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PR00808

Identifier
AMLASEINHBTR  [View Relations]  [View Alignment]  
Accession
PR00808
No. of Motifs
6
Creation Date
21-MAR-1998  (UPDATE 12-JUN-1999)
Title
Cereal trypsin/alpha-amylase inhibitor family signature
Database References
PRINTS; PR00809 RAGALLERGEN
PROSITE; PS00426 CEREAL_TRYP_AMYL_INH
BLOCKS; BL00426
PFAM; PF00234 tryp_alpha_amyl
INTERPRO; IPR001768
PDB; 1BIP; 1JFO
SCOP; 1BIP
CATH; 1BIP
Literature References
1. GAUTIER, M.-F., ALARY, R. AND JOUDIRER, P.
Cloning and characterization of a cDNA-encoding the wheat (triticum-durum
desf) cm16 protein.
PLANT MOL.BIOL. 14(3) 313-322 (1990).
 
2. STROBL, S., MUHLHAHN, P., BERNSTEIN, R., WILTSCHECK, R., MASKOS, K.,
WUNDERLICH, M., HUBER, R., GLOCKSHUBER, R. AND HOLAK, T.A.
Determination of the three-dimensional structure of the bifunctional
alpha-amylase/trypsin inhibitor from ragi seeds by NMR spectroscopy. 
BIOCHEMISTRY 34 8281-8293 (1995). 
 
3. ADACHI, T., IZUMI, H., YAMADA, T., TANAKA, K., TAKEUCHI, S., 
NAKAMURA, R. AND MATSUDA, T.
Gene structure and expression of rice seed allergenic proteins belonging
to the alpha-amylase trypsin-inhibitor family.
PLANT MOL.BIOL. 21(2) 239-248 (1993).
 
4. IZUMI, H., ADACHI, T., FUJII, N., MATSUDA, T., NAKAMURA, R., TANAKA, K.,
URISU, A. AND KUROSAWA, Y.
Nucleotide sequence of a cDNA clone encoding a major allergenic protein
in rice seeds. homology of the deduced amino acid sequence with members
of alpha-amylase/trypsin inhibitor family. 
FEBS LETT. 302 213-216 (1992). 

Documentation
Seeds of cereals contain a variety of serine proteases and alpha-amylase
inhibitors. These inhibitors can be grouped into families based on structural
similarities. Trypsin/alpha-amylase inhibitors are specific to trypsin or to
alpha-amylase, and a few are bifunctional. The proteins contain ~120 amino
acids, including 10 cysteine residues, all of which are involved in
disulphide bond formation [1], as represented schematically below:
 
                      +----------------------------+
          +----------+|   +-+                      |
          |          ||   | |                      |
 xxCxxxxxxCxxxCxxxxxxCCxxxCxCxxxxxxxxxxxxxCxxxxxxxxCxxxxxxxCxxxx
   |          |                           |                |
   |          +---------------------------+                |
   +-------------------------------------------------------+
 
 
The 3D structure of the bifunctional alpha-amylase/trypsin inhibitor (RBI)
from seeds of ragi (Eleusine coracana) has been determined in solution using
multidimensional 1H and 15N NMR spectroscopy [2]. The inhibitor forms a 
globular 4-helix motif with a simple "up-and-down" topology, and includes
a short anti-parallel beta-sheet [2]. 
 
This family also includes various rice seed allergenic proteins [3,4].
 
AMLASEINHBTR is a 4-element fingerprint that provides a signature for the
cereal trypsin/alpha-amylase inhibitor protein family. The fingerprint was
derived from an initial alignment of 14 sequences: the motifs were drawn
from short conserved regions spanning the full length of the mature protein
- motifs 1 and 2 span the region encoded by PROSITE pattern
CEREAL_TRYP_AMYL_INH (PS00426), which includes the first 3 Cys residues;
motif 2 encompasses the first helix; motif 3 encodes the second helix 
and includes the adjacent pair of cysteines; motif 4 includes the following
Cys pair and includes the first turn of helix 3; motif 5 spans the N-terminal 
half of helix 4 and includes the eighth Cys; and motif 6 includes the ninth
Cys. Three iterations on OWL30.0 were required to reach convergence, at 
which point a true set comprising 39 sequences was identified. Several
partial matches were also found, all of which are fragments, or members of
the alpha/beta-gliadin family, most of which match motifs 2 and 4.
 
