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PR00796

Identifier
SPIKEPROTEIN  [View Relations]  [View Alignment]  
Accession
PR00796
No. of Motifs
9
Creation Date
27-AUG-1997  (UPDATE 07-JUN-1999)
Title
Viral spike glycoprotein precursor signature
Database References

PFAM; PF00974 Rhabd_glycop
INTERPRO; IPR002417
Literature References
1. KOENER, J.F., PASSAVANT, C.W., KURATH, G. AND LEONG, J.
Nucleotide sequence of a cDNA clone carrying the glycoprotein gene of
infectious hematopoietic necrosis virus, a fish rhabdovirus. 
J.VIROL. 61(5) 1342-1349 (1987). 
 
2. THIRY, M., LECOQ-XHONNEUX, F., DHEUR, I., RENARD, A. AND DE KINKELIN, P.
SEquence of a cDNA carrying the glycoprotein gene and part of the matrix
protein M2 gene of viral haemorrhagic scepticaemia virus, a fish rhabdovirus. 
BIOCHIM.BIOPHYS.ACTA 1090(3) 345-347 (1991).

Documentation
The glycoproteins of viral haemorrhagic scepticaemia virus [1] and of
infectious hematopoietic necrosis virus [2] are similar, and are responsible 
for forming spikes on the surface of the virion. The glycoprotein mediates 
binding of the virus to susceptible host cells and induces uptake of the
virus by the cell. The interaction between the internal components of the
virion and the portion of the glycoprotein exposed on the cytoplasmic face
of the plasma membrane probably directs envelopment and virus budding.
 
SPIKEPROTEIN is a 9-element fingerprint that provides a signature for this
family of viral spike glycoproteins. The fingerprint was derived from an
initial alignment of 18 sequences: the motifs were drawn from conserved
regions spanning the full alignment length. Two iterations on OWL29.4 were
required to reach convergence, at which point a true set comprising 26
sequences was identified. Several partial matches were also found, all
of which are fragments that lack the N- and C-terminal motifs. 
 
