SPRINT Home UMBER Home Contents Standard Search Advanced Search Relation Search

==SPRINT==> PRINTS View



  selected as


PR00340

Identifier
PIIGLNB  [View Relations]  [View Alignment]  
Accession
PR00340
No. of Motifs
4
Creation Date
04-OCT-1994  (UPDATE 07-JUN-1999)
Title
P-II protein signature
Database References

PROSITE; PS00496 PII_GLNB_UMP; PS00638 PII_GLNB_CTER
BLOCKS; BL00496
PFAM; PF00543 P-II
INTERPRO; IPR002187
Literature References
1. DE ZAMAROCZY, M., DELORME, F. AND ELMERICH, C.
Characterization of three different nitrogen-regulated promoter regions for
the expression of glnB and glnA in Azospirillum brasilense.
MOL.GEN.GENET. 224 421-430 (1990).
 
2. SON, H.S. AND RHEE, S.G.
Cascade control of Escherichia coli glutamine synthetase. Purification and
properties of PII protein and nucleotide sequence of its structural gene.
J.BIOL.CHEM. 262 8690-8695 (1987).

Documentation
In Gram-negative bacteria, the activity and concentration of glutamine
synthetase (GS) is regulated in response to nitrgen source availability.
PII, a tetrameric protein encoded by the glnB gene, is a component of the
adenylation cascade involved in the regulation of GS activity [1]. In
times of nitrogen deficiency, GS is activated by deadenylation of each of
the subunits in the dodecameric GS complex [2] via a pathway stimulated by
uridylated PII. In nitrogen excess, PII is deuridylated, resulting in GS
inhibition by adenylation of each of the GS subunits [1]. PII also
regulates GS concentration at the transcriptional level by affecting the
phosphorylation of the NRI protein, which is the transcriptional activator
of the GS gene, glnA [2].
 
PIIGLNB is a 4-element fingerprint that provides a signature for PII
proteins. The fingerprint was derived from an initial alignment of 5
sequences: the motifs were drawn from conserved regions spanning virtually
the full alignment length, motif 4 including the region encoded by PROSITE
pattern PII_GLNB_CTER (PS00638). Two iterations on OWL24.0 were required
to reach convergence, at which point a true set comprising 14 sequences
was identified. A single partial match was also found, B61030, which is 
similar to PII proteins but lacks the uridylation site and shows little
similarity to the C-terminal region described by motif 4.
 