An update on SPTR37_9f identified a true set of 34 sequences, and 13
partial matches.
Summary Information
  34 codes involving  6 elements
0 codes involving 5 elements
0 codes involving 4 elements
6 codes involving 3 elements
7 codes involving 2 elements
Composite Feature Index
6343434343434
5000000
4000000
3161505
2140504
123456
True Positives
IA01_WHEAT    IA02_WHEAT    IA03_WHEAT    IA16_WHEAT    
IAA1_WHEAT IAA2_HORVU IAA2_WHEAT IAA4_SORBI
IAA5_WHEAT IAAA_HORVU IAAB_HORVU IAAD_HORVU
IAAE_HORVU IAAT_ELECO IAA_HORVU ITRF_MAIZE
O23982 O24000 O49861 O49862
O49863 O49864 O49865 O49867
O49956 P93602 Q40652 Q40654
Q40655 Q41540 RA05_ORYSA RA14_ORYSA
RA17_ORYSA RAG2_ORYSA
True Positive Partials
Codes involving 3 elements
GDA2_WHEAT GDA3_WHEAT GDA7_WHEAT IAA5_SORBI
Q41529 Q41546
Codes involving 2 elements
GDA4_WHEAT GDA5_WHEAT GDA6_WHEAT GDA9_WHEAT
O49178 Q41545 Q41632
Sequence Titles
IA01_WHEAT  ALPHA-AMYLASE/TRYPSIN INHIBITOR CM1 PRECURSOR (CHLOROFORM/METHANOL- SOLUBLE PROTEIN CM1) - TRITICUM AESTIVUM (WHEAT). 
IA02_WHEAT ALPHA-AMYLASE/TRYPSIN INHIBITOR CM2 PRECURSOR (CHLOROFORM/METHANOL- SOLUBLE PROTEIN CM2) - TRITICUM AESTIVUM (WHEAT).
IA03_WHEAT ALPHA-AMYLASE/TRYPSIN INHIBITOR CM3 PRECURSOR (CHLOROFORM/METHANOL- SOLUBLE PROTEIN CM3) - TRITICUM AESTIVUM (WHEAT).
IA16_WHEAT ALPHA-AMYLASE/TRYPSIN INHIBITOR CM16 PRECURSOR (CHLOROFORM/METHANOL- SOLUBLE PROTEIN CM16) - TRITICUM AESTIVUM (WHEAT).
IAA1_WHEAT ALPHA-AMYLASE INHIBITOR 0.19 (0.19 AI) - TRITICUM AESTIVUM (WHEAT).
IAA2_HORVU ALPHA-AMYLASE INHIBITOR BDAI-I PRECURSOR - HORDEUM VULGARE (BARLEY).
IAA2_WHEAT ALPHA-AMYLASE INHIBITOR 0.28 (CIII) (WMAI-1) - TRITICUM AESTIVUM (WHEAT).
IAA4_SORBI ALPHA-AMYLASE INHIBITOR 4 (SI ALPHA-4) - SORGHUM BICOLOR MILO (SORGHUM).
IAA5_WHEAT ALPHA-AMYLASE INHIBITOR 0.53 - TRITICUM AESTIVUM (WHEAT).
IAAA_HORVU ALPHA-AMYLASE/TRYPSIN INHIBITOR CMA PRECURSOR (CHLOROFORM/METHANOL- SOLUBLE PROTEIN CMA) - HORDEUM VULGARE (BARLEY).