An update on SPTR37_9f identified a true set of 26 sequences.
Summary Information
26 codes involving  9 elements
0 codes involving 8 elements
0 codes involving 7 elements
0 codes involving 6 elements
0 codes involving 5 elements
0 codes involving 4 elements
0 codes involving 3 elements
0 codes involving 2 elements
Composite Feature Index
9262626262626262626
8000000000
7000000000
6000000000
5000000000
4000000000
3000000000
2000000000
123456789
True Positives
Q08452        Q08487        Q82020        Q82173        
Q82677 Q82678 Q82683 Q82686
Q82687 Q82689 Q82691 Q82693
Q82694 Q82695 Q82697 Q82699
Q82701 Q82703 Q82705 Q82706
Q88982 Q88983 Q88984 Q88985
VGLG_IHNV VGLG_VHSV0
Sequence Titles
Q08452      SPIKE GLYCOPROTEIN - INFECTIOUS HEMATOPOIETIC NECROSIS VIRUS. 
Q08487 SPIKE GLYCOPROTEIN PRECURSOR - VIRAL HEMORRHAGIC SEPTICEMIA VIRUS.
Q82020 GLYCOPROTEIN - HIRAME RHABDOVIRUS.
Q82173 SPIKE GLYCOPROTEIN PRECURSOR - VIRAL HEMORRHAGIC SEPTICEMIA VIRUS.
Q82677 GLYCOPROTEIN - INFECTIOUS HEMATOPOIETIC NECROSIS VIRUS.
Q82678 GLYCOPROTEIN - INFECTIOUS HEMATOPOIETIC NECROSIS VIRUS.
Q82683 GLYCOPROTEIN - INFECTIOUS HEMATOPOIETIC NECROSIS VIRUS.
Q82686 GLYCOPROTEIN - INFECTIOUS HEMATOPOIETIC NECROSIS VIRUS.
Q82687 GLYCOPROTEIN - INFECTIOUS HEMATOPOIETIC NECROSIS VIRUS.
Q82689 GLYCOPROTEIN - INFECTIOUS HEMATOPOIETIC NECROSIS VIRUS.
Q82691 GLYCOPROTEIN - INFECTIOUS HEMATOPOIETIC NECROSIS VIRUS.
Q82693 GLYCOPROTEIN - INFECTIOUS HEMATOPOIETIC NECROSIS VIRUS.
Q82694 GLYCOPROTEIN - INFECTIOUS HEMATOPOIETIC NECROSIS VIRUS.
Q82695 GLYCOPROTEIN - INFECTIOUS HEMATOPOIETIC NECROSIS VIRUS.
Q82697 GLYCOPROTEIN - INFECTIOUS HEMATOPOIETIC NECROSIS VIRUS.
Q82699 GLYCOPROTEIN - INFECTIOUS HEMATOPOIETIC NECROSIS VIRUS.
Q82701 GLYCOPROTEIN - INFECTIOUS HEMATOPOIETIC NECROSIS VIRUS.
Q82703 GLYCOPROTEIN - INFECTIOUS HEMATOPOIETIC NECROSIS VIRUS.
Q82705 GLYCOPROTEIN - INFECTIOUS HEMATOPOIETIC NECROSIS VIRUS.
Q82706 GLYCOPROTEIN - INFECTIOUS HEMATOPOIETIC NECROSIS VIRUS.
Q88982 TRANSMEMBRANE GLYCOPROTEIN - VIRAL HEMORRHAGIC SEPTICEMIA VIRUS.
Q88983 TRANSMEMBRANE GLYCOPROTEIN - VIRAL HEMORRHAGIC SEPTICEMIA VIRUS.
Q88984 TRANSMEMBRANE GLYCOPROTEIN - VIRAL HEMORRHAGIC SEPTICEMIA VIRUS.
Q88985 TRANSMEMBRANE GLYCOPROTEIN - VIRAL HEMORRHAGIC SEPTICEMIA VIRUS.
VGLG_IHNV SPIKE GLYCOPROTEIN PRECURSOR - INFECTIOUS HEMATOPOIETIC NECROSIS VIRUS (STRAIN ROUND BUTTE) (IHNV).
VGLG_VHSV0 SPIKE GLYCOPROTEIN PRECURSOR - VIRAL HEMORRHAGIC SEPTICEMIA VIRUS (STRAIN 07-71) (VHSV).
Scan History
OWL29_4    2  100  NSINGLE    
SPTR37_9f 2 27 NSINGLE
Initial Motifs
Motif 1  width=14
Element Seqn Id St Int Rpt
TWSNPLFTYPEGCT IHNGNVJ 35 35 -
TWSNPLFTYPEGCT IHNGNVI 35 35 -
TWSNPLFTYPEGCT IHNGNVH 35 35 -
TWSNPLFTYPEGCT IHNGNVG 35 35 -
TWSNPLFTYPEGCT IHNGNVL 35 35 -
TWANPLFTYPVDCP HRU24073 35 35 -
DWDTPLYTHPSNCR VGLG_VHSV0 37 37 -
TWSNPLFTYPEGCT VGLG_IHNV 35 35 -
TWSNPLFTYPEGCT IHNGNVF 35 35 -
TWSNPLFTYPEGCT IHNGNVE 35 35 -
TWSNPLFTYPEGCT IHNGNVD 35 35 -
TWSNPLFTYPEGCT IHNGNVC 35 35 -
TWSNPLFTYPEGCT IHNGNVA 35 35 -
TWSNPLFTYPEGCT IHNGNVB 32 32 -
DWDTPLYTHPSNCR VHU28747 37 37 -
DWDTPLYTHPSNCR VHU28798 37 37 -
TWSNPLFTYPEGCT IHNGNVK 35 35 -
DWDTPLYTHPSNCR VHU28800 37 37 -

Motif 2 width=22
Element Seqn Id St Int Rpt
QLRCPRIFDDENRGLIAYPTSI IHNGNVC 59 10 -
QLRCPRIFDDENRGLIAYPTSI IHNGNVD 59 10 -
QLRCPRIFDDENRGLIAYPTSI IHNGNVE 59 10 -
QLRCPRIFDDENRGLIAYPTSI IHNGNVF 59 10 -
QLRCPRIFDDENRGLIAYPTSI IHNGNVG 59 10 -
QLRCSRIFDDENRGLIAYPTSI IHNGNVH 59 10 -
QLRCPHEFEDINKGLVSVPTRI VGLG_VHSV0 61 10 -
QLRCPRIFDDENRGLIAYPTSI VGLG_IHNV 59 10 -
QLRCPRIFDDENRGLIAYPTSI IHNGNVI 59 10 -
QLRCPRIFDDENRGLIAYPTSI IHNGNVJ 59 10 -
QLRCPRIFDDENRGLIAYPTSI IHNGNVA 59 10 -
QLRCPRIFDDENRGLIAYPTSI IHNGNVB 56 10 -
QLRCPRIFDDENRGLIAYPTSI IHNGNVK 59 10 -
QLRCPRIFDDENRGLIAYPTSI IHNGNVL 59 10 -
QLRCPRIFDDENQGLVAYPAVI HRU24073 59 10 -
QLRCPHEFEDTNKGLVSVPAQI VHU28747 61 10 -
QLRCPHEFEDINKGLVSVPTQI VHU28798 61 10 -
QLRCPHEFEDINKGLVSVPTRI VHU28800 61 10 -

