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PR00807

Identifier
AMBALLERGEN  [View Relations]  [View Alignment]  
Accession
PR00807
No. of Motifs
8
Creation Date
13-FEB-1998  (UPDATE 11-JUN-1999)
Title
Pollen allergen Amb family signature
Database References

PFAM; PF00544 pec_lyase
INTERPRO; IPR002022
Literature References
1. ROGERS, B.L., MORGENSTERN, J.P., GRIFFITH, I.J., YU, X.B., COUNSELL, C.M.,
BRAUER, A.W., KING, T.P., GARMAN, R.D. AND KUO, M.C.
Complete sequence of the allergen Amb alpha II. recombinant expression
and reactivity with t cells from ragweed allergic patients. 
J.IMMUNOL. 147 2547-2552 (1991). 
 
2. ROGERS, H.J., HARVEY, A. AND LONSDALE, D.M.
Isolation and characterization of a tobacco gene with homology to pectate 
lyase which is specifically expressed during microsporogenesis. 
PLANT MOL.BIOL. 20 493-502 (1992). 
 
3. HIJIKATA, A., MATSUMOTO, I., KOJIMA, K. AND OGAWA, H.
Antigenicity of the oligosaccharide moiety of the Japanese cedar
INT.ARCH.ALLERGY IMMUNOL. 105 198-202 (1994). 
 
4. WING, R.A., YAMAGUCHI, J., LARABELL, S.K., URSIN, V.M. AND MCCORMICK, S.
Molecular and genetic characterization of two pollen-expressed genes that
have sequence similarity to pectate lyases of the plant pathogen Erwinia. 
PLANT MOL.BIOL. 14 17-28 (1990). 

Documentation
Two of the major allergens in the pollen of short ragweed (Ambrosia 
artemisiifolia) are Amb aI and Amb aII. The primary structure of Amb aII
has been deduced and has been shown to share ~65% sequence identity with
the Amb alpha I multigene family of allergens [1]. Members of the Amb aI/aII
family include tobacco pectate lyase, which is similar to the deduced amino
acid sequences of two pollen-specific pectate lyase genes identified in
tomato [2]; Cry jI, a major allergenic glycoprotein of Cryptomeria japonica 
(Japanese cedar) - the most common pollen allergen in Japan [3]; and P56
and P59, which share sequence similarity with pectate lyases of plant 
pathogenic bacteria [4]. 
 
Pectate lyase is responsible for the eliminative cleavage of pectate,
yielding oligosaccharides with 4-deoxy-alpha-D-mann-4-enuronosyl groups
at their non-reducing ends. The protein is maximally expressed late in
pollen development. It has been suggested that the pollen expression of 
pectate lyase genes might relate to a requirement for pectin degradation
during pollen tube growth [4]. 
 
AMBALLERGEN is an 8-element fingerprint that provides a signature for
the pollen allergen AMB family. The fingerprint was derived from an initial
alignment of 9 sequences: the motifs were drawn from short conserved
regions spanning virtually the full alignment length - motif 5 includes
a putative active site arginine residue. Two iterations on OWL29.6 were
required to reach convergence, at which point a true set comprising 22
sequences was identified. Several partial matches were also found, all of
which are fragments and related pectate lyase sequences that match motifs
4 and 5 (many of these are from the Erwinia/bacterial pectate lyase family).
 