IAAB_HORVU ALPHA-AMYLASE/TRYPSIN INHIBITOR CMB PRECURSOR (CHLOROFORM/METHANOL- SOLUBLE PROTEIN CMB) - HORDEUM VULGARE (BARLEY).
IAAD_HORVU ALPHA-AMYLASE/TRYPSIN INHIBITOR CMD PRECURSOR (CHLOROFORM/METHANOL- SOLUBLE PROTEIN CMD) - HORDEUM VULGARE (BARLEY).
IAAE_HORVU TRYPSIN INHIBITOR CME PRECURSOR (CHLOROFORM/METHANOL-SOLUBLE PROTEIN CME) - HORDEUM VULGARE (BARLEY).
IAAT_ELECO ALPHA-AMYLASE/TRYPSIN INHIBITOR (RBI) (RATI) - ELEUSINE CORACANA (INDIAN FINGER MILLET) (RAGI).
IAA_HORVU ALPHA-AMYLASE/TRYPSIN INHIBITOR PRECURSOR - HORDEUM VULGARE (BARLEY).
ITRF_MAIZE TRYPSIN/FACTOR XIIA INHIBITOR PRECURSOR (HAGEMAN FACTOR INHIBITOR) (CHFI) - ZEA MAYS (MAIZE).
O23982 CMD SUBUNIT OF TETRAMERIC ALPHA-AMYLASE INHIBITOR PRECURSOR - HORDEUM VULGARE (BARLEY).
O24000 CMD3 PROTEIN PRECURSOR - HORDEUM VULGARE (BARLEY).
O49861 BTI-CME2.1 PROTEIN PRECURSOR - HORDEUM SPONTANEUM (BARLEY).
O49862 BTI-CME2.2 PROTEIN PRECURSOR - HORDEUM SPONTANEUM (BARLEY).
O49863 BTI-CME4 PROTEIN PRECURSOR - HORDEUM SPONTANEUM (BARLEY).
O49864 BTI-CME1 PRECURSOR - HORDEUM VULGARE (BARLEY).
O49865 BTI-CME3.1 PROTEIN PRECURSOR - HORDEUM VULGARE (BARLEY).
O49867 BTI-CME2.2 PROTEIN PRECURSOR - HORDEUM VULGARE (BARLEY).
O49956 MONOMERIC ALPHA-AMYLASE INHIBITOR PRECURSOR - TRITICUM AESTIVUM (WHEAT).
P93602 PUP88 PROTEIN, MEMBER OF TRYPSIN/A-AMYLASE INHIBITORS FAMILY FROM CEREALS PRECURSOR - TRITICUM AESTIVUM (WHEAT).
Q40652 ALLERGENIC PROTEIN - ORYZA SATIVA (RICE).
Q40654 ALLERGENIC PROTEIN - ORYZA SATIVA (RICE).
Q40655 ALLERGENIC PROTEIN - ORYZA SATIVA (RICE).
Q41540 CM 17 PROTEIN PRECURSOR - TRITICUM AESTIVUM (WHEAT).
RA05_ORYSA SEED ALLERGENIC PROTEIN RA5 PRECURSOR - ORYZA SATIVA (RICE).
RA14_ORYSA SEED ALLERGENIC PROTEIN RA14 PRECURSOR - ORYZA SATIVA (RICE).
RA17_ORYSA SEED ALLERGENIC PROTEIN RA17 PRECURSOR - ORYZA SATIVA (RICE).
RAG2_ORYSA SEED ALLERGENIC PROTEIN RAG2 PRECURSOR - ORYZA SATIVA (RICE).

