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PR00865

Identifier
HPVCAPSIDL1  [View Relations]  [View Alignment]  
Accession
PR00865
No. of Motifs
11
Creation Date
17-FEB-1998  (UPDATE 07-JUN-1999)
Title
Papillomavirus major capsid protein L1 signature
Database References

PFAM; PF00500 late_protein_L1
INTERPRO; IPR002210
PDB; 2BOP
SCOP; 2BOP
CATH; 2BOP
Literature References
1. SAPP, M., VOLPERS, C., MULLER, M. AND STREECK, R.E.
Organization of the major and minor capsid proteins in human papillomavirus
type 33 virus-like particles.
J.GEN.VIROL. 76 2407-2412 (1995).

Documentation
Papillomaviruses are members of the papovavirus superfamily. More than
70 different types of papillomavirus have been discovered in humans, some
of which have been shown to cause genital carcinomas and cutaneous
warts. The viruses contain a circular dsDNA genome surrounded by an 
icosahedral capsid. Two proteins are involved in capsid formation: a major
(L1) and  minor (L2) protein, in the approximate proportion 95:5%.
Experiments have indicated that intermolecular disulphide bonding is 
responsible for cohesion of the L1 capsid proteins [1].
 
HPVCAPSIDL1 is an 11-element fingerprint that provides a signature for
the major L1 protein in the papillomavirus capsid. The fingerprint was
derived from an initial alignment of 18 sequences: the motifs were drawn
from conserved regions spanning virtually the full alignment length. Two
iterations on OWL29.6 were required to reach convergence, at which point a
true set comprising 106 sequence was identified. Several partial matches
were also found, all of which are fragments that lack one or more motifs:
AF001600 fails to match motif 11; those with 5 motifs match motifs 4-8; two
distinct groups of fragment match three motifs, namely 3-5 and 6-8; and
almost all with 2 motifs match motifs 9 and 10. 
 
An update on SPTR37_9f identified a true set of 100 sequences.
Summary Information
100 codes involving 11 elements
0 codes involving 10 elements
0 codes involving 9 elements
0 codes involving 8 elements
0 codes involving 7 elements
0 codes involving 6 elements
0 codes involving 5 elements
0 codes involving 4 elements
0 codes involving 3 elements
0 codes involving 2 elements
Composite Feature Index
11100100100100100100100100100100100
1000000000000
900000000000
800000000000
700000000000
600000000000
500000000000
400000000000
300000000000
200000000000
1234567891011
True Positives
O00530        O12670        O37391        O56939        
O56945 O56951 O56958 O57126
O90730 O91953 O92282 P88804
P89030 P89031 P89427 Q81015
Q81017 Q81958 Q81961 Q81971
Q82003 Q82004 Q82010 Q84359
Q96640 Q98003 VL1_BPV1 VL1_BPV2
VL1_BPV4 VL1_COPV VL1_CRPVK VL1_HPV03
VL1_HPV04 VL1_HPV05 VL1_HPV07 VL1_HPV08
VL1_HPV09 VL1_HPV10 VL1_HPV11 VL1_HPV12
VL1_HPV13 VL1_HPV14 VL1_HPV15 VL1_HPV16
VL1_HPV17 VL1_HPV18 VL1_HPV19 VL1_HPV1A
VL1_HPV20 VL1_HPV21 VL1_HPV22 VL1_HPV23
VL1_HPV24 VL1_HPV25 VL1_HPV26 VL1_HPV27
VL1_HPV28 VL1_HPV29 VL1_HPV2A VL1_HPV30
VL1_HPV31 VL1_HPV32 VL1_HPV33 VL1_HPV34
VL1_HPV35 VL1_HPV36 VL1_HPV37 VL1_HPV38
VL1_HPV39 VL1_HPV40 VL1_HPV41 VL1_HPV42
VL1_HPV44 VL1_HPV45 VL1_HPV47 VL1_HPV48
VL1_HPV49 VL1_HPV50 VL1_HPV51 VL1_HPV52
VL1_HPV53 VL1_HPV54 VL1_HPV55 VL1_HPV56
VL1_HPV57 VL1_HPV58 VL1_HPV5B VL1_HPV60
VL1_HPV61 VL1_HPV63 VL1_HPV65 VL1_HPV66
VL1_HPV68 VL1_HPV6A VL1_HPV70 VL1_HPVME
VL1_PAPVD VL1_PAPVE VL1_PCPV1 VL1_RHPV1
Sequence Titles
O00530      CAPSID PROTEIN - HUMAN PAPILLOMAVIRUS TYPE 16. 
O12670 MAJOR CAPSID PROTEIN - COLOBUS MONKEY PAPILLOMAVIRUS TYPE 2.
O37391 COMPLETE GENOME - COMMON CHIMPANZEE PAPILLOMAVIRUS 1.
O56939 E6, E7, E1, E2, E4, L2, AND L1 GENES - HUMAN PAPILLOMAVIRUS TYPE 75.
O56945 E6, E7, E1, E2, E4, L2, AND L1 GENES - HUMAN PAPILLOMAVIRUS TYPE 76.
O56951 E6, E7, E1, E2, E4, L2, AND L1 GENES - HUMAN PAPILLOMAVIRUS TYPE 77.
O56958 E6, E7, E1, E2, E4, L2, AND L1 GENES - HUMAN PAPILLOMAVIRUS TYPE 80.
O57126 L1 PROTEIN - PAPILLOMAVIRUS SYLVILAGI.
O90730 ORF L1 - HUMAN PAPILLOMAVIRUS TYPE 67.
O91953 LATE MAJOR CAPSID PROTEIN - HUMAN PAPILLOMAVIRUS.
O92282 LATE MAJOR CAPSID PROTEIN - HUMAN PAPILLOMAVIRUS TYPE 16.
P88804 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS.
P89030 MAJOR CAPSID PROTEIN - OVINE PAPILLOMAVIRUS 1.
P89031 MAJOR CAPSID PROTEIN - OVINE PAPILLOMAVIRUS 2.
P89427 PUTATIVE L1 PROTEIN - HUMAN PAPILLOMAVIRUS.
Q81015 L1 CAPSID PROTEIN - HUMAN PAPILLOMAVIRUS TYPE 16.
Q81017 L1 CAPSID PROTEIN - HUMAN PAPILLOMAVIRUS TYPE 31.
Q81958 LATE PROTEIN - HUMAN PAPILLOMAVIRUS TYPE 10.
Q81961 LATE PROTEIN - HUMAN PAPILLOMAVIRUS TYPE 3.
Q81971 ORF PUTATIVE L1 - HUMAN PAPILLOMAVIRUS TYPE 5.
Q82003 1ST ATG - HUMAN PAPILLOMAVIRUS TYPE 7.
Q82004 2ND ATG - HUMAN PAPILLOMAVIRUS TYPE 7.
Q82010 E6, E7, E1, E2, E4, L2, AND L1 GENES - HUMAN PAPILLOMAVIRUS TYPE 7.
Q84359 L1 PROTEIN - MASTOMYS NATALENSIS PAPILLOMAVIRUS (MNPV).
Q96640 STRUCTURAL PROTEIN L1 - BOVINE PAPILLOMAVIRUS.
Q98003 L1 PROTEIN - HUMAN PAPILLOMAVIRUS TYPE 7.
VL1_BPV1 MAJOR CAPSID PROTEIN L1 - BOVINE PAPILLOMAVIRUS TYPE 1.
VL1_BPV2 MAJOR CAPSID PROTEIN L1 - BOVINE PAPILLOMAVIRUS TYPE 2.
VL1_BPV4 MAJOR CAPSID PROTEIN L1 - BOVINE PAPILLOMAVIRUS TYPE 4.
VL1_COPV MAJOR CAPSID PROTEIN L1 - CANINE ORAL PAPILLOMAVIRUS (COPV).
VL1_CRPVK MAJOR CAPSID PROTEIN L1 - COTTONTAIL RABBIT (SHOPE) PAPILLOMAVIRUS (STRAIN KANSAS) (CRPV).
VL1_HPV03 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 3.
VL1_HPV04 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 4.
VL1_HPV05 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 5.
VL1_HPV07 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 7.
VL1_HPV08 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 8.
VL1_HPV09 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 9.
VL1_HPV10 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 10.
VL1_HPV11 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 11.
VL1_HPV12 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 12.
VL1_HPV13 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 13.
VL1_HPV14 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 14.
VL1_HPV15 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 15.
VL1_HPV16 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 16.
VL1_HPV17 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 17.
VL1_HPV18 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 18.
VL1_HPV19 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 19.
VL1_HPV1A MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 1A.
VL1_HPV20 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 20.
VL1_HPV21 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 21.
VL1_HPV22 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 22.
VL1_HPV23 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 23.
VL1_HPV24 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 24.
VL1_HPV25 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 25.
VL1_HPV26 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 26.
VL1_HPV27 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 27.
VL1_HPV28 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 28.
VL1_HPV29 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 29.
VL1_HPV2A MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 2A.
VL1_HPV30 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 30.
VL1_HPV31 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 31.
VL1_HPV32 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 32.
VL1_HPV33 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 33.
VL1_HPV34 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 34.
VL1_HPV35 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 35.
VL1_HPV36 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 36.
VL1_HPV37 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 37.
VL1_HPV38 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 38.
VL1_HPV39 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 39.
VL1_HPV40 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 40.
VL1_HPV41 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 41.
VL1_HPV42 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 42.
VL1_HPV44 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 44.
VL1_HPV45 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 45.
VL1_HPV47 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 47.
VL1_HPV48 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 48.
VL1_HPV49 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 49.
VL1_HPV50 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 50.
VL1_HPV51 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 51.
VL1_HPV52 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 52.
VL1_HPV53 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 53.
VL1_HPV54 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 54.
VL1_HPV55 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 55.
VL1_HPV56 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 56.
VL1_HPV57 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 57.
VL1_HPV58 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 58.
VL1_HPV5B MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 5B.
VL1_HPV60 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 60.
VL1_HPV61 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 61.
VL1_HPV63 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 63.
VL1_HPV65 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 65.
VL1_HPV66 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 66.
VL1_HPV68 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 68.
VL1_HPV6A MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 6A, AND HUMAN PAPILLOMAVIRUS TYPE 6B.
VL1_HPV70 MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE 70.
VL1_HPVME MAJOR CAPSID PROTEIN L1 - HUMAN PAPILLOMAVIRUS TYPE ME180.
VL1_PAPVD MAJOR CAPSID PROTEIN L1 - DEER PAPILLOMAVIRUS.
VL1_PAPVE MAJOR CAPSID PROTEIN L1 - EUROPEAN ELK PAPILLOMAVIRUS (EEPV).
VL1_PCPV1 MAJOR CAPSID PROTEIN L1 - PYGMY CHIMPANZEE PAPILLOMAVIRUS TYPE 1.
VL1_RHPV1 MAJOR CAPSID PROTEIN L1 - RHESUS PAPILLOMAVIRUS TYPE 1 (RHPV 1).
Scan History
OWL29_6    2  200  NSINGLE    
SPTR37_9f 2 101 NSINGLE
Initial Motifs
Motif 1  width=21
Element Seqn Id St Int Rpt
PVQRILSTDEFTTRTDIYYYA MRU018345 48 48 -
PSTKVLSTDEYVSRTNIFYHA PAVCGS6 17 17 -
SVSKVVSTDEYVTRTNIYYYA HPVT73ELG5 15 15 -
PVSKVISTDAYVTRTNIFYHA HPU40822 42 42 -
SVSKVVSTDEYVTRTNIYYHA PPH35CG7 17 17 -
PVSKVVSTDEYVARTNIYYHA HPU372171 17 17 -
SVSKVVSTDEYVTRTNIYYHA VL1_HPV35 17 17 -
PVSKVVSTDEYVSRTSIYYYA VL1_HPV52 43 43 -
PVSKVITTDAYVTRTNIFYHA VL1_HPV13 16 16 -
PVTKIPSTDEYVTRTNVFYYA VL1_CRPVK 17 17 -
PVSKVVPTDAYVKRTNIFYHA VL1_HPV30 24 24 -
PVSKVLSTDDYVTRTNIYYYA VL1_HPV03 45 45 -
PVSKVLSTDDYVTRTNIYYYA VL1_HPV28 17 17 -
PVSKVVSTDEYVARTNIYYHA VL1_HPV16 43 43 -
PITKILSSDDYVSRTNIFYHA VL1_HPV63 17 17 -
PVARVLETDEYITGTSLYFHA VL1_HPV65 18 18 -
PVARVLETDEYITGTSLYFHA VL1_HPV04 18 18 -
PVSKVVSTDEYVARTNIYYHA HPU34193 8 8 -

Motif 2 width=23
Element Seqn Id St Int Rpt
VPKVSGLQYRVFRVKLPDPNKFG PPH35CG7 62 24 -
VPKVSGLQYRVFRIYLPDPNKFG HPU372171 62 24 -
VPKVSGYQFRVFKVVLPDPNKFA HPU40822 85 22 -
VPKVSGLQYRVFRLRLPDPNKFG HPVT73ELG5 60 24 -
VPKVSPNQYRVFRLLLPDPNNFA PAVCGS6 63 25 -
VPKVSPNQYRVFRCKLPDPNRFA MRU018345 91 22 -
VPKVSGLQYRVFRIHLPDPNKFG HPU34193 53 24 -
VPKVSGSQFRVFRFNLPDPNRFA VL1_HPV04 64 25 -
VPKVSGSQYRVFRFYLPDPNRFA VL1_HPV65 64 25 -
VPKVSPNQYRVFRVRFPDPNRFA VL1_HPV63 62 24 -
VPKVSPNQYRVFRIKLPDPNKFA VL1_CRPVK 60 22 -
VPKVSGYQFRVFKVVLPDPNKFA VL1_HPV13 59 22 -
VPKVSAFQYRVFRVRLPDPNKFG VL1_HPV30 69 24 -
IPKVSAFQYRVFRVRLPDPNKFG VL1_HPV03 90 24 -
VPKVSAFQYRVFRVRLPDPNKFG VL1_HPV28 62 24 -
VPKVSGLQYRVFRIKLPDPNKFG VL1_HPV52 91 27 -
VPKVSGLQYRVFRVKLPDPNKFG VL1_HPV35 62 24 -
VPKVSGLQYRVFRIHLPDPNKFG VL1_HPV16 88 24 -

Motif 3 width=26
Element Seqn Id St Int Rpt
RLVWACTGLEVGRGQPLGIGISGHPL HPU40822 120 12 -
RLVWKLRGIEIGRGGPLGIGTTGHPL VL1_HPV04 99 12 -
RLVWRLRGIEIGRGGPLGIGTTGHPL VL1_HPV65 99 12 -
RLVWGLRGIEIGRGQPLGVGISGNPL VL1_HPV63 97 12 -
RLVWCLRGIEVNRGQPLGVSVTGNPI VL1_CRPVK 95 12 -
RLVWACTGLEVGRGQPLGVGISGHPL VL1_HPV13 94 12 -
RLVWACVGLEIGRGQPLGVGVSGNPL VL1_HPV30 104 12 -
RLVWACTGVEVGRGLPLGVGLSGHPL VL1_HPV03 125 12 -
RLVWACTGVEVGRGQPLGVGLSGHPL VL1_HPV28 97 12 -
RLVWACTGLEIGRGQPLGVGISGHPL VL1_HPV52 126 12 -
RLVWACTGVEVGRGQPLGVGISGHPL VL1_HPV35 97 12 -
RLVWACVGVEVGRGQPLGVGISGHPL VL1_HPV16 123 12 -
RLVWACVGVEVGRGQPLGVGISGHPL HPU372171 97 12 -
RLVWACVGVEVGRGQPLGVGISGHPL HPU34193 88 12 -
RLAWCIRGVEIARGQPLGIGITGHPL MRU018345 126 12 -
RLVWGLRGLEIGRGQPLGISVTGHPT PAVCGS6 98 12 -
RLVWACSGVEVGRGQPLGIGTSGNPF HPVT73ELG5 95 12 -
RLVWACTGVEVGRGQPLGVGISGHPL PPH35CG7 97 12 -