Motif 3 width=21
Element Seqn Id St Int Rpt
HKVLYRTTCSTGFFGGQTIEK IHNGNVC 100 19 -
HRVTYRVTCSTSFFGGQTIEK VGLG_VHSV0 102 19 -
HKVLYRTICSTGFFGGQTIEK VGLG_IHNV 100 19 -
HKVLYRTICSTGFFGGQTIEK IHNGNVA 100 19 -
HKVLYRTICSTGFFGGQTIEK IHNGNVB 97 19 -
HKVLYRTTCSTGFFGGQTIEK IHNGNVD 100 19 -
HKVLYRTICSTGFFGGQTIEK IHNGNVE 100 19 -
HKVLYRTICSTGFFGGQTIEK IHNGNVF 100 19 -
HKVLYRTTCSTGFFGGQTIEK IHNGNVG 100 19 -
HKVLYRTICSTGFFGGQTIEK IHNGNVH 100 19 -
HKVLYRTICSTGFFGGQTIEK IHNGNVI 100 19 -
HKVLYRTICSTGFFGGQTIEK IHNGNVJ 100 19 -
HKVLYRTTCSTGFFGGQTIEK IHNGNVK 100 19 -
HKVLYRTICSTGFFGGQTIEK IHNGNVL 100 19 -
HKVLYRTTCSTGFFGGQTIEK HRU24073 100 19 -
HRVTYRVTCSTSFFGGQTIEK VHU28747 102 19 -
HRVTYRVTCSTSFFGGQTIEK VHU28798 102 19 -
HRVTYRVTCSTSFFGGKTIEK VHU28800 102 19 -

Motif 4 width=21
Element Seqn Id St Int Rpt
FPEPSCIWMKNNVHKDITHYY VHU28800 147 24 -
FPAPRCQWYTDNVQNDLIFYY IHNGNVH 145 24 -
FPAPRCQWYTDNVQNDLIFYY IHNGNVI 145 24 -
FPAPRCQWYTDNVQNDLIFYY IHNGNVJ 145 24 -
FPAPRCQWYTDNVQNDLIFYY IHNGNVK 145 24 -
FPAPRCQWYTDNVQNDLIFYY IHNGNVL 145 24 -
FPAPRCQWYTDNVHNDLTFYY HRU24073 145 24 -
FPEPSCIWMKDNVHKDITHYY VHU28747 147 24 -
FPAPRCQWYTDNVQNDLIFYY IHNGNVF 145 24 -
FPAPRCQWYTDNVQNDLIFYY IHNGNVE 145 24 -
FPAPRCQWYTDNVQNDLIFYY IHNGNVD 145 24 -
FPAPRCQWYTDNVQNDLIFYY IHNGNVC 145 24 -
FPAPRCQWYTDNVQNDLIFYY IHNGNVB 142 24 -
FPAPRCQWYTDNVQNDLIFYY IHNGNVA 145 24 -
FPAPRCQWYTDNVQNDLIFYY VGLG_IHNV 145 24 -
FPEPSCIWMKNNVHKDITHYY VGLG_VHSV0 147 24 -
FPEPSCIWMKNNVHKDITHYY VHU28798 147 24 -
FPAPRCQWYTDNVQNDLIFYY IHNGNVG 145 24 -

Motif 5 width=21
Element Seqn Id St Int Rpt
DFIEGVCTTSPCQTHWQGVYW VGLG_VHSV0 186 18 -
DFIGGKCTKSPCQTHWSNVVW IHNGNVA 184 18 -
DFIGGKCTKSPCQTHWSNVVW IHNGNVB 181 18 -
DFIGGKCTKSPCQTHWSNVVW IHNGNVC 184 18 -
DFIGGKCTKSPCQTHWSNVVW IHNGNVD 184 18 -
DFIGGKCTKSPCQTHWSNVVW IHNGNVE 184 18 -
DFIGGKCTKSPCQTHWSNVVW IHNGNVF 184 18 -
DFIGGKCTKSPCQTHWSNVVW IHNGNVG 184 18 -
DFIGGKCTKSPCQTHWSNVVW IHNGNVH 184 18 -
DFIGGKCTKSPCQTHWSNVVW IHNGNVI 184 18 -
DFIGGKCTKSPCQTHWSNVVW IHNGNVJ 184 18 -
DFIGGKCTKSPCQTHWSNVVW IHNGNVK 184 18 -
DFIGGKCTKSPCQTHWSNVVW IHNGNVL 184 18 -
DFIEGKCSKSPCQTHWSNVVW HRU24073 184 18 -
DFIEGVCTTSPCPTHWQGVYW VHU28747 186 18 -
DFIEGVCTTSPCQTHWQGVYW VHU28798 186 18 -
DFIEGVCTTSPCQTHWQGVYW VHU28800 186 18 -
DFIGGKCTKSPCQTHWSNVVW VGLG_IHNV 184 18 -

