Identifier | TBOX  [View Relations]  [View Alignment]  
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Accession | PR00937 |
No. of Motifs | 6 |
Creation Date | 18-SEP-1998  (UPDATE 18-JUN-1999) |
Title | T-Box domain signature |
Database References | PRINTS; PR00938 BRACHYURY PROSITE; PS01283 TBOX_1; PS01264 TBOX_2 BLOCKS; BL01283 PFAM; PF00907 T-box INTERPRO; IPR001699 PDB; 1XBR SCOP; 1XBR CATH; 1XBR |
Literature References | 1. PAPAIOANNOU, V. E. AND SILVER L.M.
The T-box gene family.
BIOESSAYS 20(1) 9-19 (1998).
2. WATTLER, S., RUSS, A., EVANS, M. AND NEHLS, M.
A combined analysis of genomic and primary protein structure defines the
phylogenetic relationship of new members of the T-box family.
GENOMICS 48 24-33 (1998).
3. KAVKA, A.I. AND GREEN, J.B.A.
Tales of Tails: Brachyury and the T-box genes.
BIOCHIM.BIOPHYS.ACTA 1333 f73-f84 (1997).
4. PAPAIOANNOU, V.E.
T-box family reunion.
TRENDS GENET. 13(6) 212-213 (1997).
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Documentation | The T-box gene family is an ancient group of putative transcription
factors that appear to play a critical role in the development of all
animal species.
These genes were uncovered on the basis of similarity to the DNA binding
domain [1] of murine Brachyury (T) gene product, which similarity is the
defining feature of the family. The Brachyury gene is named for its
phenotype, which was identified 70 years ago as a mutant mouse strain with
a short blunted tail. The gene, and its paralogues, have become a well-
studied model for the family, and hence much of what is known about the
T-box family is derived from the murine Brachyury gene.
Consistent with its nuclear location, Brachyury protein has a sequence-
specific DNA-binding activity and can act as a transcriptional regulator
[2]. Homozygous mutants for the gene undergo extensive developmental
anomalies, thus rendering the mutation lethal [3]. The postulated role of
Brachyury is as a transcription factor, regulating the specification and
differentiation of posterior mesoderm during gastrulation in a dose-
dependent manner [1].
Common features shared by T-box family members are, DNA-binding and
transcriptional regulatory activity, a role in development and conserved
expression patterns, most of the known genes in all species being expressed
in mesoderm of mesoderm precursors [4].
TBOX is a 6-element fingerprint that provides a signature for the T-box
domain. The fingerprint was derived from an initial alignment of 23
sequences: the motifs were drawn from conserved regions spanning the
DNA-binding domain - motif 1 spans beta-strands 2-4 and includes part of
the region encoded by PROSITE pattern TBOX_1 (PS01283); motifs 2 and 3 span
part of the sequence encoded by PROSITE pattern TBOX_2 (PS01264), including
strands 8-11 and helix 2; motif 4 includes strand 13; and motif 5 spans
strand 15 and the N-terminal residues of helix 4. Two iterations on OWL30.2
were required to reach convergence, at which point a true set comprising 50
sequences was identified. Several partial matches were also found, all of
which are fragments.
An update on SPTR37_9f identified a true set of 46 sequences, and 7
partial matches.
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Summary Information | 46 codes involving 6 elements 0 codes involving 5 elements 0 codes involving 4 elements 0 codes involving 3 elements 2 codes involving 2 elements
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Composite Feature Index | 6 | 46 | 46 | 46 | 46 | 46 | 46 | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 2 | 1 | 0 | 0 | 1 | 0 | | 1 | 2 | 3 | 4 | 5 | 6 |
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True Positives | BRA1_BRAFL BRA2_BRAFL BRAC_BRARE BRAC_CHICK BRAC_HALRO BRAC_HEMPU BRAC_MOUSE BRAC_XENLA BRC2_HALRO BYN_DROME EOMD_XENLA H15_DROME O13161 O15178 O15301 O17212 O17276 O42100 O43435 O43436 O43891 O54840 O57386 O62535 O70306 O73718 O73719 O93288 O93303 O93389 OMB_DROME Q23467 TBR1_HUMAN TBR1_MOUSE TBX2_CAEEL TBX2_HUMAN TBX2_MOUSE TBX5_HUMAN TBX6_BRARE TBX6_MOUSE TBX8_CAEEL TBX9_CAEEL TBXT_CHICK TX12_CAEEL VEGT_XENLA YPX4_CAEEL |
