLF TCR4_SALOR 215 35 -
YFIIQLIGQIPATIWVLF TCR8_PASMU 218 38 -
YFSAQLIGQIPATVWVLF TCR2_ECOLI 217 37 -
YFSAQLIGQIPATVWVLF ISTN10 217 37 -
FFIMQLVGQVPAALWVIF S38656 219 37 -
FFIMQLVGQVPAALWVIF TCR3_ECOLI 219 37 -
Motif 8 width=21
Element Seqn Id St Int Rpt
VGFSLAGLGAMHALFQAVVAG TCR4_SALOR 244 11 -
VGFSLAGLGLLHSVFQAFVAG ISTN10 246 11 -
IGISLAAFGILHSLAQAMITG S38656 248 11 -
IGISLAAFGILHSLAQAMITG TCR1_ECOLI 248 11 -
IGLSLAVFGILHALAQAFVTG TCR3_ECOLI 248 11 -
VGVSLAVFGLTHALFQGLAAG TCR5_ECOLI 247 11 -
VGFSLAGLGLLHSVFQAFVAG TCR2_ECOLI 246 11 -
IGMSLAVLGVLHIFFQAIVAG TCR8_PASMU 247 11 -
Motif 9 width=22
Element Seqn Id St Int Rpt
ERRALMLGMIADGTGYILLAFA TCR1_ECOLI 276 7 -
EKQAIIAGMAADALGYVLLAFA TCR3_ECOLI 276 7 -
EKTIIFAGFIADATAFLLMSAI TCR4_SALOR 272 7 -
EKTTIMISMSIDMMGCLLLAWI TCR8_PASMU 275 7 -
EKTAVLLEFIADSSAFAFLAFI ISTN10 274 7 -
EKTAVLLGFIADSSAFAFLAFI TCR2_ECOLI 274 7 -
ERKAIAVGILADGCGLFLLAVI TCR5_ECOLI 275 7 -
ERRALMLGMIADGTGYILLAFA S38656 276 7 -
Motif 10 width=21
Element Seqn Id St Int Rpt
WMVYPVLILLAGGGIALPALQ TCR4_SALOR 297 3 -
WMAFPIMVLLASGGIGMPALQ S38656 301 3 -
WLDFPVLILLAGGGIALPALQ ISTN10 299 3 -
WMAFPIMVLLASGGIGMPALQ TCR1_ECOLI 301 3 -
WMAFPIMILLASGGIGMPALQ TCR3_ECOLI 301 3 -
WMVWPVLLLLACGGITLPALQ TCR5_ECOLI 300 3 -
WLVFPVLILLAGGGIALPALQ TCR2_ECOLI 299 3 -
WVILPALICLAAGGMGQPALQ TCR8_PASMU 300 3 -
Motif 11 width=24
Element Seqn Id St Int Rpt
LQGLLVSLTNATGVIGPLLFAVIY TCR2_ECOLI 334 14 -
LQGTLVSLTNITGIIGPLLFAFIY TCR8_PASMU 335 14 -
LQGSLAALTSLTSIVGPLLFTAIY TCR1_ECOLI 336 14 -
LQGSLAALTSLTSIVGPLLFTAIY S38656 336 14 -
LQGLLVSLTNATGVIGPLLFTVIY ISTN10 334 14 -
LQGSLAALTSLTSITGPLIVTAIY TCR3_ECOLI 336 14 -
LQGVLVSLTNLTGVAGPLLFAFIF TCR4_SALOR 332 14 -
LQGVLTSLTHLTAVIGPLVFAFLY TCR5_ECOLI 335 14 -
Motif 12 width=20
Element Seqn Id St Int Rpt
WDGWIWIIGLAFYCIIILLS TCR2_ECOLI 364 6 -
WNGWVWIIGCGLYVVALIIL TCR5_ECOLI 365 6 -
ADGTVWLIGTALYGLLLAIC TCR4_SALOR 362 6 -