An update on SPTR37_9f identified a true set of 21 sequences, and 21
partial matches.
Summary Information
  21 codes involving  8 elements
0 codes involving 7 elements
1 codes involving 6 elements
0 codes involving 5 elements
0 codes involving 4 elements
1 codes involving 3 elements
19 codes involving 2 elements
Composite Feature Index
82121212121212121
700000000
611111100
500000000
400000000
300011100
20001919000
12345678
True Positives
9612_LYCES    MP11_AMBAR    MP12_AMBAR    MP13_AMBAR    
MP14_AMBAR MPA2_AMBAR O23017 O23665
O24554 O64510 O65388 O65456
O65457 PE56_LYCES PE59_LYCES PEL_LILLO
PEL_TOBAC Q40319 Q43862 Q96385
SBP_CRYJA
True Positive Partials
Codes involving 6 elements
O24416
Codes involving 3 elements
PELD_ERWCH
Codes involving 2 elements
O08454 PEL1_ERWCA PEL2_ERWCA PEL3_ERWCA
PELB_COLGL PELB_ERWCH PELC_ERWCH PELE_ERWCH
PELF_ERWCH PEL_BACSU PEL_EMENI PEL_PSEFL
PEL_PSEMA PEL_PSESL PEL_PSEVI PEL_XANCM
Q04086 Q47467 Q59419
Sequence Titles
9612_LYCES  STYLE DEVELOPMENT-SPECIFIC PROTEIN 9612 PRECURSOR - LYCOPERSICON ESCULENTUM (TOMATO). 
MP11_AMBAR POLLEN ALLERGEN AMB A 1.1 PRECURSOR (ANTIGEN E) (ANTIGEN AMB A I) - AMBROSIA ARTEMISIIFOLIA (SHORT RAGWEED).
MP12_AMBAR POLLEN ALLERGEN AMB A 1.2 PRECURSOR (ANTIGEN E) (ANTIGEN AMB A I) - AMBROSIA ARTEMISIIFOLIA (SHORT RAGWEED).
MP13_AMBAR POLLEN ALLERGEN AMB A 1.3 PRECURSOR (ANTIGEN E) (ANTIGEN AMB A I) - AMBROSIA ARTEMISIIFOLIA (SHORT RAGWEED).
MP14_AMBAR POLLEN ALLERGEN AMB A 1.4 PRECURSOR (ANTIGEN E) (ANTIGEN AMB A I) - AMBROSIA ARTEMISIIFOLIA (SHORT RAGWEED).
MPA2_AMBAR POLLEN ALLERGEN AMB A 2 PRECURSOR (ANTIGEN K) (ANTIGEN AMB A II) - AMBROSIA ARTEMISIIFOLIA (SHORT RAGWEED).
O23017 T1G11.7 PROTEIN - ARABIDOPSIS THALIANA (MOUSE-EAR CRESS).
O23665 PUTATIVE PECTATE LYASE - ARABIDOPSIS THALIANA (MOUSE-EAR CRESS).
O24554 PECTATE LYASE PRECURSOR - ZINNIA ELEGANS.
O64510 PUTATIVE PECTATE LYASE - ARABIDOPSIS THALIANA (MOUSE-EAR CRESS).
O65388 F12F1.22 PROTEIN - ARABIDOPSIS THALIANA (MOUSE-EAR CRESS).
O65456 PECTATE LYASE LIKE PROTEIN - ARABIDOPSIS THALIANA (MOUSE-EAR CRESS).
O65457 PECTATE LYASE LIKE PROTEIN - ARABIDOPSIS THALIANA (MOUSE-EAR CRESS).
PE56_LYCES PROBABLE PECTATE LYASE P56 PRECURSOR (EC 4.2.2.2) - LYCOPERSICON ESCULENTUM (TOMATO).
PE59_LYCES PROBABLE PECTATE LYASE P59 PRECURSOR (EC 4.2.2.2) - LYCOPERSICON ESCULENTUM (TOMATO).
PEL_LILLO PECTATE LYASE PRECURSOR (EC 4.2.2.2) - LILIUM LONGIFLORUM (TRUMPET LILY).
PEL_TOBAC PECTATE LYASE PRECURSOR (EC 4.2.2.2) - NICOTIANA TABACUM (COMMON TOBACCO).
Q40319 PECTATE LYASE HOMOLOG - MEDICAGO SATIVA (ALFALFA).
Q43862 POLLEN SPECIFIC PECTATE LYASE HOMOLOGUE (EC 4.2.2.2) (PECTATE TRANSELIMINASE) - ZEA MAYS (MAIZE).
Q96385 CHAO1 PRECURSOR - CHAMAECYPARIS OBTUSA.
SBP_CRYJA SUGI BASIC PROTEIN PRECURSOR (SBP) (MAJOR ALLERGEN CRY J 1) (CRY J I) - CRYPTOMERIA JAPONICA (JAPANESE CEDAR).

O24416 PECTATE LYASE - FRAGARIA ANANASSA (STRAWBERRY).