GDA2_WHEAT ALPHA/BETA-GLIADIN A-II PRECURSOR (PROLAMIN) - TRITICUM AESTIVUM (WHEAT).
GDA3_WHEAT ALPHA/BETA-GLIADIN A-III PRECURSOR (PROLAMIN) - TRITICUM AESTIVUM (WHEAT).
GDA7_WHEAT ALPHA/BETA-GLIADIN CLONE PW8142 PRECURSOR (PROLAMIN) - TRITICUM AESTIVUM (WHEAT).
IAA5_SORBI ALPHA-AMYLASE INHIBITOR 5 (SI ALPHA-5) - SORGHUM BICOLOR MILO (SORGHUM).
Q41529 ALPHA-GLIADIN STORAGE PROTEIN - TRITICUM AESTIVUM (WHEAT).
Q41546 ALPHA/BETA-GLIADIN STORAGE PROTEIN PRECURSOR - TRITICUM AESTIVUM (WHEAT).

GDA4_WHEAT ALPHA/BETA-GLIADIN A-IV PRECURSOR (PROLAMIN) - TRITICUM AESTIVUM (WHEAT).
GDA5_WHEAT ALPHA/BETA-GLIADIN A-V PRECURSOR (PROLAMIN) - TRITICUM AESTIVUM (WHEAT).
GDA6_WHEAT ALPHA/BETA-GLIADIN CLONE PW1215 PRECURSOR (PROLAMIN) - TRITICUM AESTIVUM (WHEAT).
GDA9_WHEAT ALPHA/BETA-GLIADIN MM1 PRECURSOR (PROLAMIN) - TRITICUM AESTIVUM (WHEAT).
O49178 ALLERGENIC PROTEIN - ORYZA SATIVA (RICE).
Q41545 (T. AESTIVUM) ALPHA-TYPE GLIADIN PRECURSOR - TRITICUM AESTIVUM (WHEAT).
Q41632 ALPHA/BETA-TYPE GLIADIN - TRITICUM URARTU.
Scan History
OWL30_0    3  100  NSINGLE    
SPTR37_9f 2 60 NSINGLE
Initial Motifs
Motif 1  width=15
Element Seqn Id St Int Rpt
CVPGVAFRTNLLPHC IA03_WHEAT 29 29 -
CQPGMGYPMYSLPRC RA14_ORYSA 41 41 -
CQPGMGYPMYSLPRC RAG2_ORYSA 41 41 -
CRPGISYPTYSLPQC RA17_ORYSA 39 39 -
CQPGMGYPMYSLPRC S59922 41 41 -
CQPGMGYPMYPLPRC S59925 42 42 -
CQPGMGYPMYSLPRC S59923 34 34 -
CWPGMGYPVYPFPRC IAA1_HORVU 20 20 -
CDPEMGHKVSPLTRC IAA2_HORVU 37 37 -
CYPGQAFQVPALPGC IAA5_WHEAT 6 6 -
CNPATGYKVSALTGC IAA2_WHEAT 7 7 -
CYPGQAFQVPALPAC IAA1_WHEAT 6 6 -

Motif 2 width=10
Element Seqn Id St Int Rpt
CRALVKLECV IAA2_HORVU 51 -1 -
CRPLLKLQCN IAA5_WHEAT 20 -1 -
CRAMVKLQCV IAA2_WHEAT 21 -1 -
CRPLLRLQCN IAA1_WHEAT 20 -1 -
CRALVKRQCV S59925 56 -1 -
CRAVVKRQCV S59922 55 -1 -
CRAVVKRQCV S59923 48 -1 -
CRALVKSQCA IAA1_HORVU 34 -1 -
CRTLVRRQCV RA17_ORYSA 53 -1 -
CRAVVKRQCV RAG2_ORYSA 55 -1 -
CRAVVKRQCV RA14_ORYSA 55 -1 -
CRDYVLQQTC IA03_WHEAT 43 -1 -

Motif 3 width=12
Element Seqn Id St Int Rpt
EQLRQDCCRQLA S59922 75 10 -
EQVRRDCCRQLA S59925 74 8 -
EQLRQDCCRQLA S59923 68 10 -
ESIQKDCCRQIA IAA1_HORVU 49 5 -
YLAKLYCCQELA IA03_WHEAT 77 24 -
EQLAQDCCRELA RA14_ORYSA 74 9 -
EQLRQDCCRQLA RAG2_ORYSA 75 10 -
EQVWQDCCRQLA RA17_ORYSA 71 8 -
EAVLRDCCQQLA IAA1_WHEAT 35 5 -
EAVLRDCCQQLA IAA2_WHEAT 36 5 -
EAVLRDCCQQLA IAA5_WHEAT 35 5 -
EDVLRDCCQEVA IAA2_HORVU 66 5 -