Motif 4 width=18
Element Seqn Id St Int Rpt
KQTQMFMIGCKPALGEHW PAVCGS6 155 31 -
KQTQMFIIGCTPAIGEHW VL1_HPV65 153 28 -
KQTQMFLIGCTPATGEHW VL1_HPV63 153 30 -
KQVQLLMLGCVPATGEHW VL1_CRPVK 152 31 -
KQTQLCLVGCAPPLGEHW VL1_HPV13 149 29 -
KQTQLCIIGCTPAIGEHW VL1_HPV30 159 29 -
KQTQLCIVGCTPPMGEHW VL1_HPV03 180 29 -
KQTQLCIVGCTPPMGEHW VL1_HPV28 152 29 -
KQTQLCILGCKPPIGEHW VL1_HPV52 181 29 -
KQTQLCLIGCRPPIGEHW VL1_HPV35 152 29 -
KQTQLCLIGCKPPIGEHW VL1_HPV16 178 29 -
KQTQMFIVGCVPAQGEHW MRU018345 181 29 -
KQTQLCLIGCRPPIGEHW PPH35CG7 155 32 -
KQTQLCLIGCKPPIGEHW HPU372171 152 29 -
KQTQLCLIGCKPPIGEHW HPU34193 143 29 -
KQTQMFIIGCTPAIGEHW VL1_HPV04 153 28 -
KQTQLCMVGCAPPLGEHW HPU40822 175 29 -
KQTQLCILGCRPPLGEHW HPVT73ELG5 150 29 -

Motif 5 width=24
Element Seqn Id St Int Rpt
GDCPPLQLINSVIQDGDMVDTGFG VL1_HPV52 212 13 -
GDCPPLELINTVIQDGDMVDTGFG HPU34193 174 13 -
GDCPPLELINTVIQDGDMVDTGFG HPU372171 183 13 -
GECPPLELLNTVLQDGDMVDTGFG PPH35CG7 186 13 -
GDCPALELITSVIQDGDMVDTGFG HPU40822 206 13 -
GDCPPLELKNTPIQDGDMIDVGFG HPVT73ELG5 181 13 -
GQCPPIELRNTTIEDGDMVDIGFG PAVCGS6 186 13 -
GDCPPIQRMSGMIEDGDMGDIGYG MRU018345 212 13 -
GDCPPLELINTVIQDGDMVHTGFG VL1_HPV16 209 13 -
GECPPLELLNTVLQDGDMVDTGFG VL1_HPV35 183 13 -
GDCPPLELITAPIQDGDMVDTGFG VL1_HPV28 182 12 -
GDCPPLELITAPIQDGDMVDTGYG VL1_HPV03 210 12 -
GDCPPLELVNSPIQDGDMVDIGFG VL1_HPV30 190 13 -
GDCPPLELISSVIQDGDMVDTGFG VL1_HPV13 180 13 -
TDCPPIELVNTVIEDGDMCEIGFG VL1_CRPVK 183 13 -
GDCPPIELVNTVIEDGDMFDIGLG VL1_HPV63 184 13 -
GDCPPIELVNTYIEDGDMCDIGFG VL1_HPV65 184 13 -
GDCPPIELVNSYIQDGDMCDIGFG VL1_HPV04 184 13 -

Motif 6 width=21
Element Seqn Id St Int Rpt
KSDVPLDICTSTCKYPDYLQM VL1_HPV13 214 10 -
KSDVPLDISQSTCKYPDYLKM VL1_HPV30 224 10 -
KSDVPLDICQTTCKYPDYLGM VL1_HPV03 244 10 -
KSDVPLDICQSTCKYPDYLGM VL1_HPV28 216 10 -
KSDVPIDICSSVCKYPDYLQM VL1_HPV52 246 10 -
KSDVPLDICSSICKYPDYLKM VL1_HPV35 217 10 -
KSEVPLDICTSICKYPDYIKM VL1_HPV16 243 10 -
KSEVPLEVVDSICKYPDYLGM MRU018345 246 10 -
KSGVPIDIVNSACKYPDYLKM PAVCGS6 220 10 -
KSDVPIDISNTTCKYPDYLGM HPVT73ELG5 215 10 -
KSDVPLDICNTTCKYPDYLQM HPU40822 240 10 -
KSDVPLDICSSICKYPDYLKM PPH35CG7 220 10 -
KSEVPLDICTSICKYPDYIKM HPU372171 217 10 -
KSSAPLDVIATVCKWPDFLKM VL1_HPV04 218 10 -
KSSAPLDVVATMCKWPDFLKM VL1_HPV65 218 10 -
KSEVPLDICTSICKYPDYIKM HPU34193 208 10 -
KADAPLDIAGTVCKYPDYIKM VL1_HPV63 218 10 -
LSEVPLELAQSISKYPDYLKM VL1_CRPVK 217 10 -

Motif 7 width=24
Element Seqn Id St Int Rpt
HGNSCFFYARQARLYSRHFFNRAG MRU018345 271 4 -
YGDRCFFFVRREQLYARHIMSRSG PAVCGS6 245 4 -
YGDSMWFYLRREQMFVRHLFNRAG HPVT73ELG5 240 4 -
YGDRLFFYLRKEQMFARHFFNRAG HPU40822 265 4 -
YGDMLFFYLRREQMFVRHLFNRAG PPH35CG7 245 4 -
YGDSLFFYLRREQMFVRHLFNRAG HPU372171 242 4 -
YGDSLFFYLRREQMFVRHLFNRAG HPU34193 233 4 -
YGDSMFFYLRKEQLFARHFLNRAG VL1_HPV03 269 4 -
YGDSMFFYLRKEQLFARHFFNRAG VL1_HPV28 241 4 -
YGDSLFFFLRREQMFVRHFFNRAG VL1_HPV52 271 4 -
YGDMLFFYLRREQMFVRHLFNRAG VL1_HPV35 242 4 -
YGDSLFFFGRREQLYARHFFVRAG VL1_HPV04 243 4 -
YGDSLFFYGRREQLYARHFFVRAG VL1_HPV65 243 4 -
YGDSLFFYLRREQMFVRHLFNRAG VL1_HPV16 268 4 -
HGNSLFFFARREQMYLRHVFTHAG VL1_HPV63 243 4 -
FGDSMFFYARREQMYARHFFSRAG VL1_CRPVK 242 4 -
YGDRLFFYLRKEQMFARHFFNRAG VL1_HPV13 239 4 -
YGDSMWFYLRREQLFARHYFNRAG VL1_HPV30 249 4 -

Motif 8 width=23
Element Seqn Id St Int Rpt
PTPSGSMVSSDAQLFNKPYWLQK HPVT73ELG5 291 27 -
GTPSGSLVSSDAVLFNRPYWLER MRU018345 324 29 -
STPSGSLVSSEGQLFNRPYWIQR PAVCGS6 295 26 -
NTPSGSLVSSETQLFNKPFWLQR HPU40822 315 26 -
PTPSGSMVTSDAQIFNKPYWLQR PPH35CG7 294 25 -
PTPSGSMVTSDAQIFNKPYWLQR HPU372171 293 27 -
PTPSGSMVTSDAQIFNKPYWLQR HPU34193 284 27 -
PTPSGSMVTSDAQIFNKPYWLQR VL1_HPV16 319 27 -
PTPSGSMVTSDAQIFNKPYWLQR VL1_HPV35 291 25 -
PTPSGSMVTSESQLFNKPYWLQR VL1_HPV52 324 29 -
PTPSGSMISSEAQLFNKPYWLRR VL1_HPV28 293 28 -
PTPSGSMVTSETQLFNKPYWLRR VL1_HPV03 323 30 -
ATPSGSMVTSEAQLFNKPYWLQR VL1_HPV30 300 27 -
NTPSGSLVSSEAQLFNKPYWLQK VL1_HPV13 287 24 -
ITPSGSLVSSDSQVFNRAYWLQK VL1_CRPVK 297 31 -
VAPSGSLVSSDVQIFNRPYWLQR VL1_HPV63 298 31 -
GTPSGSLVSSESQLFNRPYWLNR VL1_HPV65 302 35 -
GTPSGSLVSSESQLFNRPYWLNR VL1_HPV04 302 35 -

Motif 9 width=22
Element Seqn Id St Int Rpt
QGHNNGICWGNQLFVTVVDTTR HPU34193 308 1 -
QGHNNGICWGNQLFVTVVDTTR HPU372171 317 1 -
QGHNNGICWSNQLFVTVVDTTR PPH35CG7 318 1 -
QGHNNGICWGNQLFVTVVDTTR HPU40822 339 1 -
QGQNNGICWHNQLFLTVVDTTR HPVT73ELG5 315 1 -
QGKNNGIAWGNQLFLTVVDNTR PAVCGS6 319 1 -
QGQNNGILWNNDLFVTVLDNTR MRU018345 348 1 -
QGHNNGICWGNQLFVTVVDTTR VL1_HPV16 343 1 -
QGHNNGICWSNQLFVTVVDTTR VL1_HPV35 315 1 -
QGHNNGICWGNQLFVTVVDTTR VL1_HPV52 348 1 -
QGHNNGICWANQLFVTVVDTTR VL1_HPV28 317 1 -
QGHNNGICWANQLFVTVVDTTR VL1_HPV03 347 1 -
QGHNNGICWGNQVFVTVVDTTR VL1_HPV30 324 1 -
QGHNNGICWGNHLFVTVVDTTR VL1_HPV13 311 1 -
QGMNNGVCWDNQIFVTVVDNTR VL1_CRPVK 321 1 -
QGQNNGICWRNELFVTVADNTR VL1_HPV63 322 1 -
QGTNNGICWDNQLFVTLVDNTH VL1_HPV65 326 1 -
QGTNNGICWDNQLFVTLVDNTH VL1_HPV04 326 1 -

Motif 10 width=18
Element Seqn Id St Int Rpt
YTRHVEEFELEFIFQLVK MRU018345 393 23 -
YLRHVEEYEVSIIVQLCK PAVCGS6 367 26 -
YLRHAEEFDLQFVFQLCK HPVT73ELG5 363 26 -
YMRHVEEFDLQFIFQLCS HPU40822 386 25 -
YLRHGEEYDLQFIFQLCK VL1_HPV16 389 24 -
YLRHGEEYDLQFIFQLCK VL1_HPV35 361 24 -
YLRHGEEFDLQFIFQLCK VL1_HPV52 393 23 -
YLRHGEEYDLQFIFQLCK VL1_HPV28 362 23 -
YLRHGEEYDLQFIFQLCK VL1_HPV03 392 23 -
YVRHVEEYELQFVFQLCK VL1_HPV30 369 23 -
YMRHVEEFDLQFIFQLCT VL1_HPV13 358 25 -
YLRHVEEYELQFVLQLCK VL1_CRPVK 369 26 -
YTRHVEEYELSFIVQLCK VL1_HPV63 368 24 -
YLRHIEEFEMEFIFQLCT VL1_HPV65 374 26 -
YLRHIEEFEMEFIFQLCK VL1_HPV04 374 26 -
YLRHGEEYDLQFIFQLCK HPU34193 354 24 -
YLRHGEEYDLQFIFQLCK HPU372171 363 24 -
YLRHGEEYDLQFIFQLCK PPH35CG7 364 24 -

