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PR00545

Identifier
RETINOIDXR  [View Relations]  [View Alignment]  
Accession
PR00545
No. of Motifs
8
Creation Date
09-JUN-1996  (UPDATE 23-JUN-1999)
Title
Retinoid X receptor (2B nuclear receptor) signature
Database References
PRINTS; PR00398 STRDHORMONER
INTERPRO; IPR000003
PDB; 1HRA
SCOP; 1HRA
CATH; 1HRA
Literature References
1. NUCLEAR RECEPTORS NOMENCLATURE COMMITTEE
A unified nomenclature system for the nuclear receptor superfamily.
CELL 97 161-163 (1999).
 
2. NISHIKAWA, J-I., KITAURA, M., IMAGAWA, M. AND NISHIHARA, T.
Vitamin D receptor contains multiple dimerisation interfaces that
are functionally different.
NUCLEIC ACIDS RES. 23(4) 606-611 (1995).
 
3. DE VOS, P., SCHMITT, J., VERHOEVEN, G. AND STUNNENBERG, G.
Human androgen receptor expressed in HeLa cells activates transcription
in vitro.
NUCLEIC ACIDS RES. 22(7) 1161-1166 (1994).

Documentation
Steroid or nuclear hormone receptors (NRs) constitute an important super-
family of transcription regulators that are involved in widely diverse 
physiological functions, including control of embryonic development, cell
differentiation and homeostasis [1]. Members of the superfamily include the
steroid hormone receptors and receptors for thyroid hormone, retinoids, 
1,25-dihydroxy-vitamin D3 and a variety of other ligands. The proteins 
function as dimeric molecules in nuclei to regulate the transcription of 
target genes in a ligand-responsive manner [2,3]. In addition to C-terminal
ligand-binding domains, these nuclear receptors contain a highly-conserved,
N-terminal zinc-finger that mediates specific binding to target DNA 
sequences, termed ligand-responsive elements. In the absence of ligand,
steroid hormone receptors are thought to be weakly associated with nuclear
components; hormone binding greatly increases receptor affinity.
 
NRs are extremely important in medical research, a large number of them
being implicated in diseases such as cancer, diabetes, hormone resistance
syndromes, etc. [1]. While several NRs act as ligand-inducible transcription
factors, many do not yet have a defined ligand and are accordingly termed 
"orphan" receptors. During the last decade, more than 300 NRs have been
described, many of which are orphans, which cannot easily be named due to 
current nomenclature confusions in the literature. However, a new system 
has recently been introduced in an attempt to rationalise the increasingly 
complex set of names used to describe superfamily members [1].
 
The retinoic acid (retinoid X) receptor consists of 3 functional and 
structural domains: an N-terminal (modulatory) domain; a DNA binding domain
that mediates specific binding to target DNA sequences (ligand-responsive
elements); and a hormone binding domain. The N-terminal domain differs 
between retinoic acid isoforms; the small highly-conserved DNA-binding
domain (~65 residues) occupies the central portion of the protein; and 
the ligand binding domain lies at the receptor C-terminus.
 