WNGLAWIVGAALYLVCLPAL TCR3_ECOLI 366 6 -
WNGWAWIAGAALYLLCLPAL TCR1_ECOLI 366 6 -
WNGWAWIAGAALYLLCLPAL S38656 366 6 -
WDGLLWLMGAILYAMLLITA TCR8_PASMU 365 6 -
WDGWIWIIGLAFYCIIILLS ISTN10 364 6 -
|
| Final Motifs | Motif 1 width=17
Element Seqn Id St Int Rpt
LDAVGIGLIMPVLPGLL TCR1_ECOLI 16 16 -
LDAVGIGLIMPVLPGLL Q51569 16 16 -
LDAMGLGLIMPVLPTLL TCR7_VIBAN 14 14 -
LDAVGIGLVMPVLPGLL TCR3_ECOLI 16 16 -
LDAMGIGLIMPVLPSLL Q52265 14 14 -
LDAMGIGLIMPVLPSLL TCR4_SALOR 14 14 -
LDAMGIGIIMPVLPALL TCR5_ECOLI 14 14 -
LDAMGIGLIMPVLPTLL TCR2_ECOLI 14 14 -
LDAIGLGLIMPVVPALL O88172 14 14 -
LDAIGIGLIMPVLPTLL TCR8_PASMU 14 14 -
Motif 2 width=20
Element Seqn Id St Int Rpt
YGILLALYALMQFACAPVLG TCR1_ECOLI 45 12 -
YGILLALYALVQFACAPVLG Q51569 45 12 -
YGALLSLYALMQVVFAPMLG TCR7_VIBAN 43 12 -
YGVLLALYALMQFLCAPVLG TCR3_ECOLI 45 12 -
YGILLALYAVMQVCFAPLLG Q52265 43 12 -
YGILLALYAVMQVCFAPLLG TCR4_SALOR 43 12 -
YGVLLALYAMMQVIFAPLLG TCR5_ECOLI 43 12 -
FGVLLALYALMQVIFAPWLG TCR2_ECOLI 43 12 -
YGVFLSLYAFMQVFCAPVLG O88172 43 12 -
YGVLLALYATMQVIFAPILG TCR8_PASMU 43 12 -
Motif 3 width=25
Element Seqn Id St Int Rpt
LLVSLAGAAVDYAIMATAPFLWVLY TCR1_ECOLI 76 11 -
LLVSLAGATVDYAIMATAPFLWVLY Q51569 76 11 -
LLASLAGAAVDYTIMASAPVLWVLY TCR7_VIBAN 74 11 -
LLASLLGATIDYAIMATTPVLWILY TCR3_ECOLI 76 11 -
LLLSLAGAAFDYTLLALSNVLWMLY Q52265 74 11 -
LLLSLAGAAFDYTLLALSNVLWMLY TCR4_SALOR 74 11 -
LLLSLLGATLDYALMATASVVWVLY TCR5_ECOLI 74 11 -
LLLSLIGASLDYLLLAFSSALWMLY TCR2_ECOLI 74 11 -
LLVSFLGATIDYSIMAAAPVLWVLY O88172 74 11 -
LLFSLLGAALDYLLMAFSTTLWMLY TCR8_PASMU 74 11 -
Motif 4 width=22
Element Seqn Id St Int Rpt
RIVAGITGATGAVAGAYIADIT TCR1_ECOLI 103 2 -
RIVAGITGATGAVAGAYIADIT Q51569 103 2 -
RLVSGVTGATGAVAASTIADST TCR7_VIBAN 101 2 -
RIVAGITGATGAVAGAYIADIT TCR3_ECOLI 103 2 -
RIISGITGATGAVAASVVADST Q52265 101 2 -
RIISGITGATGAVAASVVADST TCR4_SALOR 101 2 -
RLIAGITGATGAVAASTIADVT TCR5_ECOLI 101 2 -