Motif 11 width=24
Element Seqn Id St Int Rpt
FWEVNLKEKFSADLDQFPLGRKFL HPU372171 446 65 -
FWEVNLKEKFSADLDQFPLGRKFL HPU34193 437 65 -
FWEVNLKEKFSADLDQFPLGRKFL VL1_HPV16 472 65 -
FWVVDLSERFSSELSQFSLGRRFL VL1_HPV04 457 65 -
FWGVDLTERFSSELSQFSLGRRFL VL1_HPV65 457 65 -
FWDVDLSERMSEQLDQFPLGRKFL VL1_HPV63 451 65 -
FWEVDLSEKLSDQLDQYPLGRKFL VL1_CRPVK 452 65 -
FWEVNLKEKFSSELDQYPLGRKFL VL1_HPV13 441 65 -
FWDVNLQDSFSADLDQFPLGRKFL VL1_HPV30 452 65 -
FWDVDLKDRFSLDLSQFPLGRKFL VL1_HPV03 475 65 -
FWEVDLKDRFSLDLSQFPLGRKFL VL1_HPV28 445 65 -
FWEVDLKEKFSADLDQFPLGRKFL VL1_HPV52 476 65 -
FWEVDLKEKFSADLDQFPLGRKFL VL1_HPV35 444 65 -
FWNIDLTERLTADLDQFSLGRKFL MRU018345 475 64 -
FWEVDLKDKMTEQLDQTPLGRKFL PAVCGS6 449 64 -
FWDVDLKEKFSAELDQFPLGRKFL HPVT73ELG5 446 65 -
FWEVNLKEKFSSELDQYPLGRKFL HPU40822 469 65 -
FWEVDLKEKFSADLDQFPLGRKFL PPH35CG7 447 65 -
Final Motifs
Motif 1  width=21
Element Seqn Id St Int Rpt
PVSKVVSTDEYVARTNIYYHA O00530 43 43 -
PVSKVVSTDEYVARTNIYYHA O92282 17 17 -
PVSKVVSTDEYVARTNIYYHA Q81015 17 17 -
PVSKVVSTDEYVTRTNIYYHA Q81017 17 17 -
PVSKVVSTDEYVTRTNIYYHA VL1_HPV31 17 17 -
PVSKVVSTDEYVARTNIYYHA VL1_HPV16 43 43 -
PVSKVVSTDEYVSRTSIYYYA O90730 46 46 -
SVSKVVSTDEYVTRTNIYYHA VL1_HPV35 17 17 -
PVSKVVSTDEYVSRTSIYYYA VL1_HPV52 43 43 -
PVSKVLSTDDYVTRTNIYYYA VL1_HPV28 17 17 -
PVSKVVSTDEYVSRTSIYYYA VL1_HPV33 17 17 -
PVSKVVSTDEYVSRTSIYYHA VL1_RHPV1 17 17 -
PVSKVVSTDEYVSRTSIYYYA VL1_HPV58 43 43 -
PVSKVLSTDDYVTRTNIYYYA Q81958 17 17 -
PVSKVLSTDDYVTRTNIYYYA VL1_HPV10 45 45 -
PVSKVISTDDYVTRTNIYYYA VL1_HPV29 17 17 -
PVSKVLSTDDYVTRTNIYYYA Q81961 17 17 -
PVSKVLSTDDYVTRTNIYYYA VL1_HPV03 45 45 -
PVSKVVPTDAYVKRTNIFYHA VL1_HPV30 24 24 -
PVSKVVSTDEYVQRTNYFYHA VL1_HPV42 17 17 -
PVSKVITTDAYVTRTNIFYHA VL1_HPV13 16 16 -
SVAKVVSTDEYVTRTSIFYHA Q81971 17 17 -
PVSKVISTDDYVTRTNVYYYA O56951 79 79 -
PVSKVVATDAYVTRTNIFYHA VL1_HPV6A 16 16 -
PVSKVVSTDEYVTRTSIYYHA VL1_HPV54 15 15 -
PVSKVVATDAYVKRTNIFYHA VL1_HPV11 16 16 -
PVSKVISTDAYVTRTNIFYHA Q98003 42 42 -
PVSKVITTDAYVKRTTIFYHA VL1_HPV53 17 17 -
PVSKVITTDAYVKRTNIVYHA VL1_HPV55 16 16 -
PVARVQSTDEYVQRTNIYYHA VL1_HPV21 18 18 -
PVSKVIPTDAYVKRTNIYYHA VL1_HPV44 16 16 -
SVAKVVNTDDYVTRTGIYYYA VL1_HPV39 17 17 -
PVSKVVSTDEYVQRTNYFYHA VL1_HPV32 17 17 -
PVSKVLSTDRYVQRTNLYYYG Q82003 45 45 -
PVSKVLSTDRYVQRTNLYYYG Q82004 17 17 -
PVARVQSTDEYVQRTNIYYHA VL1_HPV14 18 18 -
PVARVQSTDEYVQRTNIYYHA VL1_HPV25 18 18 -
PVSKVVATDTYVKRTSIFYHA VL1_HPV66 17 17 -
PVSKVVATDSYVKRTSIFYHA VL1_HPV56 52 52 -
SVSKVVSTDEYVTRTNIYYYA Q82010 15 15 -
PVSKVITTDAYVTRTKIFYHA VL1_PCPV1 16 16 -
PVSRVVNTDEYVTRTGIYYYA VL1_HPV26 17 17 -
SVAKVVNTDDYVTRTGIYYYA VL1_HPVME 17 17 -
PVARVQSTDEYVQRTNIYYHA VL1_HPV19 47 47 -
PVARVQSTDEYIERTDIYYHA O56945 19 19 -
PVSKVLSTDVYVTRTNVYYHG P89427 33 33 -
PVSKVLSTDVYVTRTNVYYHG VL1_HPV57 33 33 -
SVARVVSTDDYVSRTSIFYHA VL1_HPV45 43 43 -
SVAKVVNTDDYVTRTGIYYYA VL1_HPV70 17 17 -
PVSKVLTTDAYVTRTKIFYHA O37391 16 16 -
PVARVQSTDEYVERTNIFYHA VL1_HPV17 18 18 -
SVAKVVNTDDYVTRTGMYYYA VL1_HPV68 17 17 -
PVARVQSTDEYIQRTDIYYHA O56939 19 19 -
PVARVQSTDEYIQRTNIYYHA VL1_HPV08 18 18 -
PVSKVISTDRYVQRTNLFYYG VL1_HPV61 17 17 -
PVSKVISTDVYVTRTNVYYHG VL1_HPV2A 33 33 -
PVARVQSTDEYVQRTNIYYHA VL1_HPV20 18 18 -
PVARVQSTDEYIQRTNIYYHA VL1_HPV5B 18 18 -
SVSKVVSTEEYVTRTNIYYYA VL1_HPV34 41 41 -
PVARVQSTDEYVERTDIYYHA VL1_HPV38 18 18 -
PVSKVISTDVYVTRTNVYYHG VL1_HPV27 126 126 -
PVARVQSTDEYIQRTNIYYHA VL1_HPV47 18 18 -
PVAKVQSTDEYIQRTNIFYHA VL1_HPV24 18 18 -
PVARVQSTDEYIQRTNIYYHA VL1_HPV05 18 18 -
SVARVVNTDDYVTPTSIFYHA VL1_HPV18 78 78 -
PVARVQSTDEYIQRTNIYYHA VL1_HPV12 18 18 -
PVARVQSTDEYIQRTQIYYHA O12670 18 18 -
PVATIVSTDEYVQRTSLYYHA VL1_HPV07 16 16 -
PVARVQSTDEYVERTNIFYHA VL1_HPV09 18 18 -
PVARVQSTDEYIQRTNIYYHA VL1_HPV36 18 18 -
PVARVQSTDDYVERTNVFYHA VL1_HPV37 18 18 -
PVATIVSTDEYVQRTSLYYHA VL1_HPV40 16 16 -
PVARVQSTDEYIQRTDIYYHA VL1_HPV49 19 19 -
PVARVQSTDEYVERTNVFYHA O56958 18 18 -
PVARVQSTDEYIQRTNIYYHA P88804 18 18 -
PVARVQSTDEYVERTNVFYHA VL1_HPV15 18 18 -
PVSRIVNTEEYITRTGIYYYA VL1_HPV51 17 17 -
PVARVQNTDEYVERTDIYYHA VL1_HPV22 18 18 -
PVARVQSTDEYVERTDIYYHA VL1_HPV23 18 18 -
PIASIVSTDEYVQRTNLFYHA O91953 16 16 -
PSTKVLSTDEYVSRTNIFYHA VL1_COPV 17 17 -
PVTKIPSTDEYVTRTNVFYYA O57126 19 19 -
PVTKIPSTDEYVTRTNVFYYA VL1_CRPVK 17 17 -
PITKILSSDDYVSRTNIFYHA VL1_HPV63 17 17 -
PVARVLETDEYITGTSLYFHA VL1_HPV65 18 18 -
PVARVLETDEYITGTSLYFHA VL1_HPV04 18 18 -
PITRILSTDEYVTRTNLFYHA VL1_HPV1A 23 23 -
PVARVLSTDEYVKETDVYFHA VL1_HPV50 18 18 -
PVQRILSTDEFTTRTDIYYYA Q84359 48 48 -
PVSKVLCSETYVQRKSIFYHA VL1_BPV1 16 16 -
PVTKVLCSEQYIRRKDVFYHG VL1_PAPVE 16 16 -
PVARVLSTDEYVQPTNLVFHT VL1_HPV60 18 18 -
PVSKVLCSETYVQRKSIFYHA VL1_BPV2 16 16 -
PVSKVLCSETYVQRKSIFYHA Q96640 16 16 -
PVARVLRTDEYVQETDVYFYT VL1_HPV48 18 18 -
PVTQFLDTDEFVTRTDIFYHT VL1_BPV4 18 18 -
PVSKTLCSESYVYRKDIYYHA P89030 16 16 -
PVTKTLCSETYVSRRDIYYHA P89031 16 16 -
PVTKVLCSEQYINVRDIFYHG VL1_PAPVD 16 16 -
PIQRTLNTEEYVRRTSTFLHA VL1_HPV41 38 38 -

Motif 2 width=23
Element Seqn Id St Int Rpt
VPKVSGLQYRVFRIHLPDPNKFG O00530 88 24 -
VPKVSGLQYRVFRIHLPDPNKFG O92282 62 24 -
VPKVSGLQYRVFRIYLPDPNKFG Q81015 62 24 -
VPKVSGLQYRVFRVRLPDPNKFG Q81017 63 25 -
VPKVSGLQYRVFRVRLPDPNKFG VL1_HPV31 63 25 -
VPKVSGLQYRVFRIHLPDPNKFG VL1_HPV16 88 24 -
VPKVSGLQYRVFRVRLPDPNKFG O90730 92 25 -
VPKVSGLQYRVFRVKLPDPNKFG VL1_HPV35 62 24 -
VPKVSGLQYRVFRIKLPDPNKFG VL1_HPV52 91 27 -
VPKVSAFQYRVFRVRLPDPNKFG VL1_HPV28 62 24 -
VPKVSGLQYRVFRVRLPDPNKFG VL1_HPV33 63 25 -
VPKVSGLQYRVFRVRLPDPNKFG VL1_RHPV1 61 23 -
VPKVSGLQYRVFRVRLPDPNKFG VL1_HPV58 89 25 -
VPKVSAFQYRVFRVRLPDPNKFG Q81958 62 24 -
VPKVSAFQYRVFRVRLPDPNKFG VL1_HPV10 90 24 -
VPKVSAFQYRVFRVRLPDPNKFG VL1_HPV29 62 24 -
IPKVSAFQYRVFRVRLPDPNKFG Q81961 62 24 -
IPKVSAFQYRVFRVRLPDPNKFG VL1_HPV03 90 24 -
VPKVSAFQYRVFRVRLPDPNKFG VL1_HPV30 69 24 -
IPKVSGLQYRVFRVRLPDPNKFT VL1_HPV42 61 23 -
VPKVSGYQFRVFKVVLPDPNKFA VL1_HPV13 59 22 -
VPKVSAYQYRVFRVKLPDPNKFG Q81971 62 24 -
VPKVSAFQYRVFRVRLPDPNKFG O56951 124 24 -
VPKVSGYQYRVFKVVLPDPNKFA VL1_HPV6A 59 22 -
IPKVSGYQYRVFRVQLPDPNKFG VL1_HPV54 59 23 -
VPKVSGYQYRVFKVVLPDPNKFA VL1_HPV11 59 22 -
VPKVSGYQFRVFKVVLPDPNKFA Q98003 85 22 -
IPKVSAFQYRVFRVRLPDPNKFG VL1_HPV53 60 22 -
VPKVSGFQYRVFKVVLPDPNKFA VL1_HPV55 59 22 -
VPKVSGNQHRVFRLKLPDPNRFA VL1_HPV21 63 24 -
VPKVSGFQYRVFKMVLPDPNKFA VL1_HPV44 59 22 -
IPKVSAYQYRVFRVTLPDPNKFS VL1_HPV39 62 24 -
IPKVSGLQYRVFRVRLPDPNKFT VL1_HPV32 61 23 -
IPKVSGYQYRVFRVKLPDPNKFA Q82003 91 25 -
IPKVSGYQYRVFRVKLPDPNKFA Q82004 63 25 -
VPKVSGNQHRVFRLKLPDPNRFA VL1_HPV14 63 24 -
IPKVSGNQHRVFRLKLPDPNRFA VL1_HPV25 63 24 -
IPKVSAYQYRVFRVRLPDPNKFG VL1_HPV66 61 23 -
IPKVSAYQYRVFRVRLPDPNKFG VL1_HPV56 96 23 -
VPKVSGLQYRVFRLRLPDPNKFG Q82010 60 24 -
VPKVSGFQFRVFKIVLPDPNKFA VL1_PCPV1 59 22 -
IPKVSAYQYRVFRVHLPDPNKFG VL1_HPV26 61 23 -
IPKVSAYQYRVFRISLPDPNKFS VL1_HPVME 62 24 -
IPKVSGNQHRVFRLKLPDPNRFA VL1_HPV19 92 24 -
VPKVSGNQFRAFRLLLPDPNRFA O56945 65 25 -
VPKVSGYQYRVFHVKLPDPNKFG P89427 78 24 -
VPKVSGYQYRVFHVKLPDPNKFG VL1_HPV57 78 24 -
VPKVSAYQYRVFRVALPDPNKFG VL1_HPV45 89 25 -
IPKVSAYQYRVFRVSLPDPNKFG VL1_HPV70 62 24 -
VPKVSGFQFRVFKIVLPDPNKFA O37391 59 22 -
VPKVSGNQYRAFRVTLPDPNKFA VL1_HPV17 63 24 -
IPKVSAYQYRVFRVTLPDPNKFS VL1_HPV68 62 24 -
VPKVSGNQFRAFRLLLPDPNRFA O56939 65 25 -
VPKVSGNQHRVFRLKLPDPNRFA VL1_HPV08 63 24 -
IPKVSGYQYRVFRVQLPDPNKFA VL1_HPV61 64 26 -
VPKVSGYQYRVFHVKLPDPNKFG VL1_HPV2A 77 23 -
VPKVSGNQHRVFRLKLPDPNRFA VL1_HPV20 63 24 -
VPKVSGNQHRVFRLKLPDPNRFA VL1_HPV5B 63 24 -
VPKVSGLQYRVFRIRLPDPNKFG VL1_HPV34 87 25 -
VPKVSGNQYRSFRVTFPDPNKFA VL1_HPV38 63 24 -
VPKVSGYQYRVFHVKLPDPNKFG VL1_HPV27 171 24 -
VPKVSGNQHRVFRLKLPDPNRFA VL1_HPV47 63 24 -
VPKVSGNQHRVFRLKLPDPNRFA VL1_HPV24 63 24 -
VPKVSGNQHRVFRLKLPDPNRFA VL1_HPV05 63 24 -
IPKVSAYQYRVFRVQLPDPNKFG VL1_HPV18 123 24 -
VPKVSGNQHRVFRLKLPDPNRFA VL1_HPV12 63 24 -
VPKVSGNQHRVFRLRLPDPNRFA O12670 63 24 -
VPKVSGHQYRVFRVRLPDPNKFG VL1_HPV07 60 23 -
VPKVSGNQYRAFRISLPDPNRFA VL1_HPV09 63 24 -
VPKVSGNQHRVFRLKLPDPNRFA VL1_HPV36 63 24 -
VPKVSGNQYRAFRVRLPDPNKFA VL1_HPV37 63 24 -
VPKVSGHQYRVFRVRLPDPNKFG VL1_HPV40 60 23 -
VPKVSGNQYRAFRLLLPDPNRFA VL1_HPV49 65 25 -
VPKVSGNQYRAFRVTFPDPNRFA O56958 63 24 -
VPKVSGNQHRVFRLKLPDPNRFA P88804 63 24 -
VPKVSGNQYRAFRVTFPDPNRFA VL1_HPV15 63 24 -
IPKVSAFQYRVFRVQLPDPNKFG VL1_HPV51 61 23 -
VPKVSGNQFRAFRVTFPDPNKFA VL1_HPV22 63 24 -
VPKVSGNQFRAFRVTFPDPNKFA VL1_HPV23 63 24 -
VPKVSGHQYRVFRVKLPDPNKFG O91953 60 23 -
VPKVSPNQYRVFRLLLPDPNNFA VL1_COPV 63 25 -
VPKVSPNQYRVFRIKLPDPNKFA O57126 62 22 -
VPKVSPNQYRVFRIKLPDPNKFA VL1_CRPVK 60 22 -
VPKVSPNQYRVFRVRFPDPNRFA VL1_HPV63 62 24 -
VPKVSGSQYRVFRFYLPDPNRFA VL1_HPV65 64 25 -
VPKVSGSQFRVFRFNLPDPNRFA VL1_HPV04 64 25 -
IPKVSPNAFRVFRVRFADPNRFA VL1_HPV1A 66 22 -
VPKVSANQYRVFRCELPDPNKFA VL1_HPV50 61 22 -
VPKVSPNQYRVFRCKLPDPNRFA Q84359 91 22 -
VPKVSANQYRVFKIQLPDPNQFA VL1_BPV1 58 21 -
IPKVSPNQYRVFRILLPDPNQFA VL1_PAPVE 60 23 -
VPKCSGNQFRVMRLLFPDPNKFA VL1_HPV60 63 24 -
VPKVSANQFRVFKIQLPDPNQFA VL1_BPV2 58 21 -
VPKVSANQFRVFKIQLPDPNQFA Q96640 58 21 -
VPKVSANQYRVFRCKLPDPNKFA VL1_HPV48 61 22 -
CSQMSGSQFRVFRLKFPDPNKFS VL1_BPV4 61 22 -
VPKVSPNQYRAFMVQLPDPNQFA P89030 58 21 -
VPKVSPNQYRAFMIQLPDPNQFA P89031 58 21 -
VPKVSPNQYRVFRVALPDPNQFA VL1_PAPVD 59 22 -
VPKVSSNQFRAFRVRFPNPNTFA VL1_HPV41 82 23 -