True Positive Partials | |
Sequence Titles | BRA1_BRAFL BRACHYURY PROTEIN HOMOLOG 1 (AMBRA-1) - BRANCHIOSTOMA FLORIDAE (FLORIDA LANCELET) (AMPHIOXUS). BRA2_BRAFL BRACHYURY PROTEIN HOMOLOG 2 (AMBRA-2) - BRANCHIOSTOMA FLORIDAE (FLORIDA LANCELET) (AMPHIOXUS). BRAC_BRARE BRACHYURY PROTEIN HOMOLOG (T PROTEIN HOMOLOG) (T-BOX PROTEIN ZFT) (ZF- T) - BRACHYDANIO RERIO (ZEBRAFISH) (ZEBRA DANIO). BRAC_CHICK BRACHYURY PROTEIN (T PROTEIN) - GALLUS GALLUS (CHICKEN). BRAC_HALRO BRACHYURY PROTEIN HOMOLOG (T PROTEIN) (AS-T) - HALOCYNTHIA RORETZI (SEA SQUIRT). BRAC_HEMPU BRACHYURY PROTEIN HOMOLOG (T PROTEIN) (HPTA) - HEMICENTROTUS PULCHERRIMUS (SEA URCHIN). BRAC_MOUSE BRACHYURY PROTEIN (T PROTEIN) - MUS MUSCULUS (MOUSE). BRAC_XENLA BRACHYURY PROTEIN (T PROTEIN) (XBRA) - XENOPUS LAEVIS (AFRICAN CLAWED FROG). BRC2_HALRO T-BOX CONTAINING PROTEIN 2 (AS-T2) - HALOCYNTHIA RORETZI (SEA SQUIRT). BYN_DROME T-RELATED PROTEIN (TRP) (BRACHYENTERON PROTEIN) - DROSOPHILA MELANOGASTER (FRUIT FLY). EOMD_XENLA EOMESODERMIN - XENOPUS LAEVIS (AFRICAN CLAWED FROG). H15_DROME T-BOX PROTEIN H15 - DROSOPHILA MELANOGASTER (FRUIT FLY). O13161 T-BOX PROTEIN - XENOPUS LAEVIS (AFRICAN CLAWED FROG). O15178 BRACHYURY PROTEIN (T PROTEIN) - HOMO SAPIENS (HUMAN). O15301 TRANSCRIPTION FACTOR TBX5 - HOMO SAPIENS (HUMAN). O17212 H14A12.4 PROTEIN - CAENORHABDITIS ELEGANS. O17276 T27A1.6 PROTEIN - CAENORHABDITIS ELEGANS. O42100 ME-TAM - ORYZIAS LATIPES (MEDAKA FISH). O43435 TBX1 PROTEIN (T-BOX PROTEIN 1) (TESTIS-SPECIFIC T-BOX PROTEIN) - HOMO SAPIENS (HUMAN). O43436 TBX1 PROTEIN (T-BOX PROTEIN 1) (TESTIS-SPECIFIC T-BOX PROTEIN) - HOMO SAPIENS (HUMAN). O43891 TRANSCRIPTION FACTOR T-BOX 5. O54840 TBX15 PROTEIN (T-BOX PROTEIN 15) - MUS MUSCULUS (MOUSE). O57386 BRACHYURY - CYNOPS PYRRHOGASTER (JAPANESE COMMON NEWT). O62535 OPTOMOTOR-BLIND-RELATED PROTEIN-1 - DROSOPHILA MELANOGASTER (FRUIT FLY). O70306 TBX15 PROTEIN (T-BOX PROTEIN 15) - MUS MUSCULUS (MOUSE). O73718 T-BOX PROTEIN 3 (T-BOX TRANSCRIPTION FACTOR TBX3) - GALLUS GALLUS (CHICKEN). O73719 T-BOX PROTEIN 5 (T-BOX TRANSCRIPTION FACTOR TBX5) - GALLUS GALLUS (CHICKEN). O93288 T-BOX PROTEIN 4 (T-BOX TRANSCRIPTION FACTOR TBX4) - GALLUS GALLUS (CHICKEN). O93303 T-BOX CONTAINING PROTEIN - BRACHYDANIO RERIO (ZEBRAFISH) (ZEBRA DANIO). O93389 SPADETAIL - BRACHYDANIO RERIO (ZEBRAFISH) (ZEBRA DANIO). OMB_DROME OPTOMOTOR-BLIND PROTEIN (LETHAL(1)OPTOMOTOR-BLIND) (L(1)OMB) (BIFID PROTEIN) - DROSOPHILA MELANOGASTER (FRUIT FLY). Q23467 COSMID ZK328 - CAENORHABDITIS ELEGANS. TBR1_HUMAN T-BRAIN-1 PROTEIN (T-BOX BRAIN PROTEIN 1) (TBR-1) (TES-56) - HOMO SAPIENS (HUMAN). TBR1_MOUSE T-BRAIN-1 PROTEIN (T-BOX BRAIN PROTEIN 1) (TBR-1) (TES-56) - MUS MUSCULUS (MOUSE). TBX2_CAEEL T-BOX PROTEIN 2 - CAENORHABDITIS ELEGANS. TBX2_HUMAN TBX2 PROTEIN (T-BOX PROTEIN 2) - HOMO SAPIENS (HUMAN). TBX2_MOUSE TBX2 PROTEIN (T-BOX PROTEIN 2) - MUS MUSCULUS (MOUSE). TBX5_HUMAN TBX5 PROTEIN (T-BOX PROTEIN 5) - HOMO SAPIENS (HUMAN). TBX6_BRARE TBX6 PROTEIN (T-BOX PROTEIN 6) - BRACHYDANIO RERIO (ZEBRAFISH) (ZEBRA DANIO). TBX6_MOUSE TBX6 PROTEIN (T-BOX PROTEIN 6) - MUS MUSCULUS (MOUSE). TBX8_CAEEL T-BOX PROTEIN 8 - CAENORHABDITIS ELEGANS. TBX9_CAEEL T-BOX PROTEIN 9 - CAENORHABDITIS ELEGANS. TBXT_CHICK T-BOX CONTAINING PROTEIN TBXT - GALLUS GALLUS (CHICKEN). TX12_CAEEL T-BOX PROTEIN 12 - CAENORHABDITIS ELEGANS. VEGT_XENLA T-BOX PROTEIN VEGT (T-BOX PROTEIN BRAT) (T-BOX PROTEIN ANTIPODEAN) - XENOPUS LAEVIS (AFRICAN CLAWED FROG). YPX4_CAEEL HYPOTHETICAL 36.5 KD PROTEIN F40H6 IN CHROMOSOME III - CAENORHABDITIS ELEGANS. O02073 SIMILAR TO THE BRACHYURY PROTEIN - CAENORHABDITIS ELEGANS. YS4A_CAEEL HYPOTHETICAL 21.5 KD PROTEIN ZK177.10 IN CHROMOSOME II - CAENORHABDITIS ELEGANS.