RLLSGITGATGAVAASVIADTT TCR2_ECOLI 101 2 -
RIISGVTGATGAIAASIIADTT O88172 101 2 -
RIIAGITGATGAVCASAMSDVT TCR8_PASMU 101 2 -
Motif 5 width=23
Element Seqn Id St Int Rpt
FGFMSACFGFGMVAGPVLGGLMG TCR1_ECOLI 133 8 -
FGFMSACFGFGMVAGPVLGGLMG Q51569 133 8 -
FGYMGACYGAGMIAGPALGGMLG TCR7_VIBAN 131 8 -
FGLMSACFGVGMVAGPVAGGLLG TCR3_ECOLI 133 8 -
FGRLGAAFGAGLIAGPAIGGLAG Q52265 131 8 -
FGRLGAAFGAGLIAGPAIGGLAG TCR4_SALOR 131 8 -
FGMMGACFGGGMIAGPVIGGFAG TCR5_ECOLI 131 8 -
FGWLGASFGLGLIAGPIIGGFAG TCR2_ECOLI 131 8 -
FGFMGACFGAGMIAGPAIGGVLG O88172 131 8 -
FGFLGGVFGVGLIIGPMLGGLLG TCR8_PASMU 131 8 -
Motif 6 width=21
Element Seqn Id St Int Rpt
APFFAAAALNGLNFLTGCFLL TCR1_ECOLI 161 5 -
APFFAAAALNGLNFLTGCFLL Q51569 161 5 -
APFIAAALLNGFAFLLACIFL TCR7_VIBAN 159 5 -
APFLAAAVLNGLNLLLGCFLM TCR3_ECOLI 161 5 -
LPFVIAAILNACTFLMVFFIF Q52265 159 5 -
LPFVIAAILNACTFLMVFFIF TCR4_SALOR 159 5 -
APFMFAAAINGLAFLVSLFIL TCR5_ECOLI 159 5 -
SPFFIAALLNIVTFLVVMFWF TCR2_ECOLI 159 5 -
APFVAGALLNAIAFCLVAFLL O88172 159 5 -
MPFIFAAISHSILLILSLLFF TCR8_PASMU 159 5 -
Motif 7 width=18
Element Seqn Id St Int Rpt
FFIMQLVGQVPAALWVIF TCR1_ECOLI 219 37 -
FFIMQLVGQVPAALWVIF Q51569 219 37 -
FFIIQLIGQVPAALWVIY TCR7_VIBAN 217 37 -
FFIMQLVGQVPAALWVIF TCR3_ECOLI 219 37 -
FFTAQLIGQIPATVWVLF Q52265 215 35 -
FFTAQLIGQIPATVWVLF TCR4_SALOR 215 35 -
FFIIQLIGQIPATLWVLF TCR5_ECOLI 218 38 -
YFSAQLIGQIPATVWVLF TCR2_ECOLI 217 37 -
FFLMQLIGQAPAALWVIY O88172 216 36 -
YFIIQLIGQIPATIWVLF TCR8_PASMU 218 38 -
Motif 8 width=21
Element Seqn Id St Int Rpt
IGISLAAFGILHSLAQAMITG TCR1_ECOLI 248 11 -
IGISLAAFGILHSLAQAMITG Q51569 248 11 -
VGLSLAAFGATHAIFQAFVTG TCR7_VIBAN 246 11 -
IGLSLAVFGILHALAQAFVTG TCR3_ECOLI 248 11 -
VGFSLAGLGAMHALFQAVVAG Q52265 244 11 -
VGFSLAGLGAMHALFQAVVAG TCR4_SALOR 244 11 -
VGVSLAVFGLTHALFQGLAAG TCR5_ECOLI 247 11 -
VGFSLAGLGLLHSVFQAFVAG TCR2_ECOLI 246 11 -
AGVSLAVFGAAHTFVQAVLTG O88172 245 11 -