Motif 6 width=19
Element Seqn Id St Int Rpt
RVVKATSYGHHPWGLHRAC IHNGNVB 228 26 -
RVVKATSYGHHPWGLHKAC IHNGNVA 231 26 -
RVVKATSYGHHPWGLHRAC IHNGNVC 231 26 -
RVVKATSYGHHPWGLHRAC IHNGNVD 231 26 -
RVVKATSYGHHPWGLHQAC IHNGNVE 231 26 -
RVVKATSYGHHPWGLHKAC IHNGNVF 231 26 -
RVVKATSYGHHPWGLHQAC IHNGNVG 231 26 -
RVVKATSYGHHPWGLHQAC IHNGNVH 231 26 -
RVVKATSYGHHPWGLHRAC IHNGNVI 231 26 -
RVVKATSYGHHPWGLHRAC IHNGNVJ 231 26 -
RVVKATSYGHHPWGLHRAC IHNGNVK 231 26 -
RVVKATSYGHHPWGLHQAC IHNGNVL 231 26 -
HVVKATSYGHHPWGPHRAC HRU24073 231 26 -
RVVKAIVAGHHPWGLTMAC VHU28747 233 26 -
RVVKAIVAGHHPWGLTMAC VHU28798 233 26 -
RVVKAIVAGHHPWGLTMAC VHU28800 233 26 -
RVVKATSYGHHPWGLHRAC VGLG_IHNV 231 26 -
RVVKAIVAGHHPWGLTMAC VGLG_VHSV0 233 26 -

Motif 7 width=12
Element Seqn Id St Int Rpt
FLLSKFRPSHPG VHU28747 331 79 -
FLLSKFRPSHPG VHU28798 331 79 -
YLLSKFRSPHPG IHNGNVL 329 79 -
YLLSKFRSPHPG IHNGNVK 329 79 -
FLLSKFRPSHPG VGLG_VHSV0 331 79 -
YLLSKFRSPHPG VGLG_IHNV 329 79 -
YLLSKFRSPHPG IHNGNVA 329 79 -
YLLSKFRSPHPG IHNGNVB 326 79 -
YLLSKFRSPHPG IHNGNVC 329 79 -
YLLSKFRSPHPG IHNGNVD 329 79 -
YLLSKFRSPHPG IHNGNVE 329 79 -
YLLSKFRSPHPG IHNGNVF 329 79 -
YLLSKFRSPHPG IHNGNVG 329 79 -
YLLSKFRSPHPG IHNGNVH 329 79 -
YLLSKFRSPHPG IHNGNVI 329 79 -
YLLSKFRSPHPG IHNGNVJ 329 79 -
YLLSKFRSPHPG HRU24073 329 79 -
FLLSKFRPSHPG VHU28800 331 79 -

Motif 8 width=16
Element Seqn Id St Int Rpt
IIPDLEKYVAQYKTSM IHNGNVI 404 63 -
IIPDLEKYVAQYKTSM IHNGNVA 404 63 -
IIPDLEKYVAQYKTSM IHNGNVB 401 63 -
IIPDLEKYVAQYKTSM IHNGNVC 404 63 -
IIPDLEKYVAQYKTSM IHNGNVD 404 63 -
IIPDLEKYVAQYKMSM IHNGNVE 404 63 -
IIPDLEKYVAQYKTSM IHNGNVF 404 63 -
IIPDLEKYVAQYKTSM IHNGNVG 404 63 -
IIPDLEKYVAQYKTSM IHNGNVH 404 63 -
IIPDLEKYVAQYKTSI IHNGNVJ 404 63 -
IIPDLEKYVAQYKTSM IHNGNVK 404 63 -
IIPDLEKYVAQYKMSM IHNGNVL 404 63 -
VIPDLEKYVAQYKVSM HRU24073 404 63 -
IIPDIEKYQSIYDSGM VHU28747 404 61 -
IIPDIEKYQSVYDSGM VHU28798 404 61 -
IIPDIEKYQSVYDSGM VHU28800 404 61 -
IIPDLEKYVAQYKTSM VGLG_IHNV 404 63 -
IIPDIEKYQSVYDSGM VGLG_VHSV0 404 61 -