Motif 4 width=10
Element Seqn Id St Int Rpt
GDEWCICGAL IAA1_HORVU 63 2 -
DDSWCRCSAL S59923 82 2 -
DDSWCRCSAL S59922 89 2 -
DDSWCRCEAI S59925 88 2 -
ISQQCRCEAL IA03_WHEAT 90 1 -
DDSWCRCSAL RA14_ORYSA 88 2 -
DDSWCRCSAL RAG2_ORYSA 89 2 -
DDGWCRCGAL RA17_ORYSA 85 2 -
ISEWCRCGAL IAA1_WHEAT 48 1 -
NNEWCRCGDL IAA2_WHEAT 50 2 -
ISEWPRCGAL IAA5_WHEAT 48 1 -
SNEWCRCGDL IAA2_HORVU 80 2 -

Motif 5 width=12
Element Seqn Id St Int Rpt
TGAFPRCRREVV IAA1_WHEAT 77 19 -
KEVLPGCRKEVM IAA2_WHEAT 76 16 -
TGAFPSCRREVV IAA5_WHEAT 77 19 -
EEVFPGCQKDVM IAA2_HORVU 107 17 -
AEVFPGCRTEVM IAA1_HORVU 95 22 -
AEVFPGCRRGDL S59923 112 20 -
AEVFPGCRRGDL S59922 119 20 -
SEVFRGCRRGDL S59925 118 20 -
LIDLPGCPREMQ IA03_WHEAT 124 24 -
AEVFPGCRRGDL RA14_ORYSA 118 20 -
AEVFPGCRRGDL RAG2_ORYSA 119 20 -
AEVFPGCRRGDL RA17_ORYSA 115 20 -

Motif 6 width=16
Element Seqn Id St Int Rpt
LLVAGVPALCNVPIPN IAA2_HORVU 120 1 -
RAAASLPAFCNVDIPN S59923 125 1 -
RAAASLPAFCNVDIPN S59922 132 1 -
RAAASLPAFCNVDIPN S59925 131 1 -
VRLLVAPGQCNLATIH IA03_WHEAT 139 3 -
RAAASLPAFCNVDIPN RA14_ORYSA 131 1 -
RAAASLPAFCNVDIPN RAG2_ORYSA 132 1 -
RAAASLPAFCNVDIPN RA17_ORYSA 128 1 -
LTAASITAVCRLPIVV IAA1_WHEAT 90 1 -
LTAASVPEVCKVPIPN IAA2_WHEAT 89 1 -
LTAASITAVCRLPIVV IAA5_WHEAT 90 1 -
RAVASLPAVCNQYIPN IAA1_HORVU 108 1 -
Final Motifs
Motif 1  width=15
Element Seqn Id St Int Rpt
CAPGDALPHNPLRAC O49864 29 29 -
CAPGDALPHNPLRAC O49865 29 29 -
CAPGDALPHNPLRAC IAAE_HORVU 29 29 -
CAPGDELPHNPLRAC O49861 29 29 -
CAPGDALPANPLRAC O49863 29 29 -
CSPGVAFPTNLLGHC O23982 32 32 -
CSPGVAFPTNLLGHC IAAD_HORVU 32 32 -
CAPGDALPANPLRAC O49862 29 29 -
CVPGWAIPHNPLPSC ITRF_MAIZE 34 34 -
CSPGVAFPTNLHGHC O24000 32 32 -
CVPGVAFRTNLLPHC IA03_WHEAT 29 29 -
CAPGDALPANPLRAC O49867 29 29 -
CTPWTATPITPLPSC IAAB_HORVU 30 30 -
CTPWMSTLITPLPSC IA16_WHEAT 30 30 -
CYPGMGLPSNPLEGC IA02_WHEAT 30 30 -
CYAGMGLPSNPLEGC IAAA_HORVU 30 30 -
CTPWTSTLITPLPSC Q41540 30 30 -
CIPGMAIPHNPLDSC IAAT_ELECO 6 6 -
CQPGMGYPMYSLPRC RA14_ORYSA 41 41 -
CQPGMGYPMYSLPRC Q40652 41 41 -
CQPGMGYPMYSLPRC RAG2_ORYSA 41 41 -
CYAGMGLPINPLEGC IA01_WHEAT 30 30 -
CQPGVAFPHNALATC P93602 32 32 -
CQPGMGYPMYPLPRC Q40655 42 42 -
CQPGIGYPTYPLPRC Q40654 41 41 -
CQPGMGYPMYSLPRC RA05_ORYSA 41 41 -
CRPGISYPTYSLPQC RA17_ORYSA 39 39 -
CQLGVDFPHNPLATC IAA_HORVU 33 33 -
CAPGLAIPAPPLPTC IAA4_SORBI 7 7 -
CYPGQAFQVPALPAC IAA1_WHEAT 6 6 -
CDPATGYKVSALTGC O49956 37 37 -
CNPATGYKVSALTGC IAA2_WHEAT 7 7 -
CYPGQAFQVPALPGC IAA5_WHEAT 6 6 -
CDPEMGHKVSPLTRC IAA2_HORVU 37 37 -