An update on SPTR37_9f identified a true set of 51 sequences.
Summary Information
51 codes involving  4 elements
0 codes involving 3 elements
0 codes involving 2 elements
Composite Feature Index
451515151
30000
20000
1234
True Positives
GLN1_METBA    GLN1_METIV    GLN1_METMP    GLN1_METTH    
GLN1_METTL GLN1_METTM GLN2_METBA GLN2_METIV
GLN2_METMP GLN2_METTH GLN2_METTL GLN2_METTM
GLN3_METBA GLN4_METBA GLNB_AZOBR GLNB_BRAJA
GLNB_ECOLI GLNB_FREDI GLNB_HAEIN GLNB_KLEPN
GLNB_MYCTU GLNB_NOSPU GLNB_PORPU GLNB_RHILV
GLNB_RHIME GLNB_RHOCA GLNB_RHORU GLNB_RHOSH
GLNB_SYNP7 GLNB_SYNY3 GLNK_ECOLI NRGB_BACSU
O27603 O27604 O28524 O28527
O29284 O30984 O31188 O32342
O54053 O54449 O66394 O66513
O66588 P70731 P94125 P94852
Q46132 Q58740 Y059_METJA
Sequence Titles
GLN1_METBA  NITROGEN FIXATION NIFHD1 REGION GLNB-LIKE PROTEIN 1 (ORF-105) - METHANOSARCINA BARKERI. 
GLN1_METIV NITROGEN FIXATION NIFHD REGION GLNB-LIKE PROTEIN 1 (ORF-105) - METHANOBACTERIUM IVANOVII.
GLN1_METMP NITROGEN FIXATION NIFHD REGION GLNB-LIKE PROTEIN 1 - METHANOCOCCUS MARIPALUDIS.
GLN1_METTH NITROGEN REGULATORY PROTEIN P-II - METHANOBACTERIUM THERMOAUTOTROPHICUM.
GLN1_METTL NITROGEN FIXATION NIFHD REGION GLNB-LIKE PROTEIN 1 (ORF-105) - METHANOCOCCUS THERMOLITHOTROPHICUS.
GLN1_METTM NITROGEN FIXATION NIFHD REGION GLNB-LIKE PROTEIN 1 - METHANOBACTERIUM THERMOAUTOTROPHICUM (STRAIN MARBURG / DSM 2133).
GLN2_METBA NITROGEN FIXATION NIFHD1 REGION GLNB-LIKE PROTEIN 2 (ORF-123) - METHANOSARCINA BARKERI.
GLN2_METIV NITROGEN FIXATION NIFHD REGION GLNB-LIKE PROTEIN 2 (ORF-122) - METHANOBACTERIUM IVANOVII.
GLN2_METMP NITROGEN FIXATION NIFHD REGION GLNB-LIKE PROTEIN 2 - METHANOCOCCUS MARIPALUDIS.
GLN2_METTH NITROGEN REGULATORY PROTEIN P-II - METHANOBACTERIUM THERMOAUTOTROPHICUM.
GLN2_METTL NITROGEN FIXATION NIFHD REGION GLNB-LIKE PROTEIN 2 (ORF-128) - METHANOCOCCUS THERMOLITHOTROPHICUS.
GLN2_METTM NITROGEN FIXATION NIFHD REGION GLNB-LIKE PROTEIN 2 - METHANOBACTERIUM THERMOAUTOTROPHICUM (STRAIN MARBURG / DSM 2133).
GLN3_METBA NITROGEN FIXATION NIFHD2 REGION GLNB-LIKE PROTEIN 1 (ORF-105) - METHANOSARCINA BARKERI.
GLN4_METBA NITROGEN FIXATION NIFHD2 REGION GLNB-LIKE PROTEIN 2 (ORF-125) - METHANOSARCINA BARKERI.
GLNB_AZOBR NITROGEN REGULATORY PROTEIN P-II - AZOSPIRILLUM BRASILENSE.
GLNB_BRAJA NITROGEN REGULATORY PROTEIN P-II - BRADYRHIZOBIUM JAPONICUM.
GLNB_ECOLI NITROGEN REGULATORY PROTEIN P-II 1 - ESCHERICHIA COLI.
GLNB_FREDI NITROGEN REGULATORY PROTEIN P-II (PII SIGNAL TRANSDUCING PROTEIN) - FREMYELLA DIPLOSIPHON (CALOTHRIX PCC 7601).
GLNB_HAEIN NITROGEN REGULATORY PROTEIN P-II - HAEMOPHILUS INFLUENZAE.
GLNB_KLEPN NITROGEN REGULATORY PROTEIN P-II - KLEBSIELLA PNEUMONIAE.
GLNB_MYCTU NITROGEN REGULATORY PROTEIN P-II - MYCOBACTERIUM TUBERCULOSIS.
GLNB_NOSPU NITROGEN REGULATORY PROTEIN P-II (PII SIGNAL TRANSDUCING PROTEIN) - NOSTOC PUNCTIFORME.