RETINOIDXR is an 4-element fingerprint that provides a signature for the
retinoid X receptors. The fingerprint was derived from an initial alignment
of 31 sequences: motif 1 lies in the hinge region; and motifs 2-4 reside in
the ligand-binding domain. Five iterations on SPTR57.15_40.15f were required
to reach convergence, at which point a true set comprising 125 sequences was
identified. Several partial matches were also found, all of which are family
members that fail to make significant matches with one or more motifs.
Summary Information
  15 codes involving  8 elements
2 codes involving 7 elements
0 codes involving 6 elements
0 codes involving 5 elements
6 codes involving 4 elements
10 codes involving 3 elements
15 codes involving 2 elements
Composite Feature Index
81515151515151515
722122122
600000000
500000000
420402565
3307030107
25000301012
12345678
True Positives
Q90415        Q90416        Q90417        Q90418        
Q91840 RRXA_CHICK RRXA_HUMAN RRXA_MOUSE
RRXA_RAT RRXA_XENLA RRXB_HUMAN RRXB_MOUSE
RRXG_HUMAN RRXG_MOUSE RXRG_XENLA
True Positive Partials
Codes involving 7 elements
O61448 O61449
Codes involving 4 elements
ARP1_CHICK ARP1_HUMAN ARP1_MOUSE ARP1_RAT
USP_DROME USP_MANSE
Codes involving 3 elements
7UP1_DROME CF1_BOMMO COT1_MOUSE COTF_HUMAN
O45117 O76202 Q06725 Q06726
Q62681 Q91430
Codes involving 2 elements
HNF4_DROME HNF4_HUMAN O61227 O77099
O77100 P70052 P79926 P97763
Q15625 Q26622 Q60927 Q62152
Q64104 Q91379 Q91720
Sequence Titles
Q90415      RETINOID X RECEPTOR - BRACHYDANIO RERIO (ZEBRAFISH) (ZEBRA DANIO). 
Q90416 RETINOID X RECEPTOR ALPHA - BRACHYDANIO RERIO (ZEBRAFISH) (ZEBRA DANIO).
Q90417 RETINOID X RECEPTOR DELTA - BRACHYDANIO RERIO (ZEBRAFISH) (ZEBRA DANIO).
Q90418 RETINOID X RECEPTOR EPSILON - BRACHYDANIO RERIO (ZEBRAFISH) (ZEBRA DANIO).
Q91840 RETINOID X RECEPTOR BETA - XENOPUS LAEVIS (AFRICAN CLAWED FROG).
RRXA_CHICK RETINOIC ACID RECEPTOR RXR-ALPHA - GALLUS GALLUS (CHICKEN).
RRXA_HUMAN RETINOIC ACID RECEPTOR RXR-ALPHA - HOMO SAPIENS (HUMAN).
RRXA_MOUSE RETINOIC ACID RECEPTOR RXR-ALPHA - MUS MUSCULUS (MOUSE).
RRXA_RAT RETINOIC ACID RECEPTOR RXR-ALPHA - RATTUS NORVEGICUS (RAT).
RRXA_XENLA RETINOIC ACID RECEPTOR RXR-ALPHA - XENOPUS LAEVIS (AFRICAN CLAWED FROG).
RRXB_HUMAN RETINOIC ACID RECEPTOR RXR-BETA - HOMO SAPIENS (HUMAN).
RRXB_MOUSE RETINOIC ACID RECEPTOR RXR-BETA (MHC CLASS I REGULATORY ELEMENT BINDING PROTEIN H-2RIIBP) - MUS MUSCULUS (MOUSE).
RRXG_HUMAN RETINOIC ACID RECEPTOR RXR-GAMMA - HOMO SAPIENS (HUMAN).
RRXG_MOUSE RETINOIC ACID RECEPTOR RXR-GAMMA - MUS MUSCULUS (MOUSE).
RXRG_XENLA RETINOIC ACID RECEPTOR RXR-GAMMA - XENOPUS LAEVIS (AFRICAN CLAWED FROG).

O61448 RETINOID X RECEPTOR - AMBLYOMMA AMERICANUM.
O61449 RETINOID X RECEPTOR - AMBLYOMMA AMERICANUM.

ARP1_CHICK TRANSCRIPTION FACTOR COUP 2 (COUP-TF II) - GALLUS GALLUS (CHICKEN).
ARP1_HUMAN APOLIPOPROTEIN AI REGULATORY PROTEIN-1 (ARP-1) (TRANSCRIPTION FACTOR COUP 2) (CO
ARP1_MOUSE APOLIPOPROTEIN AI REGULATORY PROTEIN-1 (ARP-1) (TRANSCRIPTION FACTOR COUP 2) (CO
ARP1_RAT APOLIPOPROTEIN AI REGULATORY PROTEIN-1 (ARP-1) (TRANSCRIPTION FACTOR COUP 2) (CO
USP_DROME ULTRASPIRACLE PROTEIN (XR2C) (CHORION FACTOR 1) - DROSOPHILA MELANOGASTER (FRUIT FLY).
USP_MANSE ULTRASPIRACLE PROTEIN HOMOLOG - MANDUCA SEXTA (TOBACCO HAWKMOTH) (TOBACCO HORNWORM).