Motif 2 width=10
Element Seqn Id St Int Rpt
CRTYVVSQIC O49864 43 -1 -
CRTYVVSQIC O49865 43 -1 -
CRTYVVSQIC IAAE_HORVU 43 -1 -
CRTYVVSQVC O49861 43 -1 -
CRTYVVSQIC O49863 43 -1 -
CRDYVLQQTC O23982 46 -1 -
CRDYVLQQTC IAAD_HORVU 46 -1 -
CRTYVVSQIC O49862 43 -1 -
CRWYVTSRTC ITRF_MAIZE 48 -1 -
CRDYVLQQTC O24000 46 -1 -
CRDYVLQQTC IA03_WHEAT 43 -1 -
CRTYVVSQIC O49867 43 -1 -
CRDYVEQQAC IAAB_HORVU 44 -1 -
CRDYVEQQAC IA16_WHEAT 44 -1 -
CREYVAQQTC IA02_WHEAT 44 -1 -
CREYVAQQTC IAAA_HORVU 44 -1 -
CRNYVEEQAC Q41540 44 -1 -
CRWYVSTRTC IAAT_ELECO 20 -1 -
CRAVVKRQCV RA14_ORYSA 55 -1 -
CRAVVKRQCV Q40652 55 -1 -
CRAVVKRQCV RAG2_ORYSA 55 -1 -
CREYVAQQTC IA01_WHEAT 44 -1 -
CHTYVIKRVC P93602 46 -1 -
CRALVKRQCV Q40655 56 -1 -
CRAFVKRQCV Q40654 55 -1 -
CRALVKRQCR RA05_ORYSA 55 -1 -
CRTLVRRQCV RA17_ORYSA 53 -1 -
CHTYVIKRVC IAA_HORVU 47 -1 -
CRTFARPRTC IAA4_SORBI 21 -1 -
CRPLLRLQCN IAA1_WHEAT 20 -1 -
CRAMVKLQCV O49956 51 -1 -
CRAMVKLQCV IAA2_WHEAT 21 -1 -
CRPLLKLQCN IAA5_WHEAT 20 -1 -
CRALVKLECV IAA2_HORVU 51 -1 -