PELD_ERWCH PECTATE LYASE D PRECURSOR (EC 4.2.2.2) - ERWINIA CHRYSANTHEMI.

O08454 PECTATE LYASE (EC 4.2.2.2) (PECTATE TRANSELIMINASE) - AMYCOLATA SP.
PEL1_ERWCA PECTATE LYASE I PRECURSOR (EC 4.2.2.2) (PEL I) (PLA) - ERWINIA CAROTOVORA.
PEL2_ERWCA PECTATE LYASE II PRECURSOR (EC 4.2.2.2) (PEL II) (PLB) - ERWINIA CAROTOVORA.
PEL3_ERWCA PECTATE LYASE III PRECURSOR (EC 4.2.2.2) (PEL III) (PLC) - ERWINIA CAROTOVORA.
PELB_COLGL PECTATE LYASE B PRECURSOR (EC 4.2.2.2) - COLLETOTRICHUM GLOEOSPORIOIDES (ANTHRACNOSE FUNGUS) (GLOMERELLA CINGULATA).
PELB_ERWCH PECTATE LYASE B PRECURSOR (EC 4.2.2.2) - ERWINIA CHRYSANTHEMI.
PELC_ERWCH PECTATE LYASE C PRECURSOR (EC 4.2.2.2) - ERWINIA CHRYSANTHEMI.
PELE_ERWCH PECTATE LYASE E PRECURSOR (EC 4.2.2.2) - ERWINIA CHRYSANTHEMI.
PELF_ERWCH PECTATE LYASE E PRECURSOR (EC 4.2.2.2) - ERWINIA CHRYSANTHEMI.
PEL_BACSU PECTATE LYASE PRECURSOR (EC 4.2.2.2) (PL) - BACILLUS SUBTILIS.
PEL_EMENI PECTATE LYASE PRECURSOR (EC 4.2.2.2) - EMERICELLA NIDULANS (ASPERGILLUS NIDULANS).
PEL_PSEFL PECTATE LYASE PRECURSOR (EC 4.2.2.2) (PL) - PSEUDOMONAS FLUORESCENS.
PEL_PSEMA PECTATE LYASE PRECURSOR (EC 4.2.2.2) (PL) - PSEUDOMONAS MARGINALIS.
PEL_PSESL PECTATE LYASE PRECURSOR (EC 4.2.2.2) (PL) - PSEUDOMONAS SYRINGAE (PV. LACHRYMANS).
PEL_PSEVI PECTATE LYASE PRECURSOR (EC 4.2.2.2) (PL) - PSEUDOMONAS VIRIDIFLAVA.
PEL_XANCM PECTATE LYASE PRECURSOR (EC 4.2.2.2) (PL) (PSTRU-3) - XANTHOMONAS CAMPESTRIS (PV. MALVACEARUM).
Q04086 PECTATE LYASE 9.5 PRECURSOR (EC 4.2.2.2) - ERWINIA CAROTOVORA.
Q47467 PECTATE LYASE - ERWINIA CAROTOVORA.
Q59419 PECTATE LYASE PRECURSOR (EC 4.2.2.2) (PECTATE TRANSELIMINASE) - ERWINIA CHRYSANTHEMI.
Scan History
OWL29_6    2  100  NSINGLE    
SPTR37_9f 2 50 NSINGLE
Initial Motifs
Motif 1  width=18
Element Seqn Id St Int Rpt
CAQGFGKATHGGKWGDIY MPA2_AMBAR 71 71 -
CAQGFAKGTYGGKWGDVY MP13_AMBAR 71 71 -
CAIGFGKNAIGGKNGRIY 9612_LYCES 76 76 -
CAVGFGSSTMGGKGGDLY JC2124 45 45 -
CAQGFAKGTYGGKWGDVY C53240 71 71 -
CAQGFAKGTYGGKHGDVY B53240 72 72 -
CAQGFGKGTVGGKDGDIY MP11_AMBAR 70 70 -
CAQGFAKGTYGGKHGDVY MP12_AMBAR 72 72 -
CAQGFAKGTIGGKDGDIY MP14_AMBAR 71 71 -