Motif 3 width=26
Element Seqn Id St Int Rpt
RLVWACVGVEVGRGQPLGVGISGHPL O00530 123 12 -
RLVWACVGVEVGRGQPLGVGISGHPL O92282 97 12 -
RLVWACVGVEVGRGQPLGVGISGHPL Q81015 97 12 -
RLVWACVGLEVGRGQPLGVGISGHPL Q81017 98 12 -
RLVWACVGLEVGRGQPLGVGISGHPL VL1_HPV31 98 12 -
RLVWACVGVEVGRGQPLGVGISGHPL VL1_HPV16 123 12 -
RLVWACVGIEIGRGQPLGVGISGHPL O90730 127 12 -
RLVWACTGVEVGRGQPLGVGISGHPL VL1_HPV35 97 12 -
RLVWACTGLEIGRGQPLGVGISGHPL VL1_HPV52 126 12 -
RLVWACTGVEVGRGQPLGVGLSGHPL VL1_HPV28 97 12 -
RLVWACVGLEIGRGQPLGVGISGHPL VL1_HPV33 98 12 -
RLVWACLGVEVGRGQPLGVGTSGHPL VL1_RHPV1 96 12 -
RLVWACVGLEIGRGQPLGVGVSGHPY VL1_HPV58 124 12 -
RLVWACTGVEVGRGQPLGVGLSGHPL Q81958 97 12 -
RLVWACTGVEVGRGQPLGVGLSGHPL VL1_HPV10 125 12 -
RLVWACTGVEVGRGQPLGVGLSGHPL VL1_HPV29 97 12 -
RLVWACTGVEVGRGLPLGVGLSGHPL Q81961 97 12 -
RLVWACTGVEVGRGLPLGVGLSGHPL VL1_HPV03 125 12 -
RLVWACVGLEIGRGQPLGVGVSGNPL VL1_HPV30 104 12 -
RMVWACVGLEVGRGQPLGVGISGHPL VL1_HPV42 96 12 -
RLVWACTGLEVGRGQPLGVGISGHPL VL1_HPV13 94 12 -
RLVWACVGVEIGRGQPLGVGLSGHPL Q81971 97 12 -
RLVWACTGVEVGRGQPLGVGLSGHPL O56951 159 12 -
RLVWACTGLEVGRGQPLGVGVSGHPF VL1_HPV6A 94 12 -
RLVWACTGVEVGRGQPLGLGLSGHPL VL1_HPV54 94 12 -
RLVWACTGLEVGRGQPLGVGVSGHPL VL1_HPV11 94 12 -
RLVWACTGLEVGRGQPLGIGISGHPL Q98003 120 12 -
RLVWACVGLEIGRGQPLGVGVSGHPL VL1_HPV53 95 12 -
RLVWACIGLEVGRGQPLGVGISGHPL VL1_HPV55 94 12 -
RLVWACRGIEIGRGQPLGVGSVGHPL VL1_HPV21 98 12 -
RLVWACIGLEVGRGQPLGVGISGHPL VL1_HPV44 94 12 -
RLVWACVGVEVGRGQPLGVGISGHPL VL1_HPV39 97 12 -
RMVWACVGLEVGRGQPLGVGLSGHPL VL1_HPV32 96 12 -
RLVWACRGIEVGRGQPLGVGTSGHPL Q82003 126 12 -
RLVWACRGIEVGRGQPLGVGTSGHPL Q82004 98 12 -
RLVWACRGIEIGRGQPLGVGSVGHPL VL1_HPV14 98 12 -
RLVWACRGIEIGRGQPLGVGSVGHPL VL1_HPV25 98 12 -
RLVWACVGLEVGRGQPLGAGLSGHPL VL1_HPV66 96 12 -
RLVWACVGLEVGRGQPLGAGLSGHPL VL1_HPV56 131 12 -
RLVWACSGVEVGRGQPLGIGTSGNPF Q82010 95 12 -
RLVWACIGLEVGRGQPLGVGISGHPL VL1_PCPV1 94 12 -
RLVWACVGVEVGRGQPLGIGLSGHPL VL1_HPV26 96 12 -
RLVWACVGVEIGRGQPLGVGLSGHPL VL1_HPVME 97 12 -
RLVWGCRGIEIGRGQPLGVGSVGHPL VL1_HPV19 127 12 -
RLVWACRGLEIGRGQPLGVGSTGHPL O56945 100 12 -
RLLWACVGVEVGRGQPLGVGISGHPY P89427 113 12 -
RLLWACVGVEVGRGQPLGVGISGHPY VL1_HPV57 113 12 -
RLVWACVGMEIGRGQPLGIGLSGHPF VL1_HPV45 124 12 -
RLVWACIGVEIGRGQPLGVGVSGHPL VL1_HPV70 97 12 -
RLVWACIGLEVGRGQPLGVGYCGHPC O37391 94 12 -
RLVWACAGLEIGRGQPLGVGTTGHPL VL1_HPV17 98 12 -
RMVWACVGVEIGRGQPLGVGLSGHPL VL1_HPV68 97 12 -
RLVWACRGLEIGRGQPLGVGSTGHPL O56939 100 12 -
RLVWACRGLEISRGQPLGVGSTGHPY VL1_HPV08 98 12 -
RMVWACRGIEVGRGQPLGVGTSGHPL VL1_HPV61 99 12 -
RLLWACVGVEVGRGQPLGVGVSGHPY VL1_HPV2A 112 12 -
RLVWGCRGIEIGRGQPLGVGSVGHPL VL1_HPV20 98 12 -
RLVWACRGLEIGRGQPLGVGSTGHPY VL1_HPV5B 98 12 -
RLVWACAGVEVGRGQPLGIGTSGNPF VL1_HPV34 122 12 -
RLVWACKGLEIGRGQPLGVGTTGHPL VL1_HPV38 98 12 -
RLLWACVGVEVGRGQPLGVGVSGHPY VL1_HPV27 206 12 -
RLVWACRGLEIGRGQPLGVGSTGHPY VL1_HPV47 98 12 -
RLVWGCRGVEIGRGQPLGVGTSGHPL VL1_HPV24 98 12 -
RLVWACRGLEIGRGQPLGVRSTGHPY VL1_HPV05 98 12 -
RLVWACAGVEIGRGQPLGVGLSGHPF VL1_HPV18 158 12 -
RLVWACRGLEISRGQPLGVGSTGHPY VL1_HPV12 98 12 -
RLVWACRGIEIGRGQPLGVGSTGTPI O12670 98 12 -
RLVWACVGVEVGRGQPLGVGISGHPY VL1_HPV07 95 12 -
RLVWACRGIEIGRGQPLGVGTSGHPL VL1_HPV09 98 12 -
RLVWSCRGLEIGRGQPLGVGSTGHPL VL1_HPV36 98 12 -
RLVWACAGLEIGRGQPLGVGTTGHPL VL1_HPV37 98 12 -
RLVWACVGVEVGRGQPLGVGVSGHPY VL1_HPV40 95 12 -
RLVWACRGLEIGRGQPLGVGTTGHPL VL1_HPV49 100 12 -
RLVWACAGLEIGRGQPLGVGTSGHPL O56958 98 12 -
RLVWGCRGLEISRGQPLGVGSTGHPY P88804 98 12 -
RLVWACVGLEIGRGQPLGVGTSGHPL VL1_HPV15 98 12 -
RLVWGCVGVEVGRGQPLGVGLSGHPL VL1_HPV51 96 12 -
RLVWACKGLEIGRGQPLGVGTTGHPL VL1_HPV22 98 12 -
RLVWACAGLEIGRGQPLGVGSTGHPL VL1_HPV23 98 12 -
RLVWGCVGVEIGRGQPLGVGISGHPY O91953 95 12 -
RLVWGLRGLEIGRGQPLGISVTGHPT VL1_COPV 98 12 -
RLVWCLRGIEVNRGQPLGVSVTGNPI O57126 97 12 -
RLVWCLRGIEVNRGQPLGVSVTGNPI VL1_CRPVK 95 12 -
RLVWGLRGIEIGRGQPLGVGISGNPL VL1_HPV63 97 12 -
RLVWRLRGIEIGRGGPLGIGTTGHPL VL1_HPV65 99 12 -
RLVWKLRGIEIGRGGPLGIGTTGHPL VL1_HPV04 99 12 -
RLVWGLRGIEIGRGQPLGIGITGHPL VL1_HPV1A 101 12 -
RLVWKLVGIEVGRGGPLGVGSTGHPL VL1_HPV50 96 12 -
RLAWCIRGVEIARGQPLGIGITGHPL Q84359 126 12 -
RLVWAVIGVQVSRGQPLGGTVTGHPT VL1_BPV1 93 12 -
RLVWAVVGVQVSRGQPLGGSVSGHSY VL1_PAPVE 95 12 -
RLVWRLEGLEIGRGGPLGIGTSGHPL VL1_HPV60 98 12 -
RLVWAVIGVQVSRGQPLGGTVTGHPT VL1_BPV2 93 12 -
RLVWAVIGVQVSRGQPLGGTVTGHPT Q96640 93 12 -
RLVWKLVGLEVGRGGPLGVGSTGHPL VL1_HPV48 96 12 -
RLVWAVRGIEICRGQPLGVGVTGHPS VL1_BPV4 96 12 -
KLVWGLIGLQVSRGQPLGGAISGHTS P89030 93 12 -
KLVWGLIGLQVSRGQPLGGAISGHTT P89031 93 12 -
RLVWAVVGVQVSRGQPLGGEVRGHSY VL1_PAPVD 94 12 -
RLVWGIRGIEVSRGQPLGIGVTGNPF VL1_HPV41 117 12 -

Motif 4 width=18
Element Seqn Id St Int Rpt
KQTQLCLIGCKPPIGEHW O00530 178 29 -
KQTQLCLIGCKPPIGEHW O92282 152 29 -
KQTQLCLIGCKPPIGEHW Q81015 152 29 -
KQTQLCLLGCKPPIGEHW Q81017 153 29 -
KQTQLCLLGCKPPIGEHW VL1_HPV31 153 29 -
KQTQLCLIGCKPPIGEHW VL1_HPV16 178 29 -
KQTQLCIIGCKPPTGEHW O90730 182 29 -
KQTQLCLIGCRPPIGEHW VL1_HPV35 152 29 -
KQTQLCILGCKPPIGEHW VL1_HPV52 181 29 -
KQTQLCIVGCTPPMGEHW VL1_HPV28 152 29 -
KQTQLCLLGCKPPTGEHW VL1_HPV33 153 29 -
KQTQLCMLGCKPPVGEHW VL1_RHPV1 151 29 -
KQTQLCLIGCKPPTGEHW VL1_HPV58 179 29 -
KQTQLCIIGCTPPMGEHW Q81958 152 29 -
KQTQLCIIGCTPPMGEHW VL1_HPV10 180 29 -
KQTQLCILGCTPPMGEHW VL1_HPV29 152 29 -
KQTQLCIVGCTPPMGEHW Q81961 152 29 -
KQTQLCIVGCTPPMGEHW VL1_HPV03 180 29 -
KQTQLCIIGCTPAIGEHW VL1_HPV30 159 29 -
KQTQLCLVGCKPAIGEHW VL1_HPV42 151 29 -
KQTQLCLVGCAPPLGEHW VL1_HPV13 149 29 -
KQTQLCIIGCVPAIGEHW Q81971 152 29 -
KQTQLCILGCTPPMGEYW O56951 214 29 -
KQTQLCMVGCAPPLGEHW VL1_HPV6A 148 28 -
KQTQLCILGCTPPIGEHW VL1_HPV54 148 28 -
KQTQLCMVGCAPPLGEHW VL1_HPV11 149 29 -
KQTQLCMVGCAPPLGEHW Q98003 175 29 -
KQTQLCIIGCAPAIGEHW VL1_HPV53 150 29 -
KQTQLCLVGCAPPLGEHW VL1_HPV55 149 29 -
KQLQMFIIGCAPCLGEHW VL1_HPV21 154 30 -
KQTQLCLVGCAPPLGEHW VL1_HPV44 149 29 -
KQTQLCIIGCVPAIGEHW VL1_HPV39 151 28 -
KQTQLCLVGCKPAIGEHW VL1_HPV32 151 29 -
KQTQLLIIGCKPPIGEHW Q82003 180 28 -
KQTQLLIIGCKPPIGEHW Q82004 152 28 -
KQLQMFIIGCAPCMGEHW VL1_HPV14 154 30 -
KQLQMFIIGCAPCIGEHW VL1_HPV25 152 28 -
KQTQLCIVGCAPALGEHW VL1_HPV66 151 29 -
KQTQLCIVGCTPAMGEHW VL1_HPV56 186 29 -
KQTQLCILGCRPPLGEHW Q82010 150 29 -
KQTQLCLVGCAPPLGEHW VL1_PCPV1 149 29 -
KQTQLCIIGCTPPLGEHW VL1_HPV26 151 29 -
KQTQLCIIGCVPAIGEHW VL1_HPVME 152 29 -
KQLQMFIIGCAPCIGEHW VL1_HPV19 181 28 -
KQVQMFIIGCAPCIGEHW O56945 154 28 -
KQTQLFILGCKPPIGEHW P89427 166 27 -
KQTQLFILGCKPPIGEHW VL1_HPV57 166 27 -
KQTQLCILGCVPAIGEHW VL1_HPV45 179 29 -
KQTQLCIIGCVPAMGEHW VL1_HPV70 152 29 -
KQTQLCLVGCAPPLGEHW O37391 149 29 -
KQVQMFVVGCVPCIGEHW VL1_HPV17 152 28 -
KQTQLCIIGCVPAIGEHW VL1_HPV68 152 29 -
KQVQMFIIGCAPCIGEHW O56939 154 28 -
KQIQMFIVGCTPCIGEHW VL1_HPV08 152 28 -
KQTQLLIVGCKPPIGEHW VL1_HPV61 153 28 -
KQTQLFILGCKPPIGEHW VL1_HPV2A 165 27 -
KQLQMFIIGCAPCLGEHW VL1_HPV20 152 28 -
KQIQMFIVGCTPCIGEHW VL1_HPV5B 161 37 -
KQTQLCIVGCKPPLGEHW VL1_HPV34 177 29 -
KQVQMFIIGCTPCLGEYW VL1_HPV38 152 28 -
KQTQLFILGCKPSIGEHW VL1_HPV27 259 27 -
KQIQMFIVGCTPCIGEHW VL1_HPV47 152 28 -
KQIQMFIIGCAPCIGEHW VL1_HPV24 154 30 -
KQIQMFIVGCTPCIGEHW VL1_HPV05 152 28 -
KQTQLCILGCAPAIGEHW VL1_HPV18 213 29 -
KQIQMFIVGCTPCVGEHW VL1_HPV12 152 28 -
KQIQMFIIGCAPCIGEHW O12670 154 30 -
KQTQLCIVGCTPPIGEYW VL1_HPV07 150 29 -
KQVQMFIIGCIPCLGEHW VL1_HPV09 152 28 -
KQIQMFIVGCTPCIGEHW VL1_HPV36 152 28 -
KQVQMFVVGCVPCMGEHW VL1_HPV37 152 28 -
KQTQLCMLGCTPPIGEYW VL1_HPV40 150 29 -
KQVQMFIIGCTPCMGEYW VL1_HPV49 154 28 -
KQVQMFIVGCVPCLGEHW O56958 152 28 -
KQIQMFIVGCTPCVGEHW P88804 152 28 -
KQVQMFVVGCVPCLGEHW VL1_HPV15 152 28 -
KQTQLCIIGCAPPIGEHW VL1_HPV51 151 29 -
KQVQMFIIGCIPCLGEYW VL1_HPV22 152 28 -
KQVQMFIIGCTPCLGEYW VL1_HPV23 152 28 -
KQTQLCIVGCTPPMGEYW O91953 150 29 -
KQTQMFMIGCKPALGEHW VL1_COPV 155 31 -
KQVQLLMLGCVPATGEHW O57126 154 31 -
KQVQLLMLGCVPATGEHW VL1_CRPVK 152 31 -
KQTQMFLIGCTPATGEHW VL1_HPV63 153 30 -
KQTQMFIIGCTPAIGEHW VL1_HPV65 153 28 -
KQTQMFIIGCTPAIGEHW VL1_HPV04 153 28 -
KQTQMFLVGCTPASGEHW VL1_HPV1A 157 30 -
KQTQLLIVGCKPAVGEYW VL1_HPV50 151 29 -
KQTQMFIVGCVPAQGEHW Q84359 181 29 -
KQQQILLLGCTPAEGEYW VL1_BPV1 148 29 -
KQQQILLLGCTPAIGEYW VL1_PAPVE 150 29 -
KQMQLFIVGCKPATGEHW VL1_HPV60 155 31 -
KQQQILLLGCTPAEGEYW VL1_BPV2 148 29 -
KQQQKLLLGCTPAEGEYW Q96640 148 29 -
KQSQILIVGCAPATGEYW VL1_HPV48 151 29 -
KQVQLFIVGCVPCDGEHW VL1_BPV4 150 28 -
KQQQVLLVGCTPALGEYW P89030 148 29 -
KQQQVLLVGCTPAVGEYW P89031 148 29 -
KQQQVLMLGCTPAIGEYW VL1_PAPVD 149 29 -
KQTQLLIVGAKPAKGEYW VL1_HPV41 177 34 -