Motif 9 width=26
Element Seqn Id St Int Rpt
WSLWPSLSGMGVVGGAFLLLVLCCCC VHU28747 460 40 -
WSFWPSLSALGGVPILLALVFFLYCC HRU24073 460 40 -
WSFWPTISALGGIPFVLLLAVAACCC IHNGNVL 460 40 -
WSFWPTISALGGIPFVLLLAVAACCC IHNGNVK 460 40 -
WSFWPTISALGGIPLVLLLAVAACCC IHNGNVJ 460 40 -
WSFWPTISALGGIPLVLLLAVAACCC IHNGNVI 460 40 -
WSFWPTISALGGIPFVLLLAVAACCC IHNGNVH 460 40 -
WSFWPTISALGGIPFVLLLAVAACCC IHNGNVG 460 40 -
WSFWPTISALGGIPFVLLLAVAACCC IHNGNVF 460 40 -
WSFWPTISALGGIPFVLLLAVAACCC IHNGNVE 460 40 -
WSFWPTISALGGIPLVLLLAVAACCC VGLG_IHNV 460 40 -
WSLWPSLSGMGVVGGAFLLLVLCCCC VGLG_VHSV0 460 40 -
WSFWPTISALGGIPFVLLLAVAACCC IHNGNVD 460 40 -
WSFWPTISALGGIPFVLLLAVAACCC IHNGNVC 460 40 -
WSFWPTISALGGIPLVLLLAVAACCC IHNGNVB 457 40 -
WSFWPTISALGGIPFVLLLAVAACCC IHNGNVA 460 40 -
WSLWPSLSGMGVVGGALSLLVLCCCC VHU28798 460 40 -
WSLWPSLSGMGVVGGAFLLLVLCCCC VHU28800 460 40 -
Final Motifs
Motif 1  width=14
Element Seqn Id St Int Rpt
TWSNPLFTYPEGCT Q82689 35 35 -
TWSNPLFTYPEGCT Q82691 35 35 -
TWSNPLFTYPEGCT Q82703 35 35 -
TWSNPLFTYPEGCT Q82678 35 35 -
TWSNPLFTYPEGCT Q82687 32 32 -
TWSNPLFTYPEGCT Q82695 35 35 -
TWSNPLFTYPEGCT Q82699 35 35 -
TWSNPLFTYPEGCT VGLG_IHNV 35 35 -
TWSNPLFTYPEGCT Q82686 35 35 -
TWSNPLFTYPEGCT Q82694 35 35 -
TWSNPLFTYPEGCT Q08452 53 53 -
TWSNPLFTYPEGCT Q82706 35 35 -
TWSNPLFTYPEGCT Q82683 35 35 -
TWSNPLFTYPEGCT Q82705 35 35 -
TWSNPLFTYPEGCT Q82693 35 35 -
TWSNPLFTYPEGCT Q82697 35 35 -
TWSNPLFTYPEGCT Q82701 35 35 -
TWSNPLFTYPEGCT Q82677 35 35 -
TWANPLFTYPVDCP Q82020 35 35 -
DWDTPLYTHPSNCR VGLG_VHSV0 37 37 -
DWDTPLYTHPSNCR Q08487 48 48 -
DWDTPLYTHPSNCR Q82173 37 37 -
DWDTPLYTHPSNCR Q88983 37 37 -
DWDTPLYTHPSNCR Q88985 37 37 -
DWDTPLYTHPSNCR Q88984 37 37 -
DWDTPLYTHPSNCR Q88982 37 37 -

Motif 2 width=22
Element Seqn Id St Int Rpt
QLRCPRIFDDENRGLIAYPTSI Q82689 59 10 -
QLRCPRIFDDENRGLIAYPTSI Q82691 59 10 -
QLRCPRIFDDENRGLIAYPTSI Q82703 59 10 -
QLRCPRIFDDENRGLIAYPTSI Q82678 59 10 -
QLRCPRIFDDENRGLIAYPTSI Q82687 56 10 -
QLRCPRIFDDENRGLIAYPTSI Q82695 59 10 -
QLRCPRIFDDENRGLIAYPTSI Q82699 59 10 -
QLRCPRIFDDENRGLIAYPTSI VGLG_IHNV 59 10 -
QLRCPRIFDDENRGLIAYPTSI Q82686 59 10 -
QLRCPRIFDDENRGLIAYPTSI Q82694 59 10 -
QLRCPRIFDDENRGLIAYPTSI Q08452 77 10 -
QLRCPRIFDDENRGLIAYPTSI Q82706 59 10 -
QLRCPRIFDDENRGLIAYPTSI Q82683 59 10 -
QLRCPRIFDDENRGLIAYPTSI Q82705 59 10 -
QLRCPRIFDDENRGLIAYPTSI Q82693 59 10 -
QLRCSRIFDDENRGLIAYPTSI Q82697 59 10 -
QLRCPRIFDDENRGLIAYPTSI Q82701 59 10 -
QLRCPRIFDDENRGLIAYPTSI Q82677 59 10 -
QLRCPRIFDDENQGLVAYPAVI Q82020 59 10 -
QLRCPHEFEDINKGLVSVPTRI VGLG_VHSV0 61 10 -
QLRCPHEFEDINKGLVSVPTKI Q08487 72 10 -
QLRCPHEFEDINKGLVSVPTKI Q82173 61 10 -
QLRCPHEFEDINKGLVSVPTQI Q88983 61 10 -
QLRCPHEFEDINKGLVSVPTRI Q88985 61 10 -
QLRCPHEFEDINKGLVSVPTQI Q88984 61 10 -
QLRCPHEFEDTNKGLVSVPAQI Q88982 61 10 -