7UP1_DROME STEROID RECEPTOR SEVEN-UP TYPE 1 - DROSOPHILA MELANOGASTER (FRUIT FLY).
CF1_BOMMO RXR TYPE HORMONE RECEPTOR CF1 - BOMBYX MORI (SILK MOTH).
COT1_MOUSE COUP TRANSCRIPTION FACTOR 1 (COUP-TF1) (COUP-TFI) - MUS MUSCULUS (MOUSE).
COTF_HUMAN COUP TRANSCRIPTION FACTOR (COUP-TF) (V-ERBA RELATED PROTEIN EAR-3) - HOMO SAPIEN
O45117 ULTRASPIRACLE - CHIRONOMUS TENTANS (MIDGE).
O76202 ULTRASPIRACLE - CHORISTONEURA FUMIFERANA (SPRUCE BUDWORM).
Q06725 STEROID RECEPTOR HOMOLOG SVP 44 - BRACHYDANIO RERIO (ZEBRAFISH) (ZEBRA DANIO).
Q06726 STEROID RECEPTOR HOMOLOG SVP 46 - BRACHYDANIO RERIO (ZEBRAFISH) (ZEBRA DANIO).
Q62681 ORPHAN RECEPTOR COUP-TFI (HCOUP-TF1 HOMOLOG) - RATTUS NORVEGICUS (RAT).
Q91430 SVP[40]=SVP-RELATED NUCLEAR RECEPTOR/RETINOID SIGNALING MODULATOR - BRACHYDANIO

HNF4_DROME TRANSCRIPTION FACTOR HNF-4 HOMOLOG (DHNF4) - DROSOPHILA MELANOGASTER (FRUIT FLY).
HNF4_HUMAN HEPATOCYTE NUCLEAR FACTOR 4-ALPHA (HNF-4-ALPHA) (TRANSCRIPTION FACTOR HNF-4) (TRANSCRIPTION FACTOR 14) - HOMO SAPIENS (HUMAN).
O61227 NUCLEAR RECEPTOR - TENEBRIO MOLITOR (YELLOW MEALWORM).
O77099 NUCLEAR TRANSCRIPTION FACTOR 4 HOMOLOG ISOFORM A - AEDES AEGYPTI (YELLOWFEVER MOSQUITO).
O77100 NUCLEAR TRANSCRIPTION FACTOR 4 HOMOLOG ISOFORM B - AEDES AEGYPTI (YELLOWFEVER MOSQUITO).
P70052 ORPHAN NUCLEAR RECEPTOR XTLL - XENOPUS LAEVIS (AFRICAN CLAWED FROG).
P79926 HEPATOCYTE NUCLEAR FACTOR 4-BETA (HNF4-BETA) - XENOPUS LAEVIS (AFRICAN CLAWED FROG).
P97763 ORPHAN RECEPTOR - MUS MUSCULUS (MOUSE).
Q15625 STEROID RECEPTOR (TR2-11) - HOMO SAPIENS (HUMAN).
Q26622 ORPHAN STEROID HORMONE RECEPTOR 2 (STEROID HORMONE RECEPTOR SPSHR2) - STRONGYLOCENTROTUS PURPURATUS (PURPLE SEA URCHIN).
Q60927 TR2 (MTR2) - MUS MUSCULUS (MOUSE).
Q62152 ORPHAN RECEPTOR, TR2-11 - MUS MUSCULUS (MOUSE).
Q64104 TAILLESS HOMOLOG (MTLL=TAILLESS HOMOLOG) - MUS MUSCULUS (MOUSE).
Q91379 NUCLEAR RECEPTOR TLX - GALLUS GALLUS (CHICKEN).
Q91720 COUP TRANSCRIPTION FACTOR - XENOPUS LAEVIS (AFRICAN CLAWED FROG).
Scan History
OWL28_0    2  50   NSINGLE    
SPTR37_9f 1 50 NSINGLE
Initial Motifs
Motif 1  width=15
Element Seqn Id St Int Rpt
KREAVQEERQRGKDR RRXA_HUMAN 201 201 -
KREAVQEERQRGKDR RRXA_MOUSE 206 206 -
KREAVQEERQRGKDR RRXA_RAT 206 206 -
KREAVQEERQRGKDK RRXB_HUMAN 271 271 -
KREAVQEERQRGKDK RRXB_MOUSE 258 258 -
KREAVQEERQRSRER RRXG_MOUSE 205 205 -
KREAVQEERQGSRER RRXA_CHICK 209 209 -