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Scan History | OWL30_2 2 250 NSINGLE SPTR37_9f 3 200 NSINGLE
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Initial Motifs | Motif 1 width=25 Element Seqn Id St Int Rpt GTEMIITKSGRRMFPTVRVSFSGPL H15_DROME 178 178 - DNEMVITVNGRRIFPTLEYTVTGLD YPX4_CAEEL 24 24 - GTEMIVTKAGRRMFPTFQVKLFGMD TBX1_MOUSE 9 9 - VNEMIVTKNGRKLFPKLEYIVEGLD YNS6_CAEEL 108 108 - KNEMIVTKSGRKMFPKLEYVVRGLT YNS2_CAEEL 137 137 - GTEMIITKKGRRMFPLVKLKLSGLD CELZK3286 410 410 - GTEMVITKSGRRMFPPFKVRCSGLD TBX3_MOUSE 9 9 - GTEMVITKSGRRMFPPFKVRVSGLD TBX2_HUMAN 112 112 - GTEMVITKSGRRMFPPFKVRVSGLD TBX2_MOUSE 112 112 - TNEMIVTKSGRRMFPVLKVNVSGLD BRA2_BRAFL 52 52 - TNEMIVTKNGRRMFPVLKVNVSGLD BRA1_BRAFL 62 62 - VTEMIITKAGRRMFPSYKVKVTGIN TBX5_HUMAN 68 68 - TNEMIVTKTGRRMFPVLRASVTGLD BRAC_BRARE 52 52 - QTEMIITKQGRRMFPFLSFNISGLD TBR1_HUMAN 221 221 - GTEMVITKSGRQMFPQMKFRVSGLD OMB_DROME 345 345 - GTEMIITKAGRRMFPACRVSVTGLD TBX6_MOUSE 108 108 - GTEMLITKSGRRMFPSCKVTVTGLN TBX6_BRARE 51 51 - QTEMIITKQGRRMFPFLSFNITGLN EOMD_XENLA 271 271 - TNEMIVTKNGRRMFPVVKISASGLD BYN_DROME 104 104 - TNEMIVTKSGRRMFPVLSASIAGLD BRAC_HEMPU 58 58 - GTEMIITKSGRRMFPQCKIRLFGLH VEGT_XENLA 65 65 - GTEMIITKSGRRMFPTVKVSFTNVI TX12_CAEEL 94 94 - GTEMIVTKTGRRMFPGYRIKISGLD BRC2_HALRO 157 157 - Motif 2 width=14 Element Seqn Id St Int Rpt YVHPESPNTGAHWM EOMD_XENLA 337 41 - FIHPDSPAPGQKWM TBX6_BRARE 116 40 - YIHPDSPATGEQWM TBX2_HUMAN 177 40 - YIHPDSPATGEQWM TBX2_MOUSE 177 40 - YIHPDSPNFGAHWM BRA2_BRAFL 117 40 - YIHPDSPNFGAHWM BRA1_BRAFL 127 40 - HYHPDSPAKGAQWM TBX1_MOUSE 76 42 - MWHADGVRKGSDWM YNS6_CAEEL 173 40 - LWHADGVRSGKEWM YNS2_CAEEL 202 40 - FVHPQSPRSGEWWM CELZK3286 475 40 - YIHPDSPATGAHWM TBX6_MOUSE 173 40 - YIHPDSPTTGEQWM OMB_DROME 410 40 - YMHPDSPNTGAHWM TBR1_HUMAN 287 41 - YIHPDSPNFGAHWM BRAC_BRARE 117 40 - YIHPDSPATGEQWM TBX3_MOUSE 73 39 - YVHPDSPATGAHWM TBX5_HUMAN 133 40 - VWHHNGSQTGKDWM YPX4_CAEEL 89 40 - YAHPDCPLSPEALR H15_DROME 249 46 - FLHPNSPANGSKWM BRC2_HALRO 222 40 - YLHPDSPFTGDQLL TX12_CAEEL 161 42 - YVHPDSPAPGAHWM VEGT_XENLA 130 40 - YIHPDSPNFGAHWM BRAC_HEMPU 123 40 - YVHPESPNFGAHWM BYN_DROME 169 40 - Motif 3 width=10 Element Seqn Id St Int Rpt VSFSKVKLTN BRA1_BRAFL 144 3 - VTFHKLKLTN TBX3_MOUSE 90 3 - VSFDKLKLTN TBX1_MOUSE 93 3 - ICFDRVKISN YNS6_CAEEL 190 3 - VCFDRVKITN YNS2_CAEEL 219 3 - VDFKMAKLSN CELZK3286 492 3 - VAFHKLKLTN TBX2_HUMAN 194 3 - VAFHKLKLTN TBX2_MOUSE 194 3 - VSFSKVKLTN BRA2_BRAFL 134 3 - VSFQKLKLTN TBX5_HUMAN 150 3 - VSFSKVKLSN