Motif 2 width=26
Element Seqn Id St Int Rpt
DDDVANPKEGTLRFGAAQNRPLWIIF MP14_AMBAR 95 6 -
DDDVANPKEGTLRFAAAQNRPLWIIF MP12_AMBAR 96 6 -
DDDVANPKEGTLRFGAAQNRPLWIIF MP11_AMBAR 94 6 -
NDDPVNPKPGTLRHAVIQDEPLWIIF 9612_LYCES 100 6 -
DDDVANPKEGTLRFAAAQNRPLWIIF MP13_AMBAR 95 6 -
DDDVVNPKEGTLRFGATQDRPLWIIF MPA2_AMBAR 95 6 -
DDDPVNPAPGTLRYGATRDRPLWIIF JC2124 68 5 -
DDDVANPKEGTLRFAAAQNRPLWIIF C53240 95 6 -
DDDVANPKEGTLRFAAAQNRPLWIIF B53240 96 6 -

Motif 3 width=17
Element Seqn Id St Int Rpt
PMYIAGYKTFDGRGAQV JC2124 104 10 -
ELVVNSDKTIDGRGVKV C53240 131 10 -
ELVVNSDKTIDGRGVKV B53240 132 10 -
ELVMNSYKTIDGRGASV 9612_LYCES 136 10 -
ELVVNSDKTIDGRGVKV MP13_AMBAR 131 10 -
EMVVTSDKTIDGRGAKV MPA2_AMBAR 131 10 -
ELAINNDKTIDGRGAKV MP14_AMBAR 131 10 -
ELVVNSDKTIDGRGVKV MP12_AMBAR 132 10 -
EMVVNSDKTIDGRGAKV MP11_AMBAR 130 10 -

Motif 4 width=22
Element Seqn Id St Int Rpt
DGDALTLRTATNIWIDHNSFSN JC2124 170 49 -
DGDTINVAGSSQIWIDHCSLSK C53240 194 46 -
DGDAINVAGSSQIWIDHCSLSK B53240 195 46 -
DGDAISISGSSQIWIDHCSLSK MP11_AMBAR 193 46 -
DGDAINVAGSSQIWIDHCSLSK MP12_AMBAR 195 46 -
DGDAIGISGGSQIWIDHCSLSK MP14_AMBAR 194 46 -
DGDAIHVTGSSDIWIDHCTLSK MPA2_AMBAR 194 46 -
DGDTINVAGSSQIWIDHCSLSK MP13_AMBAR 194 46 -
DGDGISIFGGKNIWVDHCSLSN 9612_LYCES 200 47 -

Motif 5 width=20
Element Seqn Id St Int Rpt
RMPNLRHGFVQVVNNNYERW MP14_AMBAR 270 54 -
RMPRCRFGFFQVVNNNYDRW MP12_AMBAR 275 58 -
RMPRCRHGFFQVVNNNYDKW MP11_AMBAR 273 58 -
RMPRCRFGFFQVVNNNYDRW B53240 275 58 -
RMPRCRFGFFQVVNNNYDRW C53240 274 58 -
RMPRARYGLVHVANNNYDPW JC2124 250 58 -
RMPRCRHGYFHVVNNDYTHW 9612_LYCES 280 58 -
RMPRCRFGFFQVVNNNYDRW MP13_AMBAR 274 58 -
RMPRCRFGFFQIVNNFYDRW MPA2_AMBAR 274 58 -

Motif 6 width=20
Element Seqn Id St Int Rpt
YAIGGSSAPTILSQGNRFFA B53240 297 2 -
YAIGGSSAPTILCQGNRFLA C53240 296 2 -
YAIGGSSNPTILSEGNSFTA JC2124 272 2 -
YAIGGSASPTILSQGNRFCA MP11_AMBAR 295 2 -
YAIGGSSAPTILSQGNRFFA MP12_AMBAR 297 2 -
YALGGSAGPTILSQGNRFLA MP14_AMBAR 292 2 -
YAIGGSSNPTILSQGNKFVA MPA2_AMBAR 296 2 -
YAIGGSSAPTILCQGNRFLA MP13_AMBAR 296 2 -
YAIGGSAAPTINSQGNRFLA 9612_LYCES 302 2 -