Motif 5 width=24
Element Seqn Id St Int Rpt
GDCPPLELINTVIQDGDMVDTGFG O00530 209 13 -
GDCPPLELINTVIQDGDMVDTGFG O92282 183 13 -
GDCPPLELINTVIQDGDMVDTGFG Q81015 183 13 -
GDCPPLELKNSVIQDGDMVDTGFG Q81017 184 13 -
GDCPPLELKNSVIQDGDMVDTGFG VL1_HPV31 184 13 -
GDCPPLELINTVIQDGDMVHTGFG VL1_HPV16 209 13 -
GACPPLELMNTVIEDGDMIDTGFG O90730 213 13 -
GECPPLELLNTVLQDGDMVDTGFG VL1_HPV35 183 13 -
GDCPPLQLINSVIQDGDMVDTGFG VL1_HPV52 212 13 -
GDCPPLELITAPIQDGDMVDTGFG VL1_HPV28 182 12 -
NDCPPLELINTIIEDGDMVDTGFG VL1_HPV33 183 12 -
GDCPALELVNSVIQDGDMVDTGYG VL1_RHPV1 180 11 -
TDCPPLELFNSIIEDGDMVDTGFG VL1_HPV58 209 12 -
GDCPPLELITSPIQDGDMVDTGYG Q81958 182 12 -
GDCPPLELITSPIQDGDMVDTGYG VL1_HPV10 210 12 -
GDCPPLELMTTHIEDGDMVDTGYG VL1_HPV29 183 13 -
GDCPPLELITAPIQDGDMVDTGYG Q81961 182 12 -
GDCPPLELITAPIQDGDMVDTGYG VL1_HPV03 210 12 -
GDCPPLELVNSPIQDGDMVDIGFG VL1_HPV30 190 13 -
GDCPPLELKNSFIQDGDMVDVGFG VL1_HPV42 180 11 -
GDCPPLELISSVIQDGDMVDTGFG VL1_HPV13 180 13 -
GDCPPLELINTPIEDGDMVDTGYG Q81971 183 13 -
GDCPPLELMTSYIQDGDMVDTGYG O56951 245 13 -
GDCPPLELITSVIQDGDMVDTGFG VL1_HPV6A 179 13 -
GDCPPLELVNSYIQDGDMVDIGFG VL1_HPV54 179 13 -
GDCPPLELITSVIQDGDMVDTGFG VL1_HPV11 180 13 -
GDCPALELITSVIQDGDMVDTGFG Q98003 206 13 -
GDCPPLELINSPIEDGDMVDTGFG VL1_HPV53 181 13 -
GDCPPLELITSVIEDGDMVDTGFG VL1_HPV55 180 13 -
GSCPPIELINSAIQDGDMADIGYG VL1_HPV21 185 13 -
GDCPPLELITSVIEDGDMVDTGFG VL1_HPV44 180 13 -
GDCPPLELVNTPIEDGDMIDTGYG VL1_HPV39 182 13 -
GDCPPLELQNSVIQDGDMADVGFG VL1_HPV32 180 11 -
TDCPPLEFTNSTIQDGDMVETGYG Q82003 211 13 -
TDCPPLEFTNSTIQDGDMVETGYG Q82004 183 13 -
GSCPPIELKNTVIEDGDMADIGYG VL1_HPV14 185 13 -
GSCPPIELINSVIEDGDMADIGYG VL1_HPV25 183 13 -
GDCPPLALVNTPIEDGDMVDTGFG VL1_HPV66 182 13 -
GDCPPLALINTPIEDGDMIDTGFG VL1_HPV56 217 13 -
GDCPPLELKNTPIQDGDMIDVGFG Q82010 181 13 -
GDCPPLELVTSVIQDGDMVDTGFG VL1_PCPV1 180 13 -
GDCPPLELISSIIEDGDMIDTGFG VL1_HPV26 182 13 -
GDCPPLELVNTPIQDGDMIDTGYG VL1_HPVME 183 13 -
GSCPPIELINSVIEDGDMADIGYG VL1_HPV19 212 13 -
GKCPPLELVNTVIEDGDMVDIGFG O56945 184 12 -
GDCPPLQFTNTTIEDGDMVETGFG P89427 196 12 -
GDCPPLQFTNTTIEDGDMVETGFG VL1_HPV57 196 12 -
GDCPPLELKNTIIEDGDMVDTGYG VL1_HPV45 210 13 -
GDCPPLELVNTAIEDGDMIDTGYG VL1_HPV70 181 11 -
GDCPPLELVTSVIQDGDMVDTGFG O37391 180 13 -
GLCPPLELKNTVIEDGDMVDIGFG VL1_HPV17 184 14 -
GDCPPLELVNTPIEDGDMIDTGYG VL1_HPV68 183 13 -
GKCPPLELVNTVIEDGDMVDIGFG O56939 184 12 -
GLCPPIELKNTVIEDGDMADIGFG VL1_HPV08 182 12 -
TDCPPLEFTNTTIQDGDMVETGYG VL1_HPV61 184 13 -
GDCPPLQFTNTTIEDGDMVETGFG VL1_HPV2A 195 12 -
GSCPPIELKNTAIQDGDMADIGYG VL1_HPV20 183 13 -
GLCPPIELKNTYIEDGDMADIGFG VL1_HPV5B 192 13 -
GECPPLELKNTTIQDGDMIDVGFG VL1_HPV34 206 11 -
GLCPPLELKNSVIEDGDMFDIGFG VL1_HPV38 183 13 -
GDCPPLQFTNSTIEDGDMVETGFG VL1_HPV27 289 12 -
GLCPPIELKNTYIQDGDMADIGFG VL1_HPV47 181 11 -
GRCPPIKLVNSVIQDGDMADIGYG VL1_HPV24 185 13 -
GLCPPIELKNTYIQDGDMADIGFG VL1_HPV05 183 13 -
GDCPPLELKNTVLEDGDMVDTGYG VL1_HPV18 244 13 -
GVCPPIELKNTFIEDGDMADIGFG VL1_HPV12 183 13 -
YACPPIELRNTVIEDGDMADIGYG O12670 185 13 -
GDCPVLELKSEVIEDGDMVDAGFG VL1_HPV07 181 13 -
GLCPPIELRNTVIEDGDMFDIGFG VL1_HPV09 184 14 -
RLCPPIELKTTYIEDGDMADIGFG VL1_HPV36 183 13 -
GQCPPLELKNTVIEDGDMFDIGFG VL1_HPV37 184 14 -
GDCPVLELKTEVIQDGDMVDTGFG VL1_HPV40 181 13 -
GKCPPLELINSVIQDGDMIDIGFG VL1_HPV49 184 12 -
GKCPPLELKNTVIEDGDMFDIGFG O56958 184 14 -
GICPPIELKNTFIEDGDMADIGFG P88804 183 13 -
GKCPPLELKNTVIEDGDMFDIGFG VL1_HPV15 184 14 -
GDCPPLELVSSVIQDGDMIDTGFG VL1_HPV51 182 13 -
GLCPPLELKNGVIEDGDMFDIGFG VL1_HPV22 183 13 -
GLCPPLELKNSVIEDGDMFDIGFG VL1_HPV23 183 13 -
GDCPVIELKSEVIEDGDMVDTGFG O91953 181 13 -
GQCPPIELRNTTIEDGDMVDIGFG VL1_COPV 186 13 -
TDCPPIELVNTVIEDGDMCEIGFG O57126 185 13 -
TDCPPIELVNTVIEDGDMCEIGFG VL1_CRPVK 183 13 -
GDCPPIELVNTVIEDGDMFDIGLG VL1_HPV63 184 13 -
GDCPPIELVNTYIEDGDMCDIGFG VL1_HPV65 184 13 -
GDCPPIELVNSYIQDGDMCDIGFG VL1_HPV04 184 13 -
GDCPRVQMIESVIEDGDMMDIGFG VL1_HPV1A 187 12 -
GKCPPIQLVNSYIQDGDMGDIGFG VL1_HPV50 182 13 -
GDCPPIQRMSGMIEDGDMGDIGYG Q84359 212 13 -
GACPPLELKNKHIEDGDMMEIGFG VL1_BPV1 179 13 -
GSCPPIELKNKPIEDGDMMDIGFG VL1_PAPVE 181 13 -
GSCPPIKLTQSIIQDGEMCDTGFG VL1_HPV60 185 12 -
GACPPLELKNKHIEDGDMMEIGFG VL1_BPV2 179 13 -
GACPPLELKNKHIEDGDMMEIGFG Q96640 179 13 -
GAAPPIQLVNTVIQDGDMGDIGFG VL1_HPV48 180 11 -
GDCPPIELKNTKIQDGEMCDTGFG VL1_BPV4 179 11 -
GSCPALELKHKPIEDGDMMDIGFG P89030 179 13 -
GSCPPLELKHKPIEDGDMMDIGFG P89031 179 13 -
GSCPPIELKLSFIEDGDMMDIGFG VL1_PAPVD 180 13 -
DKCPALELKSSYIEDADMSDIGLG VL1_HPV41 210 15 -

Motif 6 width=21
Element Seqn Id St Int Rpt
KSEVPLDICTSICKYPDYIKM O00530 243 10 -
KSEVPLDICTSICKYPDYIKM O92282 217 10 -
KSEVPLDICTSICKYPDYIKM Q81015 217 10 -
KSNVPLDICNSICKYPDYLKM Q81017 218 10 -
KSNVPLDICNSICKYPDYLKM VL1_HPV31 218 10 -
KSEVPLDICTSICKYPDYIKM VL1_HPV16 243 10 -
KSDVPLDICTSICKYPDYLGM O90730 247 10 -
KSDVPLDICSSICKYPDYLKM VL1_HPV35 217 10 -
KSDVPIDICSSVCKYPDYLQM VL1_HPV52 246 10 -
KSDVPLDICQSTCKYPDYLGM VL1_HPV28 216 10 -
KSDVPIDICGSTCKYPDYLKM VL1_HPV33 217 10 -
KSDVPIDICTSVCKYPDYLKM VL1_RHPV1 214 10 -
KSDVPIDICNSTCKYPDYLKM VL1_HPV58 243 10 -
KSDVPIDICQSTCKYPDYLGM Q81958 216 10 -
KSDVPIDICQSTCKYPDYLGM VL1_HPV10 244 10 -
KSDVPLDICQSTCKYPDYLGM VL1_HPV29 217 10 -
KSDVPLDICQTTCKYPDYLGM Q81961 216 10 -
KSDVPLDICQTTCKYPDYLGM VL1_HPV03 244 10 -
KSDVPLDISQSTCKYPDYLKM VL1_HPV30 224 10 -
KAEVPLDIVNSITKYPDYLKM VL1_HPV42 214 10 -
KSDVPLDICTSTCKYPDYLQM VL1_HPV13 214 10 -
KSEVPLDICQSICKYPDYLQM Q81971 217 10 -
KSDVPLDICQSICKYPDYLGM O56951 279 10 -
KSDVPIDICGTTCKYPDYLQM VL1_HPV6A 213 10 -
KSEVPLDVATSICKYPDYLKM VL1_HPV54 213 10 -
KSDVPLDICGTVCKYPDYLQM VL1_HPV11 214 10 -
KSDVPLDICNTTCKYPDYLQM Q98003 240 10 -
KSDVPLDIVQSTCKYPDYLKM VL1_HPV53 215 10 -
KSDVPLDICTATCKYPDYLQM VL1_HPV55 214 10 -
RSDVSLDIVNETCKYPDFLKM VL1_HPV21 219 10 -
KSDVPLDICTATCKYPDYLQM VL1_HPV44 214 10 -
KSEVPLDICQSICKYPDYLQM VL1_HPV39 216 10 -
KAEVPLDIMNSISKYPDYLKM VL1_HPV32 214 10 -
KSEVPLDICTTTCKYPDYLQM Q82003 245 10 -
KSEVPLDICTTTCKYPDYLQM Q82004 217 10 -
RSDVSLDIVNEICKYPDFLKM VL1_HPV14 219 10 -
RADVSLDIVNETCKYPDFLKM VL1_HPV25 217 10 -
KAEVPLDIVQSTCKYPDYLKM VL1_HPV66 216 10 -
KAEVPLDIVQSTCKYPDYLKM VL1_HPV56 251 10 -
KSDVPIDISNTTCKYPDYLGM Q82010 215 10 -
KSDVPLDICTATCKYPDYLQM VL1_PCPV1 214 10 -
KSDVPIDISQSTCKYPDYLKM VL1_HPV26 216 10 -
KSEVPLDICQSVCKYPDYLQM VL1_HPVME 217 10 -
RSDVSLDIVNETCKYPDFLKM VL1_HPV19 246 10 -
KSDVSLDIVNNICKYPDFLKM O56945 218 10 -
KSDVPLDICTNICKYPDYLKM P89427 230 10 -
KSDVPLDICTNICKYPDYLKM VL1_HPV57 230 10 -
KCEVPLDICQSICKYPDYLQM VL1_HPV45 244 10 -
KSEVPLDICQSVCKYPDYLQM VL1_HPV70 215 10 -
KSDVPLDICTSTCKYPDYLQM O37391 214 10 -
KSDVSLDIVNETCKYPDFLSM VL1_HPV17 218 10 -
KSEVPLDICQSVCKYPDYLQM VL1_HPV68 217 10 -
KSDVSLDIVNNICKYPDFLKM O56939 218 10 -
RSDVSLDIVNEICKYPDFLKM VL1_HPV08 216 10 -
KSEVPLDICTTICKYPDYLQM VL1_HPV61 218 10 -
KSDVPLDICTNTCKYPDYLKM VL1_HPV2A 229 10 -
RADVSLDIVNETCKYPDFLKM VL1_HPV20 217 10 -
RSDVSLDIVNETCKYPDFLKM VL1_HPV5B 226 10 -
KSDVPIDISNTICKYPDYLGM VL1_HPV34 240 10 -
RSDVSLDIVNETCKYPDFLTM VL1_HPV38 217 10 -
RSDVPLDICTNVCKYPDYLKM VL1_HPV27 323 10 -
RSDVSLDIVNETCKYPDFLKM VL1_HPV47 215 10 -
RSDVSLDIVNETCKYPDFLKM VL1_HPV24 219 10 -
RSDVSLDIVNETCKYPDFLKM VL1_HPV05 217 10 -
KCEVPLDICQSICKYPDYLQM VL1_HPV18 278 10 -
RSDVSLDIVNETCKYPDFLKM VL1_HPV12 217 10 -
RSDVSLDIVNETCKYPDFLRM O12670 219 10 -
KSDVPLDLCTSISKYPDYLGM VL1_HPV07 215 10 -
KSDVSLDIVDETCKYPDFLTM VL1_HPV09 218 10 -
RSDVSLDIVNETCKYPDFLKM VL1_HPV36 217 10 -
KSDVSLDIVNEICKYPDFLTM VL1_HPV37 218 10 -
KSDVPLDLCTSISKYPDYLGM VL1_HPV40 215 10 -
RSDVSLDIVNDICKYPDFLKM VL1_HPV49 218 10 -
KSDVSLDIVNETCKYPDFLTM O56958 218 10 -
RADVSLDIVNETCKYPDFLKM P88804 217 10 -
KSDVSLDIVNETCKYPDFLTM VL1_HPV15 218 10 -
KSDVPLDISQSVCKYPDYLKM VL1_HPV51 216 10 -
RSDVSLDIVNEICKYPDFLTM VL1_HPV22 217 10 -
RSDVSLDLVNEVCKYPDFLTM VL1_HPV23 217 10 -
KSDVPLDLCNTKSKYPDYLGM O91953 215 10 -
KSGVPIDIVNSACKYPDYLKM VL1_COPV 220 10 -
LSEVPLELAQSISKYPDYLKM O57126 219 10 -
LSEVPLELAQSISKYPDYLKM VL1_CRPVK 217 10 -
KADAPLDIAGTVCKYPDYIKM VL1_HPV63 218 10 -
KSSAPLDVVATMCKWPDFLKM VL1_HPV65 218 10 -
KSSAPLDVIATVCKWPDFLKM VL1_HPV04 218 10 -
KSDVPLDVVQATCKYPDYIRM VL1_HPV1A 221 10 -
RAGVPLDIVDSISLWPDLLKM VL1_HPV50 216 10 -
KSEVPLEVVDSICKYPDYLGM Q84359 246 10 -
KSDLPLDIQNEICLYPDYLKM VL1_BPV1 213 10 -
KSDLPLDIAKDICLYPDYLKM VL1_PAPVE 215 10 -
KSGVPLDITNEICKYPDLLKM VL1_HPV60 219 10 -
KSDLPLDIQNEICLYPDYLKM VL1_BPV2 213 10 -
KSDLPLDIQNEICLYPDYLKM Q96640 213 10 -
RAGVPLELIDSISIWPDFLKM VL1_HPV48 214 10 -
KSGAPLDIVDQIVKYPDFLKM VL1_BPV4 213 10 -
KSDLPLDITNEICLYPDYLRM P89030 213 10 -
RSDLPLDIVNEICLYPDYLRM P89031 213 10 -
KSDLPLDIANSICLYPDYLKM VL1_PAPVD 214 10 -
KSDAPLDIVDSICKYPDYLQM VL1_HPV41 244 10 -