BRAC_BRARE 134 3 - ISFGKLKLTN TBR1_HUMAN 304 3 - VSFHKLKLTN OMB_DROME 427 3 - VSFHRVKLTN TBX6_MOUSE 190 3 - ISFHKLKLTN TBX6_BRARE 133 3 - ISFGKLKLTN EOMD_XENLA 354 3 - ISFAKVKLTN BYN_DROME 186 3 - VNFSKVKLSN BRAC_HEMPU 140 3 - ICFQKLKLTN VEGT_XENLA 147 3 - ISFEKTKLTN TX12_CAEEL 178 3 - ISFHKVKLTN BRC2_HALRO 239 3 - VSFEKVKLTN H15_DROME 266 3 - VSFDQIRITN YPX4_CAEEL 106 3 - Motif 4 width=15 Element Seqn Id St Int Rpt ILHSMHKYQPRIHLV TBX6_MOUSE 209 9 - ILNSMHRYQPRFHVV TBX1_MOUSE 112 9 - YLNSMHKYIPVLTIY YNS6_CAEEL 210 10 - FLHSMHKYTPVMSIY YNS2_CAEEL 239 10 - VLNSMHRYNPRFHIV CELZK3286 511 9 - ILNSMHKYQPRFHIV TBX3_MOUSE 109 9 - HLLTQHRYIPVLTIY YPX4_CAEEL 128 12 - VLNSMHRYQPRIHLV H15_DROME 285 9 - VLNSMHRYQPRVHIV BRC2_HALRO 259 10 - ILNSMHKYQPRIHIV TX12_CAEEL 197 9 - ILHSMHRYKPRFHVV VEGT_XENLA 166 9 - MLNSLHKYEPRIHII BRAC_HEMPU 158 8 - MLNSLHKYEPRVHLV BYN_DROME 204 8 - VLQSLHKYQPRLHIV EOMD_XENLA 376 12 - VLHSMHKYQPRLHIV TBX6_BRARE 152 9 - ILNSMHKYQPRFHIV TBX2_HUMAN 213 9 - ILNSMHKYQPRFHIV TBX2_MOUSE 213 9 - MLNSLHKYEPRIHIV BRA2_BRAFL 153 9 - MLNSLHKYEPRLHII BRA1_BRAFL 162 8 - ILNSMHKYQPRLHIV TBX5_HUMAN 169 9 - MLNSLHKYEPRIHIV BRAC_BRARE 152 8 - VLQSLHKYQPRLHVV TBR1_HUMAN 326 12 - ILNSMHKYQPRFHLV OMB_DROME 449 12 - Motif 5 width=14 Element Seqn Id St Int Rpt AAFIAVTAYQNQEI TBX6_BRARE 188 21 - TDFIAVTAYQNDKI TBX2_HUMAN 248 20 - TDFIAVTAYQNDKI TBX2_MOUSE 248 20 - TQFIAVTAYQNEEL BRA2_BRAFL 186 18 - TQFIAVTAYQNEEI BRA1_BRAFL 195 18 - TAFIAVTSYQNHKI TBX5_HUMAN 206 22 - TQFIAVTAYQNEEI BRAC_BRARE 183 16 - TQFIAVTAYQNTDI TBR1_HUMAN 364 23 - TEFIAVTAYQNEKI OMB_DROME 484 20 - TTFISVTAYQNPRI TBX6_MOUSE 244 20 - NQFIAVTAYQNTDI EOMD_XENLA 414 23 - TQFIAVTAYQNEEV BYN_DROME 235 16 - TRFIAVTAYQNEDI BRAC_HEMPU 191 18 - TEFTSVTAYQNEKI VEGT_XENLA 201 20 - TQFMAVTAYQNQLI TX12_CAEEL 239 27 - TVFITVTAYQNSEV BRC2_HALRO 294 20 - TVFTAVTAYQNQLI H15_DROME 327 27 - SQFISVTAYHKGEL YPX4_CAEEL 156 13 - TEFIAVTAYQNDVV CELZK3286 546 20 - TEFIAVTAYQNDAV YNS2_CAEEL 279 25 - TEFIAVTAYQNQKI YNS6_CAEEL 250 25 - TRFTAVTAYQNHRI TBX1_MOUSE 150 23 - TEFIAVTAYQNDKI TBX3_MOUSE 144 20 - Motif 6 width=9 Element Seqn Id St Int Rpt NPFAKGFRD TBX2_MOUSE 269 7 - NPYSTGSRK YPX4_CAEEL 177 7 - NPFAKGFRD H15_DROME 348 7 - NPFAKGFRE BRC2_HALRO 315 7 - NPFAKGFRD TX12_CAEEL 260 7 - NPFAKGFRE VEGT_XENLA 222 7 - NPFAKAFLD BRAC_HEMPU 212 7 - NPFAKAFLD BYN_DROME 256 7 - NPFAKGFRD EOMD_XENLA 435 7 - NPFAKGFRD TBX6_BRARE 209 7 - NPFAKAFLD BRA2_BRAFL 207 7 - NPFAKAFLD BRA1_BRAFL 216 7 - NPFAKGLRD OMB_DROME 505 7 - NPFAKGFRD TBR1_HUMAN 385 7 - NPFAKGFRD TBX2_HUMAN 269 7 - NPFAKGFRN CELZK3286 567 7 - NPFAKGFRE YNS2_CAEEL 300 7 - NSFAKGFRD YNS6_CAEEL 271 7 - NPFAKGFRD TBX1_MOUSE 171 7 - NPFAKGFRE TBX6_MOUSE 265 7 - NPFAKGFRD TBX3_MOUSE 165 7 - NPFAKAFLD BRAC_BRARE 204 7 - NPFAKGFRG TBX5_HUMAN 227 7 -