Motif 7 width=25
Element Seqn Id St Int Rpt
WNWRTQNDVLENGAIFVASGSDPVL MPA2_AMBAR 338 22 -
WNWRSDKDLLENGAIFVTSGSDPVL MP13_AMBAR 338 22 -
WNWRSEGDLMLNGAYFRQTGAGASS 9612_LYCES 344 22 -
WNWRTDKDLLENGAIFLPSGSDPVL B53240 339 22 -
WNWRSDKDLLENGAIFVTSGSDPVL C53240 338 22 -
WVWQSTQDVFYNGAYFVSSGKYEGG JC2124 315 23 -
WNWRTNKDVLENGAIFVASGVDPVL MP11_AMBAR 337 22 -
WNWRTDRDLLENGAIFLPSGSDPVL MP12_AMBAR 339 22 -
WNWRSYMDVFENGAIFVPSGVDPVL MP14_AMBAR 333 21 -

Motif 8 width=24
Element Seqn Id St Int Rpt
AGMIPAEPGESALSLTSSAGVLSC MP11_AMBAR 367 5 -
AGMIPAEPGEAAIKLTSSAGVLSC C53240 368 5 -
KEAFNVENGNATPHLTQNAGVLTC JC2124 345 5 -
ASSLSARPSSLVGSITTNAGPVNC 9612_LYCES 375 6 -
AGMIPAEPGEAAIKLTSSAGVFSC MP13_AMBAR 368 5 -
AGMMQAEPGDMVPQLTMNAGVLTC MPA2_AMBAR 368 5 -
AGMIPAEPGEAVLRLTSSAGVLSC MP14_AMBAR 363 5 -
AGMIPAEPGEAVLRLTSSAGVLSC MP12_AMBAR 369 5 -
AGMIPAEPGEAVLRLTSSAGVLSC B53240 369 5 -
Final Motifs
Motif 1  width=18
Element Seqn Id St Int Rpt
CAQGFGKGTVGGKDGDIY MP11_AMBAR 70 70 -
CAQGFAKGTYGGKHGDVY MP12_AMBAR 72 72 -
CAQGFAKGTIGGKDGDIY MP14_AMBAR 71 71 -
CAQGFGKATHGGKWGDIY MPA2_AMBAR 71 71 -
CAQGFAKGTYGGKWGDVY MP13_AMBAR 71 71 -
CAIGFGKNAIGGKNGRIY 9612_LYCES 76 76 -
CAIGFGKNAMGGRNGRIY O24554 75 75 -
CALGFGSNAIGGKLGRIY PEL_TOBAC 68 68 -
CVLGFGRRTTGGKDGPIY O23665 127 127 -
CGIGFGRNAIGGRDGRFY O23017 103 103 -
CAKGFGRRTTGGLGGRIY Q40319 123 123 -
CAVGFGKSAVGGKYGSIY O65388 59 59 -
CALGFGINAMGGKYGPYY PE56_LYCES 69 69 -
CAVGFGSSTLGGKKGNIY O65457 69 69 -
CVVGFGSSTLGGKKGNLY O65456 69 69 -
CVKGFGRKTTGGAAGEIY PEL_LILLO 108 108 -
CVLGFGRKTTGGKNGPIY O64510 123 123 -
CAMGFGSKAIGGKDGEFY PE59_LYCES 122 122 -
CARGFGHRTVGGAAGKLY Q43862 113 113 -
CAVGFGSSAMGGKGGAFY Q96385 45 45 -
CAVGFGSSTMGGKGGDLY SBP_CRYJA 45 45 -