Motif 3 width=12
Element Seqn Id St Int Rpt
SDMKRRCCDELS O49864 61 8 -
SDMKRRCCDELS O49865 61 8 -
SDMKRRCCDELS IAAE_HORVU 61 8 -
SDMKRRCCDELS O49861 61 8 -
WDMKRRCCDELS O49863 61 8 -
YLAKLYCCQELA O23982 80 24 -
YLAKLYCCQELA IAAD_HORVU 80 24 -
WDMKRRCCDELS O49862 61 8 -
PELKRRCCRELA ITRF_MAIZE 66 8 -
YLAKLYCCQELA O24000 80 24 -
YLAKLYCCQELA IA03_WHEAT 77 24 -
WDMKRRCCDELS O49867 61 8 -
YLAKQQCCGELA IAAB_HORVU 62 8 -
YLAKQQCCGELA IA16_WHEAT 62 8 -
NTPRDRCCKELY IA02_WHEAT 68 14 -
DTPKDRCCQELD IAAA_HORVU 68 14 -
YLAKQECCEQLA Q41540 62 8 -
QEMKARCCRQLE IAAT_ELECO 38 8 -
EQLAQDCCRELA RA14_ORYSA 74 9 -
EQLRQDCCRQLA Q40652 75 10 -
EQLRQDCCRQLA RAG2_ORYSA 75 10 -
NTPRDRCCKELY IA01_WHEAT 68 14 -
MLVKERCCRELA P93602 63 7 -
EQVRRDCCRQLA Q40655 74 8 -
EQVRRGCCRQLA Q40654 71 6 -
EQVRRDCCRQLA RA05_ORYSA 71 6 -
EQVWQDCCRQLA RA17_ORYSA 71 8 -
MLVKERCCRELA IAA_HORVU 64 7 -
PVLKQRCCRELA IAA4_SORBI 43 12 -
EAVLRDCCQQLA IAA1_WHEAT 35 5 -
EAVLRDCCQQLA O49956 66 5 -
EAVLRDCCQQLA IAA2_WHEAT 36 5 -
EAVLRDCCQQLA IAA5_WHEAT 35 5 -
EDVLRDCCQEVA IAA2_HORVU 66 5 -

Motif 4 width=10
Element Seqn Id St Int Rpt
IPAYCRCEAL O49864 74 1 -
IPAYCRCEAL O49865 74 1 -
IPAYCRCEAL IAAE_HORVU 74 1 -
IPAYCRCEAL O49861 74 1 -
IPAYCRCAAL O49863 74 1 -
IPQQCRCEAL O23982 93 1 -
IPQQCRCEAL IAAD_HORVU 93 1 -
IPAYCRCEAL O49862 74 1 -
IPAYCRCTAL ITRF_MAIZE 79 1 -
IPQQCRCEAL O24000 93 1 -
ISQQCRCEAL IA03_WHEAT 90 1 -
IPAYCRCEAL O49867 74 1 -
IPQQCRCQAL IAAB_HORVU 75 1 -
IPQQCRCQAL IA16_WHEAT 75 1 -
ASQHCRCEAV IA02_WHEAT 81 1 -
APQHCRCEAV IAAA_HORVU 81 1 -
IPQQCRCQAL Q41540 75 1 -
IPAYCRCEAV IAAT_ELECO 51 1 -
DDSWCRCSAL RA14_ORYSA 88 2 -
DDSWCRCSAL Q40652 89 2 -
DDSWCRCSAL RAG2_ORYSA 89 2 -
ASQHCRCEAV IA01_WHEAT 81 1 -
VPDYCRCEAL P93602 76 1 -
DDSWCRCEAI Q40655 88 2 -
DSSWCRCDAL Q40654 85 2 -
DDSWCRCEAI RA05_ORYSA 85 2 -
DDGWCRCGAL RA17_ORYSA 85 2 -
VPDHCRCEAL IAA_HORVU 77 1 -
VPSRCRCAAL IAA4_SORBI 56 1 -
ISEWCRCGAL IAA1_WHEAT 48 1 -
NNEWCRCGDL O49956 80 2 -
NNEWCRCGDL IAA2_WHEAT 50 2 -
ISEWPRCGAL IAA5_WHEAT 48 1 -
SNEWCRCGDL IAA2_HORVU 80 2 -