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Final Motifs | Motif 1 width=25 Element Seqn Id St Int Rpt TNEMIVTKNGRRMFPVLKVNVSGLD BRAC_MOUSE 59 59 - TNEMIVTKNGRRMFPVLKVNVSGLD O15178 59 59 - TNEMIVTKNGRRMFPVLKVSMSGLD BRAC_XENLA 57 57 - GTEMIITKAGRRMFPSYKVKVTGLN O73719 88 88 - GTEMIITKAGRRMFPSYKVKVTGLN O43891 71 71 - GTEMIITKAGRRMFPSYKVKVTGLN O15301 71 71 - TNEMIVTKNGRRMFPVLKLNVSGLD O57386 61 61 - TNEMIVTKNGRRMFPVLKVSVSGLD BRAC_CHICK 57 57 - GTEMVITKSGRRMFPPFKVRVSGLD TBX2_HUMAN 112 112 - GTEMVITKSGRRMFPPFKVRVSGLD TBX2_MOUSE 112 112 - TNEMIVTKSGRRMFPVLKVNVSGLD BRA2_BRAFL 52 52 - TNEMIVTKNGRRMFPVLKVNVSGLD BRA1_BRAFL 62 62 - GTEMVITKSGRRMFPPFKVRCTGLD O73718 122 122 - VTEMIITKAGRRMFPSYKVKVTGIN TBX5_HUMAN 68 68 - GTEMIITKAGRRMFPSYKVKVTGMN O93288 74 74 - TNEMIVTKTGRRMFPVLRASVSGLD O42100 52 52 - TNEMIVTKTGRRMFPVLRASVTGLD BRAC_BRARE 52 52 - TNEMIVTKNGRRMFPVLKISVSGLD TBXT_CHICK 56 56 - QTEMIITKQGRRMFPFLSFNISGLD TBR1_MOUSE 221 221 - QTEMIITKQGRRMFPFLSFNISGLD TBR1_HUMAN 221 221 - GTEMVITKSGRQMFPQMKFRVSGLD OMB_DROME 345 345 - GTEMIITKPGRRMFPHCKISLSGLV O93303 48 48 - GTEMIITKPGRRMFPHCKISLSGLV O93389 48 48 - GTEMIITKAGRRMFPACRVSVTGLD TBX6_MOUSE 108 108 - GTEMIVTKAGRRMFPTFQVKLFGMD O43436 127 127 - GTEMIVTKAGRRMFPTFQVKLFGMD O43435 127 127 - GTEMVITKSGRRIFPAYRVKISGLD TBX2_CAEEL 78 78 - GTEMLITKSGRRMFPSCKVTVTGLN TBX6_BRARE 51 51 - QTEMIITKQGRRMFPFLSFNITGLN EOMD_XENLA 271 271 - GTEMIITKTGRRMFPTFQVRIGGLD O62535 213 213 - TNEMIVTKSGRRMFPVLKLTASGLE BRAC_HALRO 32 32 - TNEMIVTKNGRRMFPVVKISASGLD BYN_DROME 104 104 - GTEMIITKSGRRMFPQCKIRLFGLH O13161 65 65 - GTEMIITKAGRRMFPAMRVKITGLD O70306 130 130 - GTEMIITKAGRRMFPAMRVKITGLD O54840 87 87 - TNEMIVTKSGRRMFPVLSASIAGLD BRAC_HEMPU 58 58 - GTEMIVTKSGRRMFPTLSVIIAGLD O17212 48 48 - GTEMIITKSGRRMFPQCKIRLFGLH VEGT_XENLA 65 65 - GTEMIITKSGRRMFPTVKVSFTNVI TX12_CAEEL 94 94 - GTEMIITKSGRRMFPTVKVSFTNVI O17276 94 94 - GTEMIVTKTGRRMFPGYRIKISGLD BRC2_HALRO 157 157 - GTEMIITKSGRRMFPTVRVSFSGPL H15_DROME 178 178 - GTEMIITKKGRRMFPLVKLKLSGLD Q23467 410 410 - KNEMIVTKSGRKMFPKLEYVVRGLT TBX8_CAEEL 137 137 - VNEMIVTKNGRKLFPKLEYIVEGLD TBX9_CAEEL 108 108 - DNEMVITVNGRRIFPTLEYTVTGLD YPX4_CAEEL 24 24 - Motif 2 width=14 