Motif 2 width=26
Element Seqn Id St Int Rpt
DDDVANPKEGTLRFGAAQNRPLWIIF MP11_AMBAR 94 6 -
DDDVANPKEGTLRFAAAQNRPLWIIF MP12_AMBAR 96 6 -
DDDVANPKEGTLRFGAAQNRPLWIIF MP14_AMBAR 95 6 -
DDDVVNPKEGTLRFGATQDRPLWIIF MPA2_AMBAR 95 6 -
DDDVANPKEGTLRFAAAQNRPLWIIF MP13_AMBAR 95 6 -
NDDPVNPKPGTLRHAVIQDEPLWIIF 9612_LYCES 100 6 -
NDDPVNPVPGTLRYAVIQDEPLWIIF O24554 99 6 -
DDDVVDPKPGTLRYGVIQKEPLWIIF PEL_TOBAC 92 6 -
DNDLINPKPGTLRHAVTRDGPLWIIF O23665 151 6 -
DDNPVNPRPGTLRHAVIQDRPLWIVF O23017 127 6 -
DNDMVNPRPGTLRFGAVQRGPLWIIF Q40319 147 6 -
SDDPENPRPGTLRYAVIQSKPLWITF O65388 82 5 -
DDDVVDPKPGTLRFGVIQKGPLWITF PE56_LYCES 93 6 -
YDNAQNPHPGSLRYGVIQAKPLWITF O65457 92 5 -
YDNAQNPQPGSLRYGVIQAKPLWITF O65456 92 5 -
DDSLTDPKFGTLRWGVIQDRPLWIIF PEL_LILLO 132 6 -
DNDLLKPKPGTIRHAVTRDRPLWIIF O64510 147 6 -
SDDYNDPKPGTLRHAVIQKEPLWIIF PE59_LYCES 145 5 -
DDEMIIPRKGTLRHAVIQDRPLWIVF Q43862 137 6 -
DDDPVNPAPGTLRYGATRERSLWIIF Q96385 68 5 -
DDDPVNPAPGTLRYGATRDRPLWIIF SBP_CRYJA 68 5 -

Motif 3 width=17
Element Seqn Id St Int Rpt
EMVVNSDKTIDGRGAKV MP11_AMBAR 130 10 -
ELVVNSDKTIDGRGVKV MP12_AMBAR 132 10 -
ELAINNDKTIDGRGAKV MP14_AMBAR 131 10 -
EMVVTSDKTIDGRGAKV MPA2_AMBAR 131 10 -
ELVVNSDKTIDGRGVKV MP13_AMBAR 131 10 -
ELVMNSYKTIDGRGASV 9612_LYCES 136 10 -
ELVMNSHKTIDGRGVNV O24554 135 10 -
ELIVTSNKTIDGRGFNV PEL_TOBAC 128 10 -
ELMITSDKTIDGRGARV O23665 187 10 -
ELIVNSFKTIDGRGANV O23017 163 10 -
ELMVSSDKTIDGRGANV Q40319 183 10 -
ELIMNSYKTIDGRGAKV O65388 118 10 -
ELIVSSNKTIDGRGKYV PE56_LYCES 129 10 -
ELMVNSYKTIDGRGAKV O65457 128 10 -
ELMVNSYKTIDGRGAKV O65456 128 10 -
ELIINNDKTIDGRGANV PEL_LILLO 168 10 -
ELIITNDKTIDGRGAKI O64510 183 10 -
EMIMQSDKTIDARGVNV PE59_LYCES 181 10 -
ELIVNHNKTIDGRGAQV Q43862 173 10 -
PLYIAGNKTIDGRGAEV Q96385 104 10 -
PMYIAGYKTFDGRGAQV SBP_CRYJA 104 10 -

Motif 4 width=22
Element Seqn Id St Int Rpt
DGDAISISGSSQIWIDHCSLSK MP11_AMBAR 193 46 -
DGDAINVAGSSQIWIDHCSLSK MP12_AMBAR 195 46 -
DGDAIGISGGSQIWIDHCSLSK MP14_AMBAR 194 46 -
DGDAIHVTGSSDIWIDHCTLSK MPA2_AMBAR 194 46 -
DGDTINVAGSSQIWIDHCSLSK MP13_AMBAR 194 46 -
DGDGISIFGGKNIWVDHCSLSN 9612_LYCES 200 47 -
DGDGISIFASKDIWIDHNSLSN O24554 199 47 -
EGDGISIFSSHDIWIDHISMSR PEL_TOBAC 192 47 -
DGDGISLIGATNIWIDHVSMTR O23665 251 47 -
DGDAISIFGSSHVWIDHNSLSH O23017 227 47 -
DGDAISVFGSSNIWIDHISLSD Q40319 247 47 -
DGDAIAIFDSSHIWIDHCFFSR O65388 182 47 -
EGDAISIFNSHDIWIDHISMSR PE56_LYCES 193 47 -
DGDAITIFGSSNVWIDHCYLAS O65457 192 47 -
DGDAIAIFGSSNIWIDHCYLAS O65456 192 47 -
DGDGISIIGSSNIWIDHVSLAR PEL_LILLO 232 47 -
DGDGINIFGATNVWIDHVSMTD O64510 247 47 -
DGDGISIFGASYIWIDHVSMQR PE59_LYCES 245 47 -
DGDGVSVLSSSNVWIDHVSMSS Q43862 236 46 -
DGDAITMRNVTDVWIDHNSLSD Q96385 170 49 -
DGDALTLRTATNIWIDHNSFSN SBP_CRYJA 170 49 -