IGMSLAVLGVLHIFFQAIVAG TCR8_PASMU 247 11 -
Motif 9 width=22
Element Seqn Id St Int Rpt
ERRALMLGMIADGTGYILLAFA TCR1_ECOLI 276 7 -
ERRALMLGMIADGTGYILLAFA Q51569 276 7 -
ERRTLLFGMAADGTGFVLLAFA TCR7_VIBAN 274 7 -
EKQAIIAGMAADALGYVLLAFA TCR3_ECOLI 276 7 -
EKTIIFAGFIADATAFLLMSAI Q52265 272 7 -
EKTIIFAGFIADATAFLLMSAI TCR4_SALOR 272 7 -
ERKAIAVGILADGCGLFLLAVI TCR5_ECOLI 275 7 -
EKTAVLLGFIADSSAFAFLAFI TCR2_ECOLI 274 7 -
DRGVLLLGMGADMCGFLLLAFI O88172 273 7 -
EKTTIMISMSIDMMGCLLLAWI TCR8_PASMU 275 7 -
Motif 10 width=21
Element Seqn Id St Int Rpt
WMAFPIMVLLASGGIGMPALQ TCR1_ECOLI 301 3 -
WMAFPIMVLLASGGIGMPALQ Q51569 301 3 -
WMVFPILLLLAAGGVGMPALQ TCR7_VIBAN 299 3 -
WMAFPIMILLASGGIGMPALQ TCR3_ECOLI 301 3 -
WMVYPVLILLAGGGIALPALQ Q52265 297 3 -
WMVYPVLILLAGGGIALPALQ TCR4_SALOR 297 3 -
WMVWPVLLLLACGGITLPALQ TCR5_ECOLI 300 3 -
WLVFPVLILLAGGGIALPALQ TCR2_ECOLI 299 3 -
WMVLPAIFMLATGGIGMPALQ O88172 298 3 -
WVILPALICLAAGGMGQPALQ TCR8_PASMU 300 3 -
Motif 11 width=24
Element Seqn Id St Int Rpt
LQGSLAALTSLTSIVGPLLFTAIY TCR1_ECOLI 336 14 -
LQGSLAALTSLTSIVGPLLFTAIY Q51569 336 14 -
LQGTLTSLTNLSSIAGPLGFTALY TCR7_VIBAN 334 14 -
LQGSLAALTSLTSITGPLIVTAIY TCR3_ECOLI 336 14 -
LQGVLVSLTNLTGVAGPLLFAFIF Q52265 332 14 -
LQGVLVSLTNLTGVAGPLLFAFIF TCR4_SALOR 332 14 -
LQGVLTSLTHLTAVIGPLVFAFLY TCR5_ECOLI 335 14 -
LQGLLVSLTNATGVIGPLLFAVIY TCR2_ECOLI 334 14 -
LQGTLTGLTNITSIIGPVGFTTLY O88172 333 14 -
LQGTLVSLTNITGIIGPLLFAFIY TCR8_PASMU 335 14 -
Motif 12 width=20
Element Seqn Id St Int Rpt
WNGWAWIAGAALYLLCLPAL TCR1_ECOLI 366 6 -
WNGWAWIAGAALYLLCLPAL Q51569 366 6 -
WNGWVWIVGAILYLICLPIL TCR7_VIBAN 364 6 -
WNGLAWIVGAALYLVCLPAL TCR3_ECOLI 366 6 -
ADGTVWLIGTALYGLLLAIC Q52265 362 6 -
ADGTVWLIGTALYGLLLAIC TCR4_SALOR 362 6 -
WNGWVWIIGCGLYVVALIIL TCR5_ECOLI 365 6 -
WDGWIWIIGLAFYCIIILLS TCR2_ECOLI 364 6 -
WDGWVWLVAASLYLIAIPLL O88172 363 6 -
WDGLLWLMGAILYAMLLITA TCR8_PASMU 365 6 -
|