Motif 3 width=21
Element Seqn Id St Int Rpt
HKVLYRTTCSTGFFGGQTIEK Q82689 100 19 -
HKVLYRTTCSTGFFGGQTIEK Q82691 100 19 -
HKVLYRTTCSTGFFGGQTIEK Q82703 100 19 -
HKVLYRTICSTGFFGGQTIEK Q82678 100 19 -
HKVLYRTICSTGFFGGQTIEK Q82687 97 19 -
HKVLYRTTCSTGFFGGQTIEK Q82695 100 19 -
HKVLYRTICSTGFFGGQTIEK Q82699 100 19 -
HKVLYRTICSTGFFGGQTIEK VGLG_IHNV 100 19 -
HKVLYRTICSTGFFGGQTIEK Q82686 100 19 -
HKVLYRTICSTGFFGGQTIEK Q82694 100 19 -
HKVLYRTICSTGFFGGQTIEK Q08452 118 19 -
HKVLYRTICSTGFFGGQTIEK Q82706 100 19 -
HKVLYRTICSTGFFGGQTIEK Q82683 100 19 -
HKVLYRTICSTGFFGGQTIEK Q82705 100 19 -
HKVLYRTICSTGFFGGQTIEK Q82693 100 19 -
HKVLYRTICSTGFFGGQTIEK Q82697 100 19 -
HKVLYRTICSTGFFGGQTIEK Q82701 100 19 -
HKVLYRTICSTGFFGGQTIEK Q82677 100 19 -
HKVLYRTTCSTGFFGGQTIEK Q82020 100 19 -
HRVTYRVTCSTSFFGGQTIEK VGLG_VHSV0 102 19 -
HRVTYRVTCSTSFFGGQTIEK Q08487 113 19 -
HRVTYRVTCSTSFFGGQTIEK Q82173 102 19 -
HRVTYRVTCSTSFFGGQTIEK Q88983 102 19 -
HRVTYRVTCSTSFFGGKTIEK Q88985 102 19 -
HRVTYRVTCSASFFGGKTIEK Q88984 102 19 -
HRVTYRVTCSTSFFGGQTIEK Q88982 102 19 -

Motif 4 width=21
Element Seqn Id St Int Rpt
FPAPRCQWYTDNVQNDLIFYY Q82689 145 24 -
FPAPRCQWYTDNVQNDLIFYY Q82691 145 24 -
FPAPRCQWYTDNVQNDLIFYY Q82703 145 24 -
FPAPRCQWYTDNVQNDLIFYY Q82678 145 24 -
FPAPRCQWYTDNVQNDLIFYY Q82687 142 24 -
FPAPRCQWYTDNVQNDLIFYY Q82695 145 24 -
FPAPRCQWYTDNVQNDLIFYY Q82699 145 24 -
FPAPRCQWYTDNVQNDLIFYY VGLG_IHNV 145 24 -
FPAPRCQWYTDNVQNDLIFYY Q82686 145 24 -
FPAPRCQWYTDNVQNDLIFYY Q82694 145 24 -
FPAPRCQWYTDNVQNDLIFYY Q08452 163 24 -
FPAPRCQWYTDNVQNDLIFYY Q82706 145 24 -
FPAPRCQWYTDNVQNDLIFYY Q82683 145 24 -
FPAPRCQWYTDNVQNDLIFYY Q82705 145 24 -
FPAPRCQWYTDNVQNDLIFYY Q82693 145 24 -
FPAPRCQWYTDNVQNDLIFYY Q82697 145 24 -
FPAPRCQWYTDNVQNDLIFYY Q82701 145 24 -
FPAPRCQWYTDNVQNDLIFYY Q82677 145 24 -
FPAPRCQWYTDNVHNDLTFYY Q82020 145 24 -
FPEPSCIWMKNNVHKDITHYY VGLG_VHSV0 147 24 -
FPEPSCIWMKNNVHKDITHYY Q08487 158 24 -
FPEPSCIWMKNNVHKDITHYY Q82173 147 24 -
FPEPSCIWMKNNVHKDITHYY Q88983 147 24 -
FPEPSCIWMKNNVHKDITHYY Q88985 147 24 -
FPEPSCIWMKNNVHKDITHYY Q88984 147 24 -
FPEPSCIWMKDNVHKDITHYY Q88982 147 24 -