Motif 2 width=20
Element Seqn Id St Int Rpt
EDMPVERILEAELAVEPKTE RRXA_HUMAN 228 12 -
EDMPVEKILEAELAVEPKTE RRXA_MOUSE 233 12 -
EDMPVEKILEAELAVEPKTE RRXA_RAT 233 12 -
EEMPVDRILEAELAVEQKSD RRXB_HUMAN 297 11 -
EEMPVDRILEAELAVEQKSD RRXB_MOUSE 284 11 -
EDMPVERILEAELAVEPKTE RRXG_MOUSE 232 12 -
EDMPVERILEAELAVEPKTE RRXA_CHICK 236 12 -

Motif 3 width=21
Element Seqn Id St Int Rpt
NDPVTNICQAADKQLFTLVEW RRXA_HUMAN 262 14 -
NDPVTNICQAADKQLFTLVEW RRXA_MOUSE 267 14 -
NDPVTNICQAADKQLFTLVEW RRXA_RAT 267 14 -
NDPVTNICQAADKQLFTLVEW RRXB_HUMAN 333 16 -
NDPVTNICQAADKQLFTLVEW RRXB_MOUSE 320 16 -
NDPVTNICHAADKQLFTLVEW RRXG_MOUSE 263 11 -
NDPVTNICHAADKQLFTLVEW RRXA_CHICK 267 11 -

Motif 4 width=18
Element Seqn Id St Int Rpt
NELLIASFSHRSIAVKDG RRXA_HUMAN 306 23 -
NELLIASFSHRSIAVKDG RRXA_MOUSE 311 23 -
NELLIASFSHRSIAVKDG RRXA_RAT 311 23 -
NELLIASFSHRSIDVRDG RRXB_HUMAN 377 23 -
NELLIASFSHRSIDVRDG RRXB_MOUSE 364 23 -
NELLIASFSHRSVSVQDG RRXG_MOUSE 307 23 -
NELLIASFSHRSVSVQDG RRXA_CHICK 311 23 -

Motif 5 width=21
Element Seqn Id St Int Rpt
FDRVLTELVSKMRDMQMDKTE RRXA_HUMAN 346 22 -
FDRVLTELVSKMRDMQMDKTE RRXA_MOUSE 351 22 -
FDRVLTELVSKMRDMQMDKTE RRXA_RAT 351 22 -
FDRVLTELVSKMRDMRMDKTE RRXB_HUMAN 417 22 -
FDRVLTELVSKMRDMRMDKTE RRXB_MOUSE 404 22 -
FDRVLTELVSKMKDMQMDKSE RRXG_MOUSE 347 22 -
FDRVLTELVSKMKDMQMDKSE RRXA_CHICK 351 22 -

Motif 6 width=18
Element Seqn Id St Int Rpt
PAEVEALREKVYASLEAY RRXA_HUMAN 386 19 -
PAEVEALREKVYASLEAY RRXA_MOUSE 391 19 -
PAEVEALREKVYASLEAY RRXA_RAT 391 19 -
PSEVEVLREKVYASLETY RRXB_HUMAN 457 19 -
PGEVEILREKVYASLETY RRXB_MOUSE 444 19 -
PSEVETLREKVYATLEAY RRXG_MOUSE 387 19 -
PSEVESLREKVYATLEAY RRXA_CHICK 391 19 -