Element Seqn Id St Int Rpt YIHPDSPNFGAHWM BRAC_MOUSE 124 40 - YIHPDSPNFGAHWM O15178 124 40 - YIHPDSPNFGAHWM BRAC_XENLA 122 40 - YVHPDSPATGAHWM O73719 153 40 - YVHPDSPATGAHWM O43891 136 40 - YVHPDSPATGAHWM O15301 136 40 - YIHPDSPNFGAHWM O57386 126 40 - YIHPDSPNFGAHWM BRAC_CHICK 122 40 - YIHPDSPATGEQWM TBX2_HUMAN 177 40 - YIHPDSPATGEQWM TBX2_MOUSE 177 40 - YIHPDSPNFGAHWM BRA2_BRAFL 117 40 - YIHPDSPNFGAHWM BRA1_BRAFL 127 40 - YIHPDSPATGEQWM O73718 187 40 - YVHPDSPATGAHWM TBX5_HUMAN 133 40 - YVHPDSPATGAHWM O93288 139 40 - YIHPDSPNFGAHWM O42100 117 40 - YIHPDSPNFGAHWM BRAC_BRARE 117 40 - YIHPDSPNFGAHWM TBXT_CHICK 121 40 - YMHPDSPNTGAHWM TBR1_MOUSE 287 41 - YMHPDSPNTGAHWM TBR1_HUMAN 287 41 - YIHPDSPTTGEQWM OMB_DROME 410 40 - YLHPDSPAPGSHWM O93303 113 40 - YLHPDSPAPGSHWM O93389 113 40 - YIHPDSPATGAHWM TBX6_MOUSE 173 40 - HYHPDSPAKGAQWM O43436 194 42 - HYHPDSPAKGAQWM O43435 194 42 - YIHPDSPSTGEHWM TBX2_CAEEL 143 40 - FIHPDSPAPGQKWM TBX6_BRARE 116 40 - YVHPESPNTGAHWM EOMD_XENLA 337 41 - HVHPDSPAVGSNWM O62535 280 42 - YVHPDSPNFGSHWM BRAC_HALRO 97 40 - YVHPESPNFGAHWM BYN_DROME 169 40 - YVHPDSPASGAHWM O13161 130 40 - YIHPDSLASGDTWM O70306 197 42 - YIHPDSLASGDTWM O54840 154 42 - YIHPDSPNFGAHWM BRAC_HEMPU 123 40 - FVHTDSPARGAHWM O17212 115 42 - YVHPDSPAPGAHWM VEGT_XENLA 130 40 - YLHPDSPFTGDQLL TX12_CAEEL 161 42 - YLHPDSPFTGDQLL O17276 161 42 - FLHPNSPANGSKWM BRC2_HALRO 222 40 - YAHPDCPLSPEALR H15_DROME 249 46 - FVHPQSPRSGEWWM Q23467 475 40 - LWHADGVRSGKEWM TBX8_CAEEL 202 40 - MWHADGVRKGSDWM TBX9_CAEEL 173 40 - VWHHNGSQTGKDWM YPX4_CAEEL 89 40 - Motif 3 width=10 Element Seqn Id St Int Rpt VSFSKVKLTN BRAC_MOUSE 141 3 - VSFSKVKLTN O15178 141 3 - VSFSKVKLTN BRAC_XENLA 139 3 - VSFQKLKLTN O73719 170 3 - VSFQKLKLTN O43891 153 3 - VSFQKLKLTN O15301 153 3 - VSFSKVKLTN O57386 143 3 - VSFSKVKLTN BRAC_CHICK 139 3 - VAFHKLKLTN TBX2_HUMAN 194 3 - VAFHKLKLTN TBX2_MOUSE 194 3 - VSFSKVKLTN BRA2_BRAFL 134 3 - VSFSKVKLTN BRA1_BRAFL 144 3 - VTFHKLKLTN O73718 204 3 - VSFQKLKLTN TBX5_HUMAN 150 3 - VSFQKLKLTN O93288 156 3 - VSFSKVKLSN O42100 134 3 - VSFSKVKLSN BRAC_BRARE 134 3 - ISFSKVKLTN TBXT_CHICK 138 3 - ISFGKLKLTN TBR1_MOUSE 304 3 - ISFGKLKLTN TBR1_HUMAN 304 3 - VSFHKLKLTN OMB_DROME 427 3 - VSFLKLKLTN O93303 130 3 - VSFLKLKLTN O93389 130 3 - VSFHRVKLTN TBX6_MOUSE 190 3 - VSFDKLKLTN O43436 211 3 - VSFDKLKLTN O43435 211 3 - ANFHKLKLTN TBX2_CAEEL 160 3 - ISFHKLKLTN TBX6_BRARE 133 3 - ISFGKLKLTN EOMD_XENLA 354 3 - VSFDKLKLTN O62535 297 3 - VSFNKVKLTN BRAC_HALRO 