GLNB_PORPU NITROGEN REGULATORY PROTEIN P-II - PORPHYRA PURPUREA.
GLNB_RHILV NITROGEN REGULATORY PROTEIN P-II - RHIZOBIUM LEGUMINOSARUM (BIOVAR VICIAE).
GLNB_RHIME NITROGEN REGULATORY PROTEIN P-II - RHIZOBIUM MELILOTI.
GLNB_RHOCA NITROGEN REGULATORY PROTEIN P-II - RHODOBACTER CAPSULATUS (RHODOPSEUDOMONAS CAPSULATA).
GLNB_RHORU NITROGEN REGULATORY PROTEIN P-II - RHODOSPIRILLUM RUBRUM.
GLNB_RHOSH NITROGEN REGULATORY PROTEIN P-II (PII SIGNAL TRANSDUCING PROTEIN) - RHODOBACTER SPHAEROIDES (RHODOPSEUDOMONAS SPHAEROIDES).
GLNB_SYNP7 NITROGEN REGULATORY PROTEIN P-II (PII SIGNAL TRANSDUCING PROTEIN) - SYNECHOCOCCUS SP. (STRAIN PCC 7942) (ANACYSTIS NIDULANS R2), AND SYNECHOCOCCUS SP. (STRAIN PCC 6301).
GLNB_SYNY3 NITROGEN REGULATORY PROTEIN P-II (PII SIGNAL TRANSDUCING PROTEIN) - SYNECHOCYSTIS SP. (STRAIN PCC 6803).
GLNK_ECOLI NITROGEN REGULATORY PROTEIN P-II 2 - ESCHERICHIA COLI.
NRGB_BACSU NITROGEN REGULATORY PII-LIKE PROTEIN - BACILLUS SUBTILIS.
O27603 NITROGENASE GLNBA SUBUNIT - METHANOBACTERIUM THERMOAUTOTROPHICUM.
O27604 NITROGENASE GLNBB SUBUNIT - METHANOBACTERIUM THERMOAUTOTROPHICUM.
O28524 NITROGEN REGULATORY PROTEIN P-II (GLNB-3) - ARCHAEOGLOBUS FULGIDUS.
O28527 NITROGEN REGULATORY PROTEIN P-II (GLNB-2) - ARCHAEOGLOBUS FULGIDUS.
O29284 NITROGEN REGULATORY PROTEIN P-II (GLNB-1) - ARCHAEOGLOBUS FULGIDUS.
O30984 NITROGEN REGULATORY PROTEIN GLNK - RHODOBACTER SPHAEROIDES (RHODOPSEUDOMONAS SPHAEROIDES).
O31188 PII PROTEIN - RHODOBACTER SPHAEROIDES (RHODOPSEUDOMONAS SPHAEROIDES).
O32342 GLNB-LIKE PROTEIN - CLOSTRIDIUM CELLOBIOPARUM.
O54053 GLNK - RHIZOBIUM ETLI.
O54449 PII-PROTEIN - AZOTOBACTER VINELANDII.
O66394 GLNK PROTEIN - AZORHIZOBIUM CAULINODANS.
O66513 NITROGEN REGULATORY PII PROTEIN - AQUIFEX AEOLICUS.
O66588 PII-LIKE PROTEIN GLNBI - AQUIFEX AEOLICUS.
P70731 PII-LIKE PROTEIN - AZOSPIRILLUM BRASILENSE.
P94125 PII PROTEIN - AZORHIZOBIUM CAULINODANS.
P94852 PII PROTEIN - HERBASPIRILLUM SEROPEDICAE.
Q46132 PII-LIKE PROTEIN - CLOSTRIDIUM LONGISPORUM.
Q58740 HYPOTHETICAL NITROGEN REGULATORY PII-LIKE PROTEIN MJ1344 - METHANOCOCCUS JANNASCHII.
Y059_METJA HYPOTHETICAL NITROGEN REGULATORY PII-LIKE PROTEIN MJ0059 - METHANOCOCCUS JANNASCHII.
Scan History
OWL24_0    2  100  NSINGLE    
OWL28_0 1 100 NSINGLE
SPTR37_9f 2 204 NSINGLE
Initial Motifs
Motif 1  width=16
Element Seqn Id St Int Rpt
KKIDAIIKPFKLDDVR GLNB_KLEPN 2 2 -
KKIEAIIKPFKLDEVR GLNB_RHILV 2 2 -
KKIEAIIRPFKLDEVK GLNB_SYNP6 2 2 -
KMIKAIVRPDKVDDIV GLN1_METTL 2 2 -
KKIEAIIKPFKLDEVK GLNB_AZOBR 2 2 -
KKIDAIIKPFKLDDVR GLNB_ECOLI 2 2 -

Motif 2 width=19
Element Seqn Id St Int Rpt
VGLQGITVTEAKGFGRQKG GLNB_RHILV 22 4 -
AGIVGMTVSEVRGFGRQKG GLNB_SYNP6 23 5 -
VGIKGITVTEAKGFGRQKG GLNB_AZOBR 23 5 -
VGITGMTVTEVKGFGRQKG GLNB_ECOLI 23 5 -
VGITGMTVTEVKGFGRQKG GLNB_KLEPN 23 5 -
AGYPAFTKINSVGRGKQGG GLN1_METTL 23 5 -

Motif 3 width=24
Element Seqn Id St Int Rpt
TVEFLQKLKLEIVVEDAQVDTVID GLNB_SYNP