Motif 7 width=20
Element Seqn Id St Int Rpt
KYPEQPGRFAKLLLRLPALR RRXA_HUMAN 407 3 -
KYPEQPGRFAKLLLRLPALR RRXA_MOUSE 412 3 -
KYPEQPGRFAKLLLRLPALR RRXA_RAT 412 3 -
KYPEQQGRFAKLLLRLPALR RRXB_HUMAN 478 3 -
KYPEQQGRFAKLLLRLPALR RRXB_MOUSE 465 3 -
KYPEQPGRFAKLLLRLPALR RRXG_MOUSE 408 3 -
KYPEQPGRFAKLLLRLPALR RRXA_CHICK 412 3 -

Motif 8 width=20
Element Seqn Id St Int Rpt
EHLFFFKLIGDTPIDTFLME RRXA_HUMAN 434 7 -
EHLFFFKLIGDTPIDTFLME RRXA_MOUSE 439 7 -
EHLFFFKLIGDTPIDTFLME RRXA_RAT 439 7 -
EHLFFFKLIGDTPIDTFLME RRXB_HUMAN 505 7 -
EHLFFFKLIGDTPIDTFLME RRXB_MOUSE 492 7 -
EHLFFFKLIGDTPIDSFLME RRXG_MOUSE 435 7 -
EHLFFFKLIGDTPIDTFLME RRXA_CHICK 439 7 -
Final Motifs
Motif 1  width=15
Element Seqn Id St Int Rpt
KREAVQEERQRGKDR RRXA_HUMAN 201 201 -
KREAVQEERQRGKDR RRXA_MOUSE 206 206 -
KREAVQEERQRGKDR RRXA_RAT 206 206 -
KREAVQEERQRGKDK RRXB_HUMAN 271 271 -
KREAVQEERQRGKDK RRXB_MOUSE 258 258 -
KREAVQEERQRGKER RRXA_XENLA 227 227 -
KREAVQEERQRAKER Q90415 120 120 -
KREAVQEERQRGKER Q91840 157 157 -
KREAVQEERQRGRER Q90416 183 183 -
KREAVQEERQRSRER RRXG_HUMAN 205 205 -
KREAVQEERQRSRER RRXG_MOUSE 205 205 -
KREAVQEERQGSRER RRXA_CHICK 209 209 -
KREVVQDERQRSVQE Q90418 158 158 -
KREAVQEERQRSREK RXRG_XENLA 212 212 -
KREAVQEERQKNKER Q90417 156 156 -

Motif 2 width=20
Element Seqn Id St Int Rpt
EDMPVERILEAELAVEPKTE RRXA_HUMAN 228 12 -
EDMPVEKILEAELAVEPKTE RRXA_MOUSE 233 12 -
EDMPVEKILEAELAVEPKTE RRXA_RAT 233 12 -
EEMPVDRILEAELAVEQKSD RRXB_HUMAN 297 11 -
EEMPVDRILEAELAVEQKSD RRXB_MOUSE 284 11 -
EDMPVEKILEAEHAVEPKTE RRXA_XENLA 254 12 -
EDMPVEKILEAELAVEPKTE Q90415 145 10 -
EEMPVEKILEAELAVEQKSD Q91840 183 11 -
EEMPVEKILDAELAVEPKTE Q90416 210 12 -
EDMPVERILEAELAVEPKTE RRXG_HUMAN 232 12 -
EDMPVERILEAELAVEPKTE RRXG_MOUSE 232 12 -
EDMPVERILEAELAVEPKTE RRXA_CHICK 236 12 -
EEMPVEKILEAEMAVEQKTE Q90418 192 19 -
EEMPVERILEAELAVDPKIE RXRG_XENLA 239 12 -
EEMPVEKILEAETAVEHRTD Q90417 182 11 -