Motif 7 width=24
Element Seqn Id St Int Rpt
YGDSLFFYLRREQMFVRHLFNRAG O00530 268 4 -
YGDSLFFYLRREQMFVRHLFNRAG O92282 242 4 -
YGDSLFFYLRREQMFVRHLFNRAG Q81015 242 4 -
YGDTLFFYLRREQMFVRHFFNRSG Q81017 243 4 -
YGDTLFFYLRREQMFVRHFFNRSG VL1_HPV31 243 4 -
YGDSLFFYLRREQMFVRHLFNRAG VL1_HPV16 268 4 -
YGDSLFFFLRREQMFVRHLFNRAG O90730 272 4 -
YGDMLFFYLRREQMFVRHLFNRAG VL1_HPV35 242 4 -
YGDSLFFFLRREQMFVRHFFNRAG VL1_HPV52 271 4 -
YGDSMFFYLRKEQLFARHFFNRAG VL1_HPV28 241 4 -
YGDSLFFFLRREQMFVRHFFNRAG VL1_HPV33 242 4 -
YGDSLFFYLRREQMFVRHLFNRAG VL1_RHPV1 239 4 -
YGDSLFFFLRREQMFVRHFFNRAG VL1_HPV58 268 4 -
YGDSMFFYLRREQLFARHFFNRAS Q81958 241 4 -
YGDSMFFYLRREQLFARHFFNRAS VL1_HPV10 269 4 -
YGDSMFFFLRREQLFARHFFNRAG VL1_HPV29 242 4 -
YGDSMFFYLRKEQLFARHFLNRAG Q81961 241 4 -
YGDSMFFYLRKEQLFARHFLNRAG VL1_HPV03 269 4 -
YGDSMWFYLRREQLFARHYFNRAG VL1_HPV30 249 4 -
YGDSMFFFLRREQMFVRHLFNRAG VL1_HPV42 239 4 -
YGDRLFFYLRKEQMFARHFFNRAG VL1_HPV13 239 4 -
YGDSMFFCLRREQVFARHFWNRSG Q81971 242 4 -
YGDSMFFFLRREQLFARHFFNRAG O56951 304 4 -
YGDRLFFFLRKEQMFARHFFNRAG VL1_HPV6A 238 4 -
YGDSLFFYLRREQMFVRHMLNRAG VL1_HPV54 238 4 -
YGDRLFFYLRKEQMFARHFFNRAG VL1_HPV11 239 4 -
YGDRLFFYLRKEQMFARHFFNRAG Q98003 265 4 -
YGDSMWFYLRREQLFTRHFFNRAG VL1_HPV53 240 4 -
YGDRLFFYLRKEQMFARHFFNRAG VL1_HPV55 239 4 -
YGDSCFFYARREQCYARHFFVRGG VL1_HPV21 244 4 -
YGDRLFFYLRKEQMFARHFFNRAG VL1_HPV44 239 4 -
YGDSMFFCLRREQLFARHFWNRGG VL1_HPV39 241 4 -
YGDNMFFFLRREQMFVRHLFNRAG VL1_HPV32 239 4 -
YGDCMFFCLRREQMFARHFFNRQG Q82003 270 4 -
YGDCMFFCLRREQMFARHFFNRQG Q82004 242 4 -
YGDSCFFYARREQCYARHFFVRGG VL1_HPV14 244 4 -
YGDSCFFYARREQCYARHFFVRGG VL1_HPV25 242 4 -
YGDSMWFYLRREQLFARHYFNRAG VL1_HPV66 241 4 -
YGDSMWFYLRREQLFARHYFNRAG VL1_HPV56 276 4 -
YGDSMWFYLRREQMFVRHLFNRAG Q82010 240 4 -
YGDRLFFSLRKEQMFARHFFNRAG VL1_PCPV1 239 4 -
YGNSMFFFLRREQLFARHFYNKAG VL1_HPV26 241 4 -
YGDSMFFCLRREQLFARHFWNRGG VL1_HPVME 242 4 -
YGDSCFFYARREQCYARHFFVRGG VL1_HPV19 271 4 -
YGDSCFFYARREQCYARHFFVRGG O56945 243 4 -
YGDSMFFSLRREQMFTRHFFNRGG P89427 255 4 -
YGDSMFFSLRREQMFTRHFFNRGG VL1_HPV57 255 4 -
YGDSMFFCLRREQLFARHFWNRAG VL1_HPV45 269 4 -
YGDSMFFCLRKEQLFARHFWNRGG VL1_HPV70 240 4 -
YGDRLFFYLRKEQMFARHFFNRAG O37391 239 4 -
YGDACFFFARREQCYARHYFVRGG VL1_HPV17 243 4 -
YGDSMFFCLRREQLFARHFWNRGG VL1_HPV68 242 4 -
YGDSCFFYARREQCYARHFFVRGG O56939 243 4 -
YGDACFFYARREQCYARHFFVRGG VL1_HPV08 241 4 -
YGDCMFFCLRREQMFARHFFNRQG VL1_HPV61 243 4 -
YGDSMFFSLRREQMFTRHFFNLGG VL1_HPV2A 254 4 -
YGDSCFFYARREQCYARHFFVRGG VL1_HPV20 242 4 -
YGDACFFYARREQCYARHFFVRGG VL1_HPV5B 251 4 -
YGDSMWFYIRREQMFVRHLFNRAG VL1_HPV34 265 4 -
YGDSCFFFVRREQCYARHYFVRGG VL1_HPV38 242 4 -
YGDSMFFSLRREQMFTRHFFNRAG VL1_HPV27 348 4 -
YGDACFFYARREQCYARHFFVRGG VL1_HPV47 240 4 -
YGDSCFFFARREQCYARHFFVRGG VL1_HPV24 244 4 -
YGDACFFYARREQCYARHFFVRGG VL1_HPV05 242 4 -
YGDSMFFCLRREQLFARHFWNRAG VL1_HPV18 303 4 -
YGDACFFYARREQCYARHFFVRGG VL1_HPV12 242 4 -
YGDSCFFYARREQCYARHFFVRGG O12670 244 4 -
YGNSLFFFLRREQMFVRHFFNRAG VL1_HPV07 240 4 -
YGDACFFFARREQCYARHYYVRGG VL1_HPV09 243 4 -
YGDACFFYARREQCYARHFFVRGG VL1_HPV36 242 4 -
YGDACFFFARREQCYARHYFVRGG VL1_HPV37 243 4 -
YGNSLFFFLRREQMFVRHFFNRAG VL1_HPV40 240 4 -
YGDACFFYARREQCYARHFFVRGG VL1_HPV49 243 4 -
YGDACFFFARREQCYARHYFVRGG O56958 243 4 -
YGDACFFYARREQCYARHFFVRGR P88804 242 4 -
YGDACFFFARREQCYARHYFVRGG VL1_HPV15 243 4 -
YGNSMFFHLRREQIFARHYYNKLV VL1_HPV51 241 4 -
YGDSCFFCARREQCYARHNFVRGG VL1_HPV22 242 4 -
YGDACFFCARREQCYARHYFVRGG VL1_HPV23 242 4 -
YGNSLFFFLRREQMFVRHFFNKAG O91953 240 4 -
YGDRCFFFVRREQLYARHIMSRSG VL1_COPV 245 4 -
FGDSMFFYARREQMYARHFFSRAG O57126 244 4 -
FGDSMFFYARREQMYARHFFSRAG VL1_CRPVK 242 4 -
HGNSLFFFARREQMYLRHVFTHAG VL1_HPV63 243 4 -
YGDSLFFYGRREQLYARHFFVRAG VL1_HPV65 243 4 -
YGDSLFFFGRREQLYARHFFVRAG VL1_HPV04 243 4 -
YGNSMFFFARREQMYTRHFFTRGG VL1_HPV1A 246 4 -
YGDHVFFYAKQEQLYARHLFTHAG VL1_HPV50 241 4 -
HGNSCFFYARQARLYSRHFFNRAG Q84359 271 4 -
AGNSMFFFARKEQVYVRHIWTRGG VL1_BPV1 238 4 -
AGNSMFFFARKEQVYVRHIWSRGG VL1_PAPVE 240 4 -
YGDAVFFFGKREQIYSRHYFVRGG VL1_HPV60 244 4 -
AGNSMFFFARKEQVYVRHIWTRGG VL1_BPV2 238 4 -
AGNSMFFFARKEQVYVRHIWTRGG Q96640 238 4 -
YGDSVFFFGKREQCYARHLFARAG VL1_HPV48 239 4 -
YGNSMFFYAKREQMYVRHLWARAG VL1_BPV4 238 4 -
AGNSMFFFARKEQVYVRHVWSRGG P89030 238 4 -
AGNSMFFFARKEQVYVRHVWARGG P89031 238 4 -
AGNSMFFFARKEQVYVRHIWTPWG VL1_PAPVD 239 4 -
YGDHMFFYVRREALYARHIMQHAG VL1_HPV41 269 4 -