114 3 - ISFAKVKLTN BYN_DROME 186 3 - ICFQKLKLTN O13161 147 3 - VSFDKLKLTN O70306 214 3 - VSFDKLKLTN O54840 171 3 - VNFSKVKLSN BRAC_HEMPU 140 3 - VSFDKMKLTN O17212 132 3 - ICFQKLKLTN VEGT_XENLA 147 3 - ISFEKTKLTN TX12_CAEEL 178 3 - ISFEKTKLTN O17276 178 3 - ISFHKVKLTN BRC2_HALRO 239 3 - VSFEKVKLTN H15_DROME 266 3 - VDFKMAKLSN Q23467 492 3 - VCFDRVKITN TBX8_CAEEL 219 3 - ICFDRVKISN TBX9_CAEEL 190 3 - VSFDQIRITN YPX4_CAEEL 106 3 - Motif 4 width=15 Element Seqn Id St Int Rpt MLNSLHKYEPRIHIV BRAC_MOUSE 159 8 - MLNSLHKYEPRIHIV O15178 159 8 - MLNSLHKYEPRIHIV BRAC_XENLA 157 8 - ILNSMHKYQPRLHIV O73719 189 9 - ILNSMHKYQPRLHIV O43891 172 9 - ILNSMHKYQPRLHIV O15301 172 9 - MLNSLHKYEPRIHIV O57386 161 8 - MLNSLHKYEPRIHIV BRAC_CHICK 157 8 - ILNSMHKYQPRFHIV TBX2_HUMAN 213 9 - ILNSMHKYQPRFHIV TBX2_MOUSE 213 9 - MLNSLHKYEPRIHIV BRA2_BRAFL 153 9 - MLNSLHKYEPRLHII BRA1_BRAFL 162 8 - ILNSMHKYQPRFHIV O73718 223 9 - ILNSMHKYQPRLHIV TBX5_HUMAN 169 9 - ILNSMHKYQPRLHIV O93288 175 9 - MLNSLHKYEPRIHIV O42100 152 8 - MLNSLHKYEPRIHIV BRAC_BRARE 152 8 - MLNSLHKYEPQVHIV TBXT_CHICK 156 8 - VLQSLHKYQPRLHVV TBR1_MOUSE 326 12 - VLQSLHKYQPRLHVV TBR1_HUMAN 326 12 - ILNSMHKYQPRFHLV OMB_DROME 449 12 - ILHSMHRYHPRFHIV O93303 149 9 - ILHSMHRYHPRFHIV O93389 149 9 - ILHSMHKYQPRIHLV TBX6_MOUSE 209 9 - ILNSMHRYQPRFHVV O43436 230 9 - ILNSMHRYQPRFHVV O43435 230 9 - ILNSMHKYQPRLHVV TBX2_CAEEL 179 9 - VLHSMHKYQPRLHIV TBX6_BRARE 152 9 - VLQSLHKYQPRLHIV EOMD_XENLA 376 12 - ILNSMHRYQPRFHLV O62535 316 9 - MLNSLHKYEPRIHVV BRAC_HALRO 133 9 - MLNSLHKYEPRVHLV BYN_DROME 204 8 - ILHSMHRYKPRFHVV O13161 166 9 - ILHSMHKYQPRVHVI O70306 233 9 - ILHSMHKYQPRVHVI O54840 190 9 - MLNSLHKYEPRIHII BRAC_HEMPU 158 8 - IVNSMHKYRPRVHII O17212 151 9 - ILHSMHRYKPRFHVV VEGT_XENLA 166 9 - ILNSMHKYQPRIHIV TX12_CAEEL 197 9 - ILNSMHKYQPRIHIV O17276 197 9 - VLNSMHRYQPRVHIV BRC2_HALRO 259 10 - VLNSMHRYQPRIHLV H15_DROME 285 9 - VLNSMHRYNPRFHIV Q23467 511 9 - FLHSMHKYTPVMSIY TBX8_CAEEL 239 10 - YLNSMHKYIPVLTIY TBX9_CAEEL 210 10 - HLLTQHRYIPVLTIY YPX4_CAEEL 128 12 - Motif 5 width=14 Element Seqn Id St Int Rpt TQFIAVTAYQNEEI BRAC_MOUSE 190 16 - TQFIAVTAYQNEEI O15178 190 16 - TQFIAVTAYQNEEI BRAC_XENLA 188 16 - TAFIAVTSYQNHKI O73719 226 22 - TAFIAVTSYQNHKI O43891 209 22 - TAFIAVTSYQNHKI O15301 209 22 - TQFIAVTAYQNEEI O57386 192 16 - TQFTAVTAYQNEEI BRAC_CHICK 188 16 - TDFIAVTAYQNDKI TBX2_HUMAN 248 20 - TDFIAVTAYQNDKI TBX2_MOUSE 248 20 - TQFIAVTAYQNEEL BRA2_BRAFL 186 18 - TQFIAVTAYQNEEI BRA1_BRAFL 195 18 - TEFIAVTAYQNDKI