Motif 3 width=21
Element Seqn Id St Int Rpt
NDPVTNICQAADKQLFTLVEW RRXA_HUMAN 262 14 -
NDPVTNICQAADKQLFTLVEW RRXA_MOUSE 267 14 -
NDPVTNICQAADKQLFTLVEW RRXA_RAT 267 14 -
NDPVTNICQAADKQLFTLVEW RRXB_HUMAN 333 16 -
NDPVTNICQAADKQLFTLVEW RRXB_MOUSE 320 16 -
SDPVTNICQAADKQLFTLVEW RRXA_XENLA 288 14 -
NDPVTNICQAADKQLFTLVEW Q90415 179 14 -
SDPVTNICQAADKQLFTLVEW Q91840 212 9 -
NDPVTNICQAADKQLFTLVEW Q90416 241 11 -
NDPVTNICHAADKQLFTLVEW RRXG_HUMAN 263 11 -
NDPVTNICHAADKQLFTLVEW RRXG_MOUSE 263 11 -
NDPVTNICHAADKQLFTLVEW RRXA_CHICK 267 11 -
NDPVTNICQAADKQLFTLVEW Q90418 224 12 -
NDPVTNICHAADKQLFTLVEW RXRG_XENLA 270 11 -
NDPVTNICQAADKQLFTLVEW Q90417 211 9 -

Motif 4 width=18
Element Seqn Id St Int Rpt
NELLIASFSHRSIAVKDG RRXA_HUMAN 306 23 -
NELLIASFSHRSIAVKDG RRXA_MOUSE 311 23 -
NELLIASFSHRSIAVKDG RRXA_RAT 311 23 -
NELLIASFSHRSIDVRDG RRXB_HUMAN 377 23 -
NELLIASFSHRSIDVRDG RRXB_MOUSE 364 23 -
NELLIASFSHRSIAVKDG RRXA_XENLA 332 23 -
NELLIASFSHRSIAVKDG Q90415 223 23 -
NELLIASFSHRSISVKDG Q91840 256 23 -
NELLIASFSHRSVTVKDG Q90416 285 23 -
NELLIASFSHRSVSVQDG RRXG_HUMAN 307 23 -
NELLIASFSHRSVSVQDG RRXG_MOUSE 307 23 -
NELLIASFSHRSVSVQDG RRXA_CHICK 311 23 -
NELLIASFSHRSITVKDG Q90418 268 23 -
NELLIASFSHRSVSVQDG RXRG_XENLA 314 23 -
NELLIAAFSHRSISVKDE Q90417 255 23 -

Motif 5 width=21
Element Seqn Id St Int Rpt
FDRVLTELVSKMRDMQMDKTE RRXA_HUMAN 346 22 -
FDRVLTELVSKMRDMQMDKTE RRXA_MOUSE 351 22 -
FDRVLTELVSKMRDMQMDKTE RRXA_RAT 351 22 -
FDRVLTELVSKMRDMRMDKTE RRXB_HUMAN 417 22 -
FDRVLTELVSKMRDMRMDKTE RRXB_MOUSE 404 22 -
FDRVLTELVSKMRDMQMDKTE RRXA_XENLA 372 22 -
FDRVLTELVSKMRDMQMDKTE Q90415 263 22 -
FDRVLTELVSKMRDMRMDKTE Q91840 296 22 -
FDRVLTELVSKMRDMQMDKTE Q90416 325 22 -
FDRVLTELVSKMKDMQMDKSE RRXG_HUMAN 347 22 -
FDRVLTELVSKMKDMQMDKSE RRXG_MOUSE 347 22 -
FDRVLTELVSKMKDMQMDKSE RRXA_CHICK 351 22 -
FDRVLTELVSKMRDMQMDKTE Q90418 322 36 -
FDRVLTELVSKMKDMDMDKSE RXRG_XENLA 354 22 -
FDRVLTELVCKMRDMQMDKTE Q90417 309 36 -