Motif 8 width=23
Element Seqn Id St Int Rpt
PTPSGSMVTSDAQIFNKPYWLQR O00530 319 27 -
PTPSGSMVTSDAQIFNKPYWLQR O92282 293 27 -
PTPSGSMVTSDAQIFNKPYWLQR Q81015 293 27 -
PTPSGSMVTSDAQIFNKPYWMQR Q81017 294 27 -
PTPSGSMVTSDAQIFNKPYWMQR VL1_HPV31 294 27 -
PTPSGSMVTSDAQIFNKPYWLQR VL1_HPV16 319 27 -
PTPSGSMVSSESQLFNKPYWLQR O90730 323 27 -
PTPSGSMVTSDAQIFNKPYWLQR VL1_HPV35 291 25 -
PTPSGSMVTSESQLFNKPYWLQR VL1_HPV52 324 29 -
PTPSGSMISSEAQLFNKPYWLRR VL1_HPV28 293 28 -
PTPSGSMVTSESQLFNKPYWLQR VL1_HPV33 293 27 -
PTPSGSMVTSDAQLFNKPYWLQK VL1_RHPV1 290 27 -
PTPSGSIVTSESQLFNKPYWLQR VL1_HPV58 319 27 -
PTPSGSMVTSEAQLFNKPYWLRR Q81958 292 27 -
PTPSGSMVTSEAQLFNKPYWLRR VL1_HPV10 320 27 -
PTPSGSMVTSEAQIFNKPYWLQQ VL1_HPV29 293 27 -
PTPSGSMVTSETQLFNKPYWLRR Q81961 295 30 -
PTPSGSMVTSETQLFNKPYWLRR VL1_HPV03 323 30 -
ATPSGSMVTSEAQLFNKPYWLQR VL1_HPV30 300 27 -
PTPSGSMVTSDAQLFNKPYWLQQ VL1_HPV42 293 30 -
NTPSGSLVSSEAQLFNKPYWLQK VL1_HPV13 287 24 -
PSPSGSVVTSDSQLFNKPYWLHK Q81971 293 27 -
PTPSGSMVTSEAQIFNKPYWLQQ O56951 355 27 -
NTPSGSLVSSEAQLFNKPYWLQK VL1_HPV6A 289 27 -
ATPSGSMVTSEYQIFNKPYWLQR VL1_HPV54 287 25 -
HTPSGSLVSSEAQLFNKPYWLQK VL1_HPV11 290 27 -
NTPSGSLVSSETQLFNKPFWLQR Q98003 315 26 -
ATPSGSMITSEAQLFNKPYWLQR VL1_HPV53 291 27 -
NTPSGSLVSSETQLFNKPFWLQR VL1_HPV55 289 26 -
PTVSGSLVSSDAQLFNRPFWLQR VL1_HPV21 307 39 -
NTPSGSLVSSETQLFNKPFWLQK VL1_HPV44 289 26 -
PSPSGSMVTSDSQLFNKPYWLHK VL1_HPV39 292 27 -
PTPSGSMVTSDAQIFNKPYWLQQ VL1_HPV32 293 30 -
PTPSGSMVSSDAQLFNKPYWLQR Q82003 323 29 -
PTPSGSMVSSDAQLFNKPYWLQR Q82004 295 29 -
PTVSGSLVSSDAQLFNRPFWLQR VL1_HPV14 307 39 -
PTVSGSLVSSDAQLFNRPFWLQR VL1_HPV25 306 40 -
ATPSGSMITSEAQLFNKPYWLQR VL1_HPV66 292 27 -
ATPSGSMITSEAQLFNKPYWLQR VL1_HPV56 327 27 -
PTPSGSMVSSDAQLFNKPYWLQK Q82010 291 27 -
NTPSGSLVSSEAQLFNKPYWLHK VL1_PCPV1 290 27 -
ATPSGSMVTSDAQLFNKPYWLQR VL1_HPV26 293 28 -
PSPSGSMVSSDSQLFNKPYWLHK VL1_HPVME 293 27 -
PTVSGSLVSSDAQLFNRPFWLQR VL1_HPV19 335 40 -
PTVSGSLVSTDAQLFNRPFWLQR O56945 303 36 -
STPSGSMVSSEQQLFNKPYWLRR P89427 305 26 -
STPSGSMVSSEQQLFNKPYWLRR VL1_HPV57 305 26 -
PSPSGSIITSDSQLFNKPYWLHK VL1_HPV45 322 29 -
PSPSGSMVSSDSQLFNKPYWLHK VL1_HPV70 291 27 -
NTPSGSLVSSEAQLFNKPYWLHK O37391 290 27 -
PTVSGSLVTSDAQLFNRPFWLRR VL1_HPV17 303 36 -
PSPSGSMVSSDSQLFNKPYWLHK VL1_HPV68 293 27 -
PTVSGSLVSTDAQLFNRPFWLQR O56939 303 36 -
PTVSGSLVSSDAQLFNRPFWLQR VL1_HPV08 304 39 -
PTPSGSMVSSDSQLFNKPYWLQR VL1_HPV61 294 27 -
STPSGSMVSSEQQLFNKPYWLRR VL1_HPV2A 304 26 -
PTVSGSLVSSDAQLFNRPFWLQR VL1_HPV20 305 39 -
PTVSGSLVSSDAQLFNRPFWLQR VL1_HPV5B 314 39 -
PTPSGSMVSSDAQIFNKPYWLQK VL1_HPV34 316 27 -
PTVSGSLVTSDAQLFNRPFWLQR VL1_HPV38 302 36 -
STPSGSMVSSEQQLFNKPYWLRR VL1_HPV27 398 26 -
PTVSGSLVSSDAQLFNRPFWLQR VL1_HPV47 303 39 -
PTVSGSLVSSDAQLFNRPFWLQR VL1_HPV24 307 39 -
PTVSGSLVSSDAQLFNRPFWLQR VL1_HPV05 305 39 -
PSPSGSIVTSDSQLFNKPYWLHK VL1_HPV18 354 27 -
PTVSGSLVSSDAQLFNRPFWLQR VL1_HPV12 305 39 -
PTVSGSLVSSDAQLFNRPFWLQR O12670 307 39 -
STPSGSLVTSDSQIFNKPLWIQK VL1_HPV07 291 27 -
PTVSGSLVTSDAQLFNRPFWLQR VL1_HPV09 303 36 -
PTVSGSLVSSDAQLFNRPFWLQR VL1_HPV36 305 39 -
PTVSGSLVTSDAQLFNRPFWLRR VL1_HPV37 303 36 -
STPSGSLVTSDSQIFNKPLWIQK VL1_HPV40 291 27 -
PTVSGSLVSTDAQLFNRPFWLQR VL1_HPV49 303 36 -
PTVSGSLVTSDAQLFNRPFWLRR O56958 303 36 -
PTVSGSLVSSDAQLFNRPFWLQR P88804 305 39 -
PTVSGSLVTSDAQLFNRPFWLRR VL1_HPV15 303 36 -
ATPSGSMITSDSQIFNKPYWLHR VL1_HPV51 293 28 -
PTVSGSLVTSDAQLFNRPFWLKR VL1_HPV22 299 33 -
PTVSGSLVTSDSQLFNRPFWLKR VL1_HPV23 299 33 -
STPSGSLVTSDSQLFNKPLWMQK O91953 291 27 -
STPSGSLVSSEGQLFNRPYWIQR VL1_COPV 295 26 -
ITPSGSLVSSDSQVFNRAYWLQK O57126 299 31 -
ITPSGSLVSSDSQVFNRAYWLQK VL1_CRPVK 297 31 -
VAPSGSLVSSDVQIFNRPYWLQR VL1_HPV63 298 31 -
GTPSGSLVSSESQLFNRPYWLNR VL1_HPV65 302 35 -
GTPSGSLVSSESQLFNRPYWLNR VL1_HPV04 302 35 -
GTPSGSMVSSDVQLFNRSYWLQR VL1_HPV1A 300 30 -
TTPSGSLNTSSSQLFNRPYWIRR VL1_HPV50 301 36 -
GTPSGSLVSSDAVLFNRPYWLER Q84359 324 29 -
GSPSGSLVSTDNQIFNRPYWLFR VL1_BPV1 290 28 -
GVPSGSLVSTDGQLFNRPYWLFR VL1_PAPVE 292 28 -
PTPSGSVASSDNQLFNRPYWLHR VL1_HPV60 298 30 -
GSPSGSLVSTDNQIFNRPYWLFR VL1_BPV2 290 28 -
GSPSGSLVSTDNQIFNRPYWLFR Q96640 290 28 -
TTPSGSLNTSDSQLFNRPYWLRR VL1_HPV48 298 35 -
GSPSGSLVSSDQQIYNRPFWIQR VL1_BPV4 293 31 -
GAPSGSLLSTDGLIFNRPYWLYR P89030 289 27 -
GAPSGSLLSTDGLIFNRPYWLYR P89031 289 27 -
ASPSGSLVSTDGQLFNRPYWILR VL1_PAPVD 290 27 -
MTPSGSLVATEQQLFNRPFWLQR VL1_HPV41 325 32 -

Motif 9 width=22
Element Seqn Id St Int Rpt
QGHNNGICWGNQLFVTVVDTTR O00530 343 1 -
QGHNNGICWGNQLFVTVVDTTR O92282 317 1 -
QGHNNGICWGNQLFVTVVDTTR Q81015 317 1 -
QGHNNGICWGNQLFVTVVDTTR Q81017 318 1 -
QGHNNGICWGNQLFVTVVDTTR VL1_HPV31 318 1 -
QGHNNGICWGNQLFVTVVDTTR VL1_HPV16 343 1 -
QGHNNGICWGNQIFVTVVDTTR O90730 347 1 -
QGHNNGICWSNQLFVTVVDTTR VL1_HPV35 315 1 -
QGHNNGICWGNQLFVTVVDTTR VL1_HPV52 348 1 -
QGHNNGICWANQLFVTVVDTTR VL1_HPV28 317 1 -
QGHNNGICWGNQVFVTVVDTTR VL1_HPV33 317 1 -
QGHNNGICWGNQVFLTVVDTTR VL1_RHPV1 314 1 -
QGHNNGICWGNQLFVTVVDTTR VL1_HPV58 343 1 -
QGHNNGICWANQLFVTVVDTTR Q81958 316 1 -
QGHNNGICWANQLFVTVVDTTR VL1_HPV10 344 1 -
QGHNNGICWANQVFLTVVDTTR VL1_HPV29 317 1 -
QGHNNGICWANQLFVTVVDTTR Q81961 319 1 -
QGHNNGICWANQLFVTVVDTTR VL1_HPV03 347 1 -
QGHNNGICWGNQVFVTVVDTTR VL1_HPV30 324 1 -
QGHNNGICWGNQLFLTVVDTTR VL1_HPV42 317 1 -
QGHNNGICWGNHLFVTVVDTTR VL1_HPV13 311 1 -
QGLNNGICWHNQLFLTVVDTTR Q81971 317 1 -
QGHNNGICWGNQVFLTVVDTTR O56951 379 1 -
QGHNNGICWGNQLFVTVVDTTR VL1_HPV6A 313 1 -
QGQNNGICWGNQVFLTVVDTTR VL1_HPV54 311 1 -
QGHNNGICWGNHLFVTVVDTTR VL1_HPV11 314 1 -
QGHNNGICWGNQLFVTVVDTTR Q98003 339 1 -
QGHNNGICWNNQLFVTVVDTTR VL1_HPV53 315 1 -
QGHNNGICWGNQLFVTVVDTTR VL1_HPV55 313 1 -
QGHNNGICWFNQLFVTVVDNTR VL1_HPV21 331 1 -
QGHNNGICWGNQLFVTVVDTTR VL1_HPV44 313 1 -
QGHNNGICWHNQLFLTVVDTTR VL1_HPV39 316 1 -
QGHNNGICWGNQVFLTVVDTTR VL1_HPV32 317 1 -
QGHNNGICWFNELFVTVVDTTR Q82003 347 1 -
QGHNNGICWFNELFVTVVDTTR Q82004 319 1 -
QGHNNGICWFNQLFVTVVDNTR VL1_HPV14 331 1 -
QGHNNGICWFNQLFVTVVDNTR VL1_HPV25 330 1 -
QGHNNGICWGNQVFVTVVDTTR VL1_HPV66 316 1 -
QGHNNGICWGNQLFVTVVDTTR VL1_HPV56 351 1 -
QGQNNGICWHNQLFLTVVDTTR Q82010 315 1 -
QGHNNGICWGNTLFVTVVDTTR VL1_PCPV1 314 1 -
QGHNNGICWGNQLFVTCVDTTR VL1_HPV26 317 1 -
QGHNNGICWHNQLFLTVVDTTR VL1_HPVME 317 1 -
QGHNNGICWFNQLFVTVVDNTR VL1_HPV19 359 1 -
QGHNNGICWENQLFVTVVDNTR O56945 327 1 -
QGHNNGMCWGNRVFLTVVDTTR P89427 329 1 -
QGHNNGMCWGNRIFLTVVDTTR VL1_HPV57 329 1 -
QGHNNGICWHNQLFVTVVDTTR VL1_HPV45 346 1 -
QGHNNGICWHNQLFITVVDTTR VL1_HPV70 315 1 -
QGHNNGICWGNTLFVTVVDTTR O37391 314 1 -
QGHNNGILWGNQIFVTVADNTR VL1_HPV17 327 1 -
QGHNNGICWHNQLFLTVVDTTR VL1_HPV68 317 1 -
QGHNNGICWENQLFVTVVDNTR O56939 327 1 -
QGHNNGILWANQMFVTVVDNTR VL1_HPV08 328 1 -
QGHNNGICWFNELFVTVVDTTR VL1_HPV61 318 1 -
QGHNNGMCWGNRVFLTVVDTTR VL1_HPV2A 328 1 -
QGHNNGICWFNQLFVTVVDNTR VL1_HPV20 329 1 -
QGHNNGILWANQMFITVVDNTR VL1_HPV5B 338 1 -
QGQNNGICWHNQLFLTVVDTTR VL1_HPV34 340 1 -
QGHNNGILWGNQMFVTVADNTR VL1_HPV38 326 1 -
QGHNNGMCWGNRIFLTVVDTTR VL1_HPV27 422 1 -
QGHNNGILWANQMFVTVVDNTR VL1_HPV47 327 1 -
QGHNNGICWANQLFITVVDNTR VL1_HPV24 331 1 -
QGHNNGILWANQMFITVVDNTR VL1_HPV05 329 1 -
QGHNNGVCWHNQLFVTVVDTTP VL1_HPV18 378 1 -
QGHNNGILWANQMFVTVVDNTR VL1_HPV12 329 1 -
QGHNNGICWFNQLFVTVVDNTR O12670 331 1 -
QGHNNGICFGNQLFVTVVDTTR VL1_HPV07 315 1 -
QGHNNGILWGNQIFVTVADNTR VL1_HPV09 327 1 -
QGHNNGILWANQMFITVVDNTR VL1_HPV36 329 1 -
QGHNNGILWGNQMFITVADNTR VL1_HPV37 327 1 -
QGHNNGICFGNQLFVTVVDTTR VL1_HPV40 315 1 -
QGHNNGICWENQLFITVADNTR VL1_HPV49 327 1 -
QGHNNGILWGNQMFITVADNTR O56958 327 1 -
QGHNNGILWANQMFVTVVDNTR P88804 329 1 -
QGHNNGILWGNQMFITVADNTR VL1_HPV15 327 1 -
QGHNNGICWNNQLFITCVDTTR VL1_HPV51 317 1 -
QGHNNGILWNNQMFVTVADNTR VL1_HPV22 323 1 -
QGHNNGILWNNQMFVTVADNTR VL1_HPV23 323 1 -
QGHNNGICFGNQVFVTVVDTTR O91953 315 1 -
QGKNNGIAWGNQLFLTVVDNTR VL1_COPV 319 1 -
QGMNNGVCWDNQIFVTVVDNTR O57126 323 1 -
QGMNNGVCWDNQIFVTVVDNTR VL1_CRPVK 321 1 -
QGQNNGICWRNELFVTVADNTR VL1_HPV63 322 1 -
QGTNNGICWDNQLFVTLVDNTH VL1_HPV65 326 1 -
QGTNNGICWDNQLFVTLVDNTH VL1_HPV04 326 1 -
QGQNNGICWRNQLFITVGDNTR VL1_HPV1A 324 1 -
QGTNNCICWGNEVFVTVFDNTR VL1_HPV50 325 1 -
QGQNNGILWNNDLFVTVLDNTR Q84359 348 1 -
QGMNNGIAWNNLLFLTVGDNTR VL1_BPV1 314 1 -
QGMNNGICWLNQLFVTVGDNTR VL1_PAPVE 316 1 -
QGANNGICWGNQLFITIVDNTR VL1_HPV60 322 1 -
QGMNNGIAWNNLLFLTVGDNTR VL1_BPV2 314 1 -
QGMNNGIAWDNLLFLTVGDNTR Q96640 314 1 -
QGTNNGICWGNELFITVFDNTH VL1_HPV48 322 1 -
QGSNNGMCWNNELFVTAVDSTR VL1_BPV4 317 1 -
QGMNNGICWNNTVFVTVGDNTR P89030 313 1 -
QGMNNGICWNNTVFVTVGDNTR P89031 313 1 -
QGMNNGVCWNNTLFVTVGDNTR VL1_PAPVD 314 1 -
QGHNNGILWHNEAFVTLVDTTR VL1_HPV41 349 1 -