Motif 5 width=21
Element Seqn Id St Int Rpt
DFIGGKCTKSPCQTHWSNVVW Q82689 184 18 -
DFIGGKCTKSPCQTHWSNVVW Q82691 184 18 -
DFIGGKCTKSPCQTHWSNVVW Q82703 184 18 -
DFIGGKCTKSPCQTHWSNVVW Q82678 184 18 -
DFIGGKCTKSPCQTHWSNVVW Q82687 181 18 -
DFIGGKCTKSPCQTHWSNVVW Q82695 184 18 -
DFIGGKCTKSPCQTHWSNVVW Q82699 184 18 -
DFIGGKCTKSPCQTHWSNVVW VGLG_IHNV 184 18 -
DFIGGKCTKSPCQTHWSNVVW Q82686 184 18 -
DFIGGKCTKSPCQTHWSNVVW Q82694 184 18 -
DFIGGKCTKSPCQTHWSNVVW Q08452 202 18 -
DFIGGKCTKSPCQTHWSNVVW Q82706 184 18 -
DFIGGKCTKSPCQTHWSNVVW Q82683 184 18 -
DFIGGKCTKSPCQTHWSNVVW Q82705 184 18 -
DFIGGKCTKSPCQTHWSNVVW Q82693 184 18 -
DFIGGKCTKSPCQTHWSNVVW Q82697 184 18 -
DFIGGKCTKSPCQTHWSNVVW Q82701 184 18 -
DFIGGKCTKSPCQIHWSNVVW Q82677 184 18 -
DFIEGKCSKSPCQTHWSNVVW Q82020 184 18 -
DFIEGVCTTSPCQTHWQGVYW VGLG_VHSV0 186 18 -
DFIEGVCTTSPCQTHWQGVYW Q08487 197 18 -
DFIEGVCTTSPCQTHWQGVYW Q82173 186 18 -
DFIEGVCTTSPCQTHWQGVYW Q88983 186 18 -
DFIEGVCTTSPCQTHWQGVYW Q88985 186 18 -
DFIEGVCTTSPCQTHWQGVYW Q88984 186 18 -
DFIEGVCTTSPCPTHWQGVYW Q88982 186 18 -

Motif 6 width=19
Element Seqn Id St Int Rpt
RVVKATSYGHHPWGLHRAC Q82689 231 26 -
RVVKATSYGHHPWGLHRAC Q82691 231 26 -
RVVKATSYGHHPWGLHRAC Q82703 231 26 -
RVVKATSYGHHPWGLHRAC Q82678 231 26 -
RVVKATSYGHHPWGLHRAC Q82687 228 26 -
RVVKATSYGHHPWGLHQAC Q82695 231 26 -
RVVKATSYGHHPWGLHRAC Q82699 231 26 -
RVVKATSYGHHPWGLHRAC VGLG_IHNV 231 26 -
RVVKATSYGHHPWGLHKAC Q82686 231 26 -
RVVKATSYGHHPWGLHKAC Q82694 231 26 -
RVVKATSYGHHPWGLHQAC Q08452 249 26 -
RVVKATSYGHHPWGLHQAC Q82706 231 26 -
RVVKATSYGHHPWGLHQAC Q82683 231 26 -
RVVKATSYGHHPWGLHQAC Q82705 231 26 -
RVVKATSYGHHPWGLHQAC Q82693 231 26 -
RVVKATSYGHHPWGLHQAC Q82697 231 26 -
RVVKATSYGHHPWGLHRAC Q82701 231 26 -
RVVKATSYGHHPWGLHRAC Q82677 231 26 -
HVVKATSYGHHPWGPHRAC Q82020 231 26 -
RVVKAIVAGHHPWGLTMAC VGLG_VHSV0 233 26 -
RVVKAIVAGHHPWGLTMAC Q08487 244 26 -
RVVKAIVAGHHPWGLTMAC Q82173 233 26 -
RVVKAIVAGHHPWGLTMAC Q88983 233 26 -
RVVKAIVAGHHPWGLTMAC Q88985 233 26 -
RVVKAIVAGHHPWGLTMAC Q88984 233 26 -
RVVKAIVAGHHPWGLTMAC Q88982 233 26 -

Motif 7 width=12
Element Seqn Id St Int Rpt
YLLSKFRSPHPG Q82689 329 79 -
YLLSKFRSPHPG Q82691 329 79 -
YLLSKFRSPHPG Q82703 329 79 -
YLLSKFRSPHPG Q82678 329 79 -
YLLSKFRSPHPG Q82687 326 79 -
YLLSKFRSPHPG Q82695 329 79 -
YLLSKFRSPHPG Q82699 329 79 -
YLLSKFRSPHPG VGLG_IHNV 329 79 -
YLLSKFRSPHPG Q82686 329 79 -
YLLSKFRSPHPG Q82694 329 79 -
YLLSKFRSPHPG Q08452 347 79 -
YLLSKFRSPHPG Q82706 329 79 -
YLLSKFRSPHPG Q82683 329 79 -
YLLSKFRSPHPG Q82705 329 79 -
YLLSKFRSPHPG Q82693 329 79 -
YLLSKFRSPHPG Q82697 329 79 -
YLLSKFRSPHPG Q82701 329 79 -
YLLSKFRSPHPG Q82677 329 79 -
YLLSKFRSPHPG Q82020 329 79 -
FLLSKFRPSHPG VGLG_VHSV0 331 79 -
FLLSKFRPSHPG Q08487 342 79 -
FLLSKFRPSHPG Q82173 331 79 -
FLLSKFRPSHPG Q88983 331 79 -
FLLSKFRPSHPG Q88985 331 79 -
FLLSKFRPSHPG Q88984 331 79 -
FLLSKFRPSHPG Q88982 331 79 -