Motif 6 width=18
Element Seqn Id St Int Rpt
PAEVEALREKVYASLEAY RRXA_HUMAN 386 19 -
PAEVEALREKVYASLEAY RRXA_MOUSE 391 19 -
PAEVEALREKVYASLEAY RRXA_RAT 391 19 -
PSEVEVLREKVYASLETY RRXB_HUMAN 457 19 -
PGEVEILREKVYASLETY RRXB_MOUSE 444 19 -
PLEVEALREKVYASLEAY RRXA_XENLA 412 19 -
PSEVEALRERVYASLEAY Q90415 303 19 -
PGDVEVLREKVYASLESY Q91840 336 19 -
PSEVEALREKVYASLEGY Q90416 365 19 -
PSEVETLREKVYATLEAY RRXG_HUMAN 387 19 -
PSEVETLREKVYATLEAY RRXG_MOUSE 387 19 -
PSEVESLREKVYATLEAY RRXA_CHICK 391 19 -
PSEVELLREKVYASLEAY Q90418 362 19 -
AAEVEALREKVYATLESY RXRG_XENLA 394 19 -
SSEVELLREKVYASLESY Q90417 349 19 -

Motif 7 width=20
Element Seqn Id St Int Rpt
KYPEQPGRFAKLLLRLPALR RRXA_HUMAN 407 3 -
KYPEQPGRFAKLLLRLPALR RRXA_MOUSE 412 3 -
KYPEQPGRFAKLLLRLPALR RRXA_RAT 412 3 -
KYPEQQGRFAKLLLRLPALR RRXB_HUMAN 478 3 -
KYPEQQGRFAKLLLRLPALR RRXB_MOUSE 465 3 -
KYPEQPGRFAKLLLRLPALR RRXA_XENLA 433 3 -
KYPDQPGRFAKLLLRLPALR Q90415 324 3 -
KYPDQQGRFAKLLLRLPALR Q91840 357 3 -
NYPDQPGRFAKLLLRLPALR Q90416 386 3 -
KYPEQPGRFAKLLLRLPALR RRXG_HUMAN 408 3 -
KYPEQPGRFAKLLLRLPALR RRXG_MOUSE 408 3 -
KYPEQPGRFAKLLLRLPALR RRXA_CHICK 412 3 -
RYPDQQGRFAKLLLRLPALR Q90418 383 3 -
KYPDQPGRFAKLLLRLPALR RXRG_XENLA 415 3 -
KYPDQQGRFAKLLLRLPALR Q90417 370 3 -

Motif 8 width=20
Element Seqn Id St Int Rpt
EHLFFFKLIGDTPIDTFLME RRXA_HUMAN 434 7 -
EHLFFFKLIGDTPIDTFLME RRXA_MOUSE 439 7 -
EHLFFFKLIGDTPIDTFLME RRXA_RAT 439 7 -
EHLFFFKLIGDTPIDTFLME RRXB_HUMAN 505 7 -
EHLFFFKLIGDTPIDTFLME RRXB_MOUSE 492 7 -
EHLFFFKLIGDTPIDTFLME RRXA_XENLA 460 7 -
EHLFFFKLIGDTPIDTFLME Q90415 351 7 -
EHLFFFKLIGDTPIDTFLME Q91840 384 7 -
EHLFFFKLIGDTPIDTFLME Q90416 413 7 -
EHLFFFKLIGDTPIDTFLME RRXG_HUMAN 435 7 -
EHLFFFKLIGDTPIDSFLME RRXG_MOUSE 435 7 -
EHLFFFKLIGDTPIDTFLME RRXA_CHICK 439 7 -
EHLFFFKLIGDTPIDTFLME Q90418 410 7 -
EHLFFFKLIGDTPIDTFLME RXRG_XENLA 442 7 -
EHLFFFKLIGNTPIDTFLME Q90417 397 7 -