Motif 10 width=18
Element Seqn Id St Int Rpt
YLRHGEEYDLQFIFQLCK O00530 389 24 -
YLRHGEEYDLQFIFQLCK O92282 363 24 -
YLRHGEEYDLQFIFQLCK Q81015 363 24 -
YLRHGEEFDLQFIFQLCK Q81017 364 24 -
YLRHGEEFDLQFIFQLCK VL1_HPV31 364 24 -
YLRHGEEYDLQFIFQLCK VL1_HPV16 389 24 -
YLRHVEEYDLQFIFQLCK O90730 392 23 -
YLRHGEEYDLQFIFQLCK VL1_HPV35 361 24 -
YLRHGEEFDLQFIFQLCK VL1_HPV52 393 23 -
YLRHGEEYDLQFIFQLCK VL1_HPV28 362 23 -
YIRHVEEYDLQFVFQLCK VL1_HPV33 362 23 -
YLRHVEEFDLQFIFQLCK VL1_RHPV1 361 25 -
YVRHVEEYDLQFVFQLCK VL1_HPV58 388 23 -
YLRHGEEYDLQFIFQLCK Q81958 363 25 -
YLRHGEEYDLQFIFQLCK VL1_HPV10 391 25 -
YLRHGEEYDLQFIFQLCK VL1_HPV29 364 25 -
YLRHGEEYDLQFIFQLCK Q81961 364 23 -
YLRHGEEYDLQFIFQLCK VL1_HPV03 392 23 -
YVRHVEEYELQFVFQLCK VL1_HPV30 369 23 -
YLRHAEEYDVQFIFQLCK VL1_HPV42 362 23 -
YMRHVEEFDLQFIFQLCT VL1_HPV13 358 25 -
YARHVEEFDLQFIFQLCK Q81971 364 25 -
YLRHGEEYDLQFIFQLCK O56951 426 25 -
YMRHVEEYDLQFIFQLCS VL1_HPV6A 358 23 -
YIRHVEEYDLQFIFQLCT VL1_HPV54 356 23 -
YMRHVEEFDLQFIFQLCS VL1_HPV11 359 23 -
YMRHVEEFDLQFIFQLCS Q98003 386 25 -
YVRHAEEYELQFVFQLCK VL1_HPV53 360 23 -
YMRHVEEFDLQFMFQLCS VL1_HPV55 360 25 -
YLRHVEEYELSLILQLCK VL1_HPV21 381 28 -
YMRHVEEFDLQFMFQLCS VL1_HPV44 360 25 -
YTRHVEEYDLQFIFQLCT VL1_HPV39 363 25 -
YLRHAEEYDIQFIFQLCK VL1_HPV32 362 23 -
YLRHTEEFDLQFIFQLCK Q82003 393 24 -
YLRHTEEFDLQFIFQLCK Q82004 365 24 -
YLRHVEEYEMSLILQLCK VL1_HPV14 381 28 -
YLRHVEEYELSLILQLCK VL1_HPV25 380 28 -
YLRHVEEYELQFVFQLCK VL1_HPV66 361 23 -
YLRHVEEYELQFVFQLCK VL1_HPV56 396 23 -
YLRHAEEFDLQFVFQLCK Q82010 363 26 -
YMRHVEEFDLQFIFQLCS VL1_PCPV1 361 25 -
FIRHGEEYELQFIFQLCK VL1_HPV26 364 25 -
YIRHVEEYDLQFIFQLCT VL1_HPVME 364 25 -
YLRHVEEYEISLILQLCK VL1_HPV19 409 28 -
FLRHVEEYELSVILQLCK O56945 374 25 -
YLRHMEEYDLQFIFQLCK P89427 374 23 -
YLRHMEEYDLQFIFQLCK VL1_HPV57 374 23 -
YSRHVEEYDLQFIFQLCT VL1_HPV45 393 25 -
YTRHVEEYDLQFIFQLCT VL1_HPV70 362 25 -
YMRHVEEFDLQFIFQLCT O37391 361 25 -
YLRHVEEYQLSFILQLCK VL1_HPV17 374 25 -
YVRHVEEYDLQFIFQLCT VL1_HPV68 364 25 -
FLRHVEEYELSVILQLCR O56939 374 25 -
YLRHVEEYEISLILQLCK VL1_HPV08 378 28 -
YLRHTEEFDLQFIFQLCK VL1_HPV61 364 24 -
YLRHMEEYDLQFIFQLCK VL1_HPV2A 373 23 -
YLRHVEEYEISLILQLCK VL1_HPV20 379 28 -
YQRHVEEYEISLILQLCK VL1_HPV5B 388 28 -
YLRHAEEYDLQFVFQLCK VL1_HPV34 388 26 -
YLRHVEEYQLSFILQLCK VL1_HPV38 373 25 -
YLRHMEEYDLQFIFQLCK VL1_HPV27 468 24 -
YQRHVEEYEISVILQLCK VL1_HPV47 377 28 -
YQRHVEEYEISLILQLCK VL1_HPV24 381 28 -
YQRHVEEYEISLILQLCK VL1_HPV05 379 28 -
YSRHVEEYDLQFIFQLCT VL1_HPV18 425 25 -
YLRHVEEYEISLILQLCK VL1_HPV12 379 28 -
YLRHVEEYEVSLILQLCK O12670 381 28 -
YLRHGEEFDLQFIFQLCV VL1_HPV07 362 25 -
YLRHVEEYQISLILQLCK VL1_HPV09 374 25 -
YQRHVEEYEISLILQLCK VL1_HPV36 379 28 -
YLRHVEEYQLSIILQLCK VL1_HPV37 374 25 -
YLRHGEEFDLQFIFQLCV VL1_HPV40 362 25 -
FLRHVEEYEISIILQLCK VL1_HPV49 374 25 -
FLRHVEEYQLAIILQLCK O56958 374 25 -
YLRHVEEYEISIILQLCK P88804 379 28 -
FLRHVEEYQLSIILQLCK VL1_HPV15 374 25 -
YIRHGEEYELQFIFQLCK VL1_HPV51 363 24 -
FMRHVEEYQLSFILQLCR VL1_HPV22 369 24 -
FTRHVEEYQLSFILQLCR VL1_HPV23 369 24 -
YLRHAEEFDLQFIFQLCI O91953 362 25 -
YLRHVEEYEVSIIVQLCK VL1_COPV 367 26 -
YLRHVEEYELQFVLQLCK O57126 371 26 -
YLRHVEEYELQFVLQLCK VL1_CRPVK 369 26 -
YTRHVEEYELSFIVQLCK VL1_HPV63 368 24 -
YLRHIEEFEMEFIFQLCT VL1_HPV65 374 26 -
YLRHIEEFEMEFIFQLCK VL1_HPV04 374 26 -
FLRHTEEFDLSFIVQLCK VL1_HPV1A 369 23 -
YSRHTEEYELEFIFQLCK VL1_HPV50 380 33 -
YTRHVEEFELEFIFQLVK Q84359 393 23 -
YHRHMEEYKLAFILELCS VL1_BPV1 361 25 -
FQRHVEEYKLAFVFQLCS VL1_PAPVE 363 25 -
YLRHTEEYEVELILRLCK VL1_HPV60 372 28 -
YHRHMEEYKLAFILELCS VL1_BPV2 361 25 -
YHRHMEEYKLAFILELCS Q96640 361 25 -
YLRHTEEYEIELVFQLCK VL1_HPV48 377 33 -
YLRHVEEWDLSLIMQLCI VL1_BPV4 367 28 -
YHRHVEEYKLAFIFQLCS P89030 360 25 -
YHRHVEEYKLAFIFQLCS P89031 360 25 -
YQRHVEEFKLAFILELCS VL1_PAPVD 361 25 -
FLRHTEEFQLAFILQLCK VL1_HPV41 394 23 -

Motif 11 width=24
Element Seqn Id St Int Rpt
FWEVNLKEKFSADLDQFPLGRKFL O00530 472 65 -
FWEVNLKEKFSADLDQFPLGRKFL O92282 446 65 -
FWEVNLKEKFSADLDQFPLGRKFL Q81015 446 65 -
FWEVNLKEKFSADLDQFPLGRKFL Q81017 447 65 -
FWEVNLKEKFSADLDQFPLGRKFL VL1_HPV31 447 65 -
FWEVNLKEKFSADLDQFPLGRKFL VL1_HPV16 472 65 -
FWEINLKEKFSADLDQFPLGRKFL O90730 475 65 -
FWEVDLKEKFSADLDQFPLGRKFL VL1_HPV35 444 65 -
FWEVDLKEKFSADLDQFPLGRKFL VL1_HPV52 476 65 -
FWEVDLKDRFSLDLSQFPLGRKFL VL1_HPV28 445 65 -
FWEVDLKEKFSADLDQFPLGRKFL VL1_HPV33 445 65 -
FWEVDLKEKFSADLDQFPLGRKFL VL1_RHPV1 444 65 -
FWEVNLKEKFSADLDQFPLGRKFL VL1_HPV58 471 65 -
FWDVDLKDRFSLDLSQFPLGRKFL Q81958 446 65 -
FWDVDLKDRFSLDLSQFPLGRKFL VL1_HPV10 474 65 -
FWDVDLKDRFTLDLSQFPLGRKFL VL1_HPV29 447 65 -
FWDVDLKDRFSLDLSQFPLGRKFL Q81961 447 65 -
FWDVDLKDRFSLDLSQFPLGRKFL VL1_HPV03 475 65 -
FWDVNLQDSFSADLDQFPLGRKFL VL1_HPV30 452 65 -
FWEVNLSEKFSTDLDQFPLGRKFL VL1_HPV42 445 65 -
FWEVNLKEKFSSELDQYPLGRKFL VL1_HPV13 441 65 -
FWPVDLKERFSADLDQFPLGRKFL Q81971 447 65 -
FWDVDLKDRFTLDLSQFPLGRKFL O56951 509 65 -
FWEVNLKEKFSSELDQYPLGRKFL VL1_HPV6A 441 65 -
FWTVDLKERFSSDLDQFPLGRKFL VL1_HPV54 440 66 -
FWEVNLKEKFSSELDQFPLGRKFL VL1_HPV11 442 65 -
FWEVNLKEKFSSELDQYPLGRKFL Q98003 469 65 -
FWEVNLQNSFSADLDQFPLGRKFL VL1_HPV53 443 65 -
FWEVDLREKFSSELDQYPLGRKFL VL1_HPV55 443 65 -
FWDVDLTERLSLDLDQYSLGRKFL VL1_HPV21 464 65 -
FWEVDLREKFSSELDQYPLGRKFL VL1_HPV44 443 65 -
FWNVDLREKFSLELDQFPLGRKFL VL1_HPV39 446 65 -
FWEVNLSEKFSSDLDQFPLGRKFL VL1_HPV32 445 65 -
FWTVDLKDKFSTDLDQFPLGRKFL Q82003 477 66 -
FWTVDLKDKFSTDLDQFPLGRKFL Q82004 449 66 -
FWNVDLTERLSLDLDQYSLGRKFL VL1_HPV14 464 65 -
FWDVDLTERLSLDLDQYSLGRKFL VL1_HPV25 463 65 -
FWEVNLQDSFSADLDQFPLGRKFL VL1_HPV66 444 65 -
FWDVNLQDSFSTDLDQFPLGRKFL VL1_HPV56 479 65 -
FWDVDLKEKFSAELDQFPLGRKFL Q82010 446 65 -
FWEVNLKEKFSSELDQYPLGRKFL VL1_PCPV1 444 65 -
FWDVDLKEKFSIDLDQFPLGRKFM VL1_HPV26 447 65 -
FWNVNLKEKFSSELDQFPLGRKFL VL1_HPVME 447 65 -
FWNVDLSERLSLDLDQYALGRKFL VL1_HPV19 492 65 -
FWQVDLTEKLSLDLDQYSLGRKFL O56945 457 65 -
FWDVDLSESFSMDLDQFPLGRKFL P89427 457 65 -
FWDVDLSESFSMDLDQFPLGRKFL VL1_HPV57 457 65 -
FWTVDLKEKFSSDLDQYPLGRKFL VL1_HPV45 476 65 -
FWNVDLKEKFSTELDQFPLGRKFL VL1_HPV70 445 65 -
FWEVNLKEKFSSELEQYPLGRKFL O37391 444 65 -
FWNVNLTEKLSLDLDQYPLGRKFI VL1_HPV17 457 65 -
FWNVDLKEKFSSELDQFPLGRKFL VL1_HPV68 447 65 -
FWPVDLTEKLSLDLDQYSLGRKFL O56939 457 65 -
FWNVDLTERLSLDLDQYSLGRKFL VL1_HPV08 461 65 -
FWTVDLRDKFSTDLDQFPLGRKFL VL1_HPV61 448 66 -
FWDVDLSESFSMDLDQFPLGRKFL VL1_HPV2A 456 65 -
FWNVDLSERLSLELDQYSLGRKFL VL1_HPV20 462 65 -
FWDVDLTERLSLDLDQYSLGRKFL VL1_HPV5B 471 65 -
FWEVDLKEKFSAELDQFALGRKFL VL1_HPV34 471 65 -
FWNVDMTEKLSLDLDQYPLGRKFL VL1_HPV38 456 65 -
FWDVDLRESFSMDLDQFPLGRKFL VL1_HPV27 551 65 -
FWDVDMTERLSLDLDQYSLGRKFL VL1_HPV47 460 65 -
FWNVDLSERLSLELDQYSLGRKFL VL1_HPV24 464 65 -
FWDVDLTERLSLDLDQYSLGRKFL VL1_HPV05 462 65 -
FWNVDLKEKFSLDLDQYPLGRKFL VL1_HPV18 508 65 -
FWTVDMTERLSLDLDQYSLGRKFL VL1_HPV12 462 65 -
FWNVDLTERLSLDLDQYSLGRKFL O12670 464 65 -
FWEVNLTEKFSSQLDQFPLGRKFL VL1_HPV07 445 65 -
FWKVDLTERLSLDLDQYPLGRKFL VL1_HPV09 457 65 -
FWDVDLTERLSLDLDQYSLGRKFL VL1_HPV36 462 65 -
FWNVDLTEKLSLDLDQYPLGRKFI VL1_HPV37 457 65 -
FWDVNLTERFSSQLDQFPLGRKFL VL1_HPV40 445 65 -
FWTVDLTEKLSLDLDQYSLGRKFL VL1_HPV49 457 65 -
FWNVDLTEKLSLDLDQYPLGRKFI O56958 457 65 -
FWNVDLTERLSLDLDQYSLGRKFL P88804 462 65 -
FWNVDLTEKLSLDLDQYPLGRKFI VL1_HPV15 457 65 -
FWDVDLKERFSLDLDQFALGRKFL VL1_HPV51 446 65 -
FWNVDMSEKLSLDLDQYPLGRKFL VL1_HPV22 452 65 -
FWNVDMTEKLSLDLDQYPLGRKFL VL1_HPV23 452 65 -
FWDVDLTERFSAQLTQFPLGRKFV O91953 445 65 -
FWEVDLKDKMTEQLDQTPLGRKFL VL1_COPV 449 64 -
FWEVDLSEKLSDQLDQYPLGRKFL O57126 454 65 -
FWEVDLSEKLSDQLDQYPLGRKFL VL1_CRPVK 452 65 -
FWDVDLSERMSEQLDQFPLGRKFL VL1_HPV63 451 65 -
FWGVDLTERFSSELSQFSLGRRFL VL1_HPV65 457 65 -
FWVVDLSERFSSELSQFSLGRRFL VL1_HPV04 457 65 -
FWEVDLTERMSEQLDQFPLGRKFL VL1_HPV1A 453 66 -
FWNVNLTEKFSSELDQYALGRKFL VL1_HPV50 463 65 -
FWNIDLTERLTADLDQFSLGRKFL Q84359 475 64 -
FWNIDLKEKLSLDLDQFPLGRRFL VL1_BPV1 443 64 -
FWEVNLKERLSLDLDQFPLGRRFL VL1_PAPVE 446 65 -
FWTIDLQERFSNELSQFSLGKRYL VL1_HPV60 455 65 -
FWSIDLKEKLSLDLDQFPLGRRFL VL1_BPV2 443 64 -
FWSIDLKEKLSLDLDQFPLGRRFL Q96640 443 64 -
FWTLDMTERFSSDLSQFSLGRKFL VL1_HPV48 459 64 -
FWDVDLTEKFTTNLNQHSLVRKFL VL1_BPV4 449 64 -
FWKIDLKEKFSLDIDQFPLGRRFL P89030 442 64 -
FWKIDLKEKFSLDIDQFPLGRRFL P89031 442 64 -
FWEVNLKEKLSLDLDQFPLGRLVL VL1_PAPVD 444 65 -
FWEVDLRDRMTEQLDQTPLGRKFL VL1_HPV41 477 65 -