Motif 8 width=16
Element Seqn Id St Int Rpt
IIPDLEKYVAQYKTSM Q82689 404 63 -
IIPDLEKYVAQYKTSM Q82691 404 63 -
IIPDLEKYVAQYKTSM Q82703 404 63 -
IIPDLEKYVAQYKTSM Q82678 404 63 -
IIPDLEKYVAQYKTSM Q82687 401 63 -
IIPDLEKYVAQYKTSM Q82695 404 63 -
IIPDLEKYVAQYKTSM Q82699 404 63 -
IIPDLEKYVAQYKTSM VGLG_IHNV 404 63 -
IIPDLEKYVAQYKTSM Q82686 404 63 -
IIPDLEKYVAQYKTSM Q82694 404 63 -
IIPDLEKYVAQYKTSM Q08452 422 63 -
IIPDLEKYVAQYKTSM Q82706 404 63 -
IIPDLEKYVAQYKMSM Q82683 404 63 -
IIPDLEKYVAQYKMSM Q82705 404 63 -
IIPDLEKYVAQYKMSM Q82693 404 63 -
IIPDLEKYVAQYKTSM Q82697 404 63 -
IIPDLEKYVAQYKTSI Q82701 404 63 -
IIPDLEKYVAQYKTSI Q82677 404 63 -
VIPDLEKYVAQYKVSM Q82020 404 63 -
IIPDIEKYQSVYDSGM VGLG_VHSV0 404 61 -
IIPDIEKYQSVYDSGM Q08487 415 61 -
IIPDIEKYQSVYDSGM Q82173 404 61 -
IIPDIEKYQSVYDSGM Q88983 404 61 -
IIPDIEKYQSVYDSGM Q88985 404 61 -
IIPDIEKYQSVYDSGM Q88984 404 61 -
IIPDIEKYQSIYDSGM Q88982 404 61 -

Motif 9 width=26
Element Seqn Id St Int Rpt
WSFWPTISALGGIPFVLLLAVAACCC Q82689 460 40 -
WSFWPTISALGGIPFVLLLAVAACCC Q82691 460 40 -
WSFWPTISALGGIPFVLLLAVAACCC Q82703 460 40 -
WSFWPTISALGGIPLVLLLAVAACCC Q82678 460 40 -
WSFWPTISALGGIPLVLLLAVAACCC Q82687 457 40 -
WSFWPTISALGGIPFVLLLAVAACCC Q82695 460 40 -
WSFWPTISALGGIPLVLLLAVAACCC Q82699 460 40 -
WSFWPTISALGGIPLVLLLAVAACCC VGLG_IHNV 460 40 -
WSFWPTISALGGIPFVLLLAVAACCC Q82686 460 40 -
WSFWPTISALGGIPFVLLLAVAACCC Q82694 460 40 -
WSFWPTISALGGIPFALLLAVAACCC Q08452 478 40 -
WSFWPTISALGGIPFALLLAVAACCC Q82706 460 40 -
WSFWPTISALGGIPFVLLLAVAACCC Q82683 460 40 -
WSFWPTISALGGIPFVLLLAVAACCC Q82705 460 40 -
WSFWPTISALGGIPFVLLLAVAACCC Q82693 460 40 -
WSFWPTISALGGIPFVLLLAVAACCC Q82697 460 40 -
WSFWPTISALGGIPLVLLLAVAACCC Q82701 460 40 -
WSFWPTISALGGIPLVLLLAVAACCC Q82677 460 40 -
WSFWPSLSALGGVPILLALVFFLYCC Q82020 460 40 -
WSLWPSLSGMGVVGGAFLLLVLCCCC VGLG_VHSV0 460 40 -
WSIWPSLSGMGVVGGAFLLLVLCCCC Q08487 471 40 -
WSIWPSLSGMGVVGGAFLLLVLCCCC Q82173 460 40 -
WSLWPSLSGMGVVGGALSLLVLCCCC Q88983 460 40 -
WSLWPSLSGMGVVGGAFLLLVLCCCC Q88985 460 40 -
WSLWPSLSGMGVVGGALLLLVLCCCC Q88984 460 40 -
WSLWPSLSGMGVVGGAFLLLVLCCCC Q88982 460 40 -