Motif 5 width=20
Element Seqn Id St Int Rpt
RMPRCRHGFFQVVNNNYDKW MP11_AMBAR 273 58 -
RMPRCRFGFFQVVNNNYDRW MP12_AMBAR 275 58 -
RMPNLRHGFVQVVNNNYERW MP14_AMBAR 270 54 -
RMPRCRFGFFQIVNNFYDRW MPA2_AMBAR 274 58 -
RMPRCRFGFFQVVNNNYDRW MP13_AMBAR 274 58 -
RMPRCRHGYFHVVNNDYTHW 9612_LYCES 280 58 -
RMPRCRHGYFHVVNNDYTHW O24554 279 58 -
RMPRCRFGFFHLVNNDYTHW PEL_TOBAC 272 58 -
RMPRCRYGTIHVVNNDYTHW O23665 331 58 -
RMPRCRHGYFHVVNNDYTHW O23017 307 58 -
RMPRCRWGFFHVLNNDYTHW Q40319 327 58 -
RMPRVRRGYAHVANNRYEKW O65388 262 58 -
RMPRCRFGFFHLVNNDYTHW PE56_LYCES 273 58 -
RMPRVRRGYAHVANNRYDKW O65457 272 58 -
RMPRVRRGYAHVANNRYDKW O65456 272 58 -
RMPRCRYGFVHVVNNDYTHW PEL_LILLO 312 58 -
RMPRVRFGLVHVVNNDYTHW O64510 327 58 -
RMPRCRWGYIHVVNNDYTHW PE59_LYCES 325 58 -
RMPRCRYGFFHVVNNDYTHW Q43862 316 58 -
RMPRARYGLIHVANNNYDPW Q96385 250 58 -
RMPRARYGLVHVANNNYDPW SBP_CRYJA 250 58 -

Motif 6 width=20
Element Seqn Id St Int Rpt
YAIGGSASPTILSQGNRFCA MP11_AMBAR 295 2 -
YAIGGSSAPTILSQGNRFFA MP12_AMBAR 297 2 -
YALGGSAGPTILSQGNRFLA MP14_AMBAR 292 2 -
YAIGGSSNPTILSQGNKFVA MPA2_AMBAR 296 2 -
YAIGGSSAPTILCQGNRFLA MP13_AMBAR 296 2 -
YAIGGSAAPTINSQGNRFLA 9612_LYCES 302 2 -
YAIGGSASPTIYSQGNRFLA O24554 301 2 -
YAIGGSSGATIISQGNRFIA PEL_TOBAC 294 2 -
YAIGGNMNPTIISQGNRFIA O23665 353 2 -
YAIGGSANPTINSQGNRYAA O23017 329 2 -
YAIGGSSAPTILSQGNRFIA Q40319 349 2 -
YAIGGSADPTIFSEGNYFVA O65388 284 2 -
YAIGGSSGATIISQGNRFIA PE56_LYCES 295 2 -
YAIGGSADPTIFSEGNYFIA O65457 294 2 -
YAIGGSADPTIFSEGNYFIA O65456 294 2 -
YAVGGSQHPTIISQGNRYIA PEL_LILLO 334 2 -
YAIGGNMNPTIISQGNRFIA O64510 349 2 -
YAIGGSMHPTIIHQGNRFIA PE59_LYCES 347 2 -
YAIGGNMNPTIISQGNRFIA Q43862 338 2 -
YAIGGSSNPTILSEGNSFTA Q96385 272 2 -
YAIGGSSNPTILSEGNSFTA SBP_CRYJA 272 2 -