O73718 258 20 - TAFIAVTSYQNHKI TBX5_HUMAN 206 22 - TSFISVTSYQNHKI O93288 212 22 - TQFIAVTAYQNEEI O42100 183 16 - TQFIAVTAYQNEEI BRAC_BRARE 183 16 - TQFIAVTAYQNEEI TBXT_CHICK 187 16 - TQFIAVTAYQNTDI TBR1_MOUSE 364 23 - TQFIAVTAYQNTDI TBR1_HUMAN 364 23 - TEFIAVTAYQNEKI OMB_DROME 484 20 - TSFTAVTAYQNTKI O93303 184 20 - TSFTAVTAYQNTKI O93389 184 20 - TTFISVTAYQNPRI TBX6_MOUSE 244 20 - TRFTAVTAYQNHRI O43436 268 23 - TRFTAVTAYQNHRI O43435 268 23 - TEFIAVTAYQNEKV TBX2_CAEEL 214 20 - AAFIAVTAYQNQEI TBX6_BRARE 188 21 - NQFIAVTAYQNTDI EOMD_XENLA 414 23 - TSFTAVTAYQNQRV O62535 356 25 - SQFIAVTAYQNEEV BRAC_HALRO 167 19 - TQFIAVTAYQNEEV BYN_DROME 235 16 - TEFTAVTAYQNEKI O13161 201 20 - TVFTTVTAYQNQQI O70306 275 27 - TVFTTVTAYQNQQI O54840 232 27 - TRFIAVTAYQNEDI BRAC_HEMPU 191 18 - TEFIAVTAYQNHRI O17212 181 15 - TEFTSVTAYQNEKI VEGT_XENLA 201 20 - TQFMAVTAYQNQLI TX12_CAEEL 239 27 - TQFMAVTAYQNQLI O17276 239 27 - TVFITVTAYQNSEV BRC2_HALRO 294 20 - TVFTAVTAYQNQLI H15_DROME 327 27 - TEFIAVTAYQNDVV Q23467 546 20 - TEFIAVTAYQNDAV TBX8_CAEEL 279 25 - TEFIAVTAYQNQKI TBX9_CAEEL 250 25 - SQFISVTAYHKGEL YPX4_CAEEL 156 13 - Motif 6 width=9 Element Seqn Id St Int Rpt NPFAKAFLD BRAC_MOUSE 211 7 - NPFAKAFLD O15178 211 7 - NPFAKAFLD BRAC_XENLA 209 7 - NPFAKGFRG O73719 247 7 - NPFAKGFRG O43891 230 7 - NPFAKGFRG O15301 230 7 - NPFAKAFLD O57386 213 7 - NPFAKAFLD BRAC_CHICK 209 7 - NPFAKGFRD TBX2_HUMAN 269 7 - NPFAKGFRD TBX2_MOUSE 269 7 - NPFAKAFLD BRA2_BRAFL 207 7 - NPFAKAFLD BRA1_BRAFL 216 7 - NPFAKGFRD O73718 279 7 - NPFAKGFRG TBX5_HUMAN 227 7 - NPFAKGFRG O93288 233 7 - NPFAKAFLD O42100 204 7 - NPFAKAFLD BRAC_BRARE 204 7 - NPFAKAFLD TBXT_CHICK 208 7 - NPFAKGFRD TBR1_MOUSE 385 7 - NPFAKGFRD TBR1_HUMAN 385 7 - NPFAKGLRD OMB_DROME 505 7 - NPFAKGFRD O93303 205 7 - NPFAKGFRD O93389 205 7 - NPFAKGFRE TBX6_MOUSE 265 7 - NPFAKGFRD O43436 289 7 - NPFAKGFRD O43435 289 7 - NPFAKGFRD TBX2_CAEEL 235 7 - NPFAKGFRD TBX6_BRARE 209 7 - NPFAKGFRD EOMD_XENLA 435 7 - NPFAKGFRD O62535 377 7 - NPFAKAFLD BRAC_HALRO 188 7 - NPFAKAFLD BYN_DROME 256 7 - NPFAKGFRE O13161 222 7 - NPFAKGFRD O70306 296 7 - NPFAKGFRD O54840 253 7 - NPFAKAFLD BRAC_HEMPU 212 7 - NPFAKGFRE O17212 202 7 - NPFAKGFRE VEGT_XENLA 222 7 - NPFAKGFRD TX12_CAEEL 260 7 - NPFAKGFRD O17276 260 7 - NPFAKGFRE BRC2_HALRO 315 7 - NPFAKGFRD H15_DROME 348 7 - NPFAKGFRN Q23467 567 7 - NPFAKGFRE TBX8_CAEEL 300 7 - NSFAKGFRD TBX9_CAEEL 271 7 - NPYSTGSRK YPX4_CAEEL 177 7 -
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