Motif 5 width=12
Element Seqn Id St Int Rpt
FKDTPNCPRERQ O49864 102 18 -
FKDTPNCPRERQ O49865 102 18 -
FKDSPNCPRERQ IAAE_HORVU 102 18 -
FKDSPNCPRERQ O49861 102 18 -
FKDMPNCPRERQ O49863 101 17 -
LMDLPGCPREMQ O23982 127 24 -
LMDLPGCPREMQ IAAD_HORVU 127 24 -
FKDMPNCPRVMQ O49862 101 17 -
LEDLPGCPREVQ ITRF_MAIZE 108 19 -
LMDLPGCPREMQ O24000 127 24 -
LIDLPGCPREMQ IA03_WHEAT 124 24 -
FKDMPNSPRVMQ O49867 101 17 -
LMELPGCPREVQ IAAB_HORVU 99 14 -
LMELPGCPREVQ IA16_WHEAT 99 14 -
LKDLPGCPREPQ IA02_WHEAT 105 14 -
LKDLPGCPKEPQ IAAA_HORVU 105 14 -
LMELPGCPREVQ Q41540 99 14 -
LQDLPGCPRQVQ IAAT_ELECO 79 18 -
AEVFPGCRRGDL RA14_ORYSA 118 20 -
AEVFPGCRRGDL Q40652 119 20 -
AEVFPGCRRGDL RAG2_ORYSA 119 20 -
LKDLPGCPREPQ IA01_WHEAT 105 14 -
LGDRRDCPREAQ P93602 104 18 -
SEVFRGCRRGDL Q40655 118 20 -
AEVFRGCRRGDI Q40654 115 20 -
SEVFRGCRRGDL RA05_ORYSA 115 20 -
AEVFPGCRRGDL RA17_ORYSA 115 20 -
LGDRRDCPREEQ IAA_HORVU 105 18 -
LQDFRGCTREMQ IAA4_SORBI 76 10 -
TGAFPRCRREVV IAA1_WHEAT 77 19 -
KEVLPGCRKEVM O49956 106 16 -
KEVLPGCRKEVM IAA2_WHEAT 76 16 -
TGAFPSCRREVV IAA5_WHEAT 77 19 -
EEVFPGCQKDVM IAA2_HORVU 107 17 -

Motif 6 width=16
Element Seqn Id St Int Rpt
AANLVTPQECNLWTIH O49864 117 3 -
AANLVTPQECNLWTIH O49865 117 3 -
AANLVTPQECNLGTIH IAAE_HORVU 117 3 -
AANLVTPQECNLGTIH O49861 117 3 -
AANLVTPQECNLWTIH O49863 116 3 -
VRLLVAPGQCNLATIH O23982 142 3 -
VRLLVAPGQCNLATIH IAAD_HORVU 142 3 -
AANLVNPQECNLWTIH O49862 116 3 -
AATLVTEAECNLATIS ITRF_MAIZE 123 3 -
VRLLVAPGQCNLATIH O24000 142 3 -
VRLLVAPGQCNLATIH IA03_WHEAT 139 3 -
AANLVNPQECNLWTIH O49867 116 3 -
VRILVTPGFCNLTTVH IAAB_HORVU 114 3 -
VRILVTPGYCNLTTVH IA16_WHEAT 114 3 -
AKVLVTPGHCNVMTVH IA02_WHEAT 120 3 -
AKVLVTPGQCNVLTVH IAAA_HORVU 120 3 -
VPILVTPGYCNLTTVH Q41540 114 3 -
APKLVTEVECNLATIH IAAT_ELECO 94 3 -
RAAASLPAFCNVDIPN RA14_ORYSA 131 1 -
RAAASLPAFCNVDIPN Q40652 132 1 -
RAAASLPAFCNVDIPN RAG2_ORYSA 132 1 -
AKVLVTSGHCNVMTVH IA01_WHEAT 120 3 -
AATLVTAAECNLPTVS P93602 119 3 -
RAAASLPAFCNVDIPN Q40655 131 1 -
RAAASLPAFCNVDIPN Q40654 128 1 -
RAAASLPAFCNVDIPN RA05_ORYSA 128 1 -
RAAASLPAFCNVDIPN RA17_ORYSA 128 1 -
AATLVTAAECNLSSVQ IAA_HORVU 120 3 -
VSRLTRAAECNLPTIP IAA4_SORBI 92 4 -
LTAASITAVCRLPIVV IAA1_WHEAT 90 1 -
LTAASVPEVCKVPIPN O49956 119 1 -
LTAASVPEVCKVPIPN IAA2_WHEAT 89 1 -
LTAASITAVCRLPIVV IAA5_WHEAT 90 1 -
LLVAGVPALCNVPIPN IAA2_HORVU 120 1 -