Motif 7 width=25
Element Seqn Id St Int Rpt
WNWRTNKDVLENGAIFVASGVDPVL MP11_AMBAR 337 22 -
WNWRTDRDLLENGAIFLPSGSDPVL MP12_AMBAR 339 22 -
WNWRSYMDVFENGAIFVPSGVDPVL MP14_AMBAR 333 21 -
WNWRTQNDVLENGAIFVASGSDPVL MPA2_AMBAR 338 22 -
WNWRSDKDLLENGAIFVTSGSDPVL MP13_AMBAR 338 22 -
WNWRSEGDLMLNGAYFRQTGAGASS 9612_LYCES 344 22 -
WNWRSEGDLMLNGAYFRESGGRAAS O24554 343 22 -
WTWISDGDDMENGATFTPSGDQNLL PEL_TOBAC 338 24 -
WNWQSEGDYFLNGAYFVQSGKANAW O23665 395 22 -
WNWRSEGDLLQNGAYFTSSGAAASG O23017 371 22 -
WQWRSEGDHFMNGATFIQSGPPIKN Q40319 391 22 -
WKWRTSKDVFKNGAYFVPSGYGTVT O65388 331 27 -
WTWITDGDDFENGATFTPSGDQNLL PE56_LYCES 339 24 -
WRWRTSNDVFKNGAFFVPSGYGSIP O65457 334 20 -
WRWRTSKDVFKNGAYFVPSGYGSIS O65456 334 20 -
WTWKSQGDLFVSGAFFVESGGPFEN PEL_LILLO 376 22 -
WNWQSEKDYFLNGAYFVQSGKANAW O64510 391 22 -
WTWRSEGNLFMNGAYFTESGDPEWS PE59_LYCES 389 22 -
WVWKSQGDVMMNGAFFNESGGQNER Q43862 380 22 -
WVWRSTQDSFNNGAYFVSSGKNEGT Q96385 315 23 -
WVWQSTQDVFYNGAYFVSSGKYEGG SBP_CRYJA 315 23 -

Motif 8 width=24
Element Seqn Id St Int Rpt
AGMIPAEPGESALSLTSSAGVLSC MP11_AMBAR 367 5 -
AGMIPAEPGEAVLRLTSSAGVLSC MP12_AMBAR 369 5 -
AGMIPAEPGEAVLRLTSSAGVLSC MP14_AMBAR 363 5 -
AGMMQAEPGDMVPQLTMNAGVLTC MPA2_AMBAR 368 5 -
AGMIPAEPGEAAIKLTSSAGVFSC MP13_AMBAR 368 5 -
ASSLSARPSSLVGSITTNAGPVNC 9612_LYCES 375 6 -
ASSLSGRPSTLVASMTRSAGALVC O24554 372 4 -
LNLIKPEPSSKVGILTKFSGALSC PEL_TOBAC 368 5 -
KFTIRPKPGTMVRKLTMDAGVLGC O23665 430 10 -
ASSLSAKSSSLVGHITSDAGALPC O23017 400 4 -
GFLMKPRHGSQANRLTRFSGALNC Q40319 421 5 -
AERFPVSHGSLVPLLTSSAGPLHC O65388 361 5 -
LNLIQPEPSSKVGLLTKFSGALSC PE56_LYCES 369 5 -
AQRFTVAPGNLVPSLTADAGPLNC O65457 364 5 -
AQRFTVAPGNLVPSLTADAGPLNC O65456 364 5 -
KDLIKAKPGTFVQRLTRFSGALNC PEL_LILLO 405 4 -
KFAIRPQPGTKVRRLTKDAGTLGC O64510 426 10 -
YDGISAAPAEDVTWMTRFAGVLGC PE59_LYCES 420 6 -
FDFIPAKHGRYVGQLTRFAGPLKC Q43862 409 4 -
NEAFKVENGSAAPQLTKNAGVLTC Q96385 345 5 -
KEAFNVENGNATPQLTKNAGVLTC SBP_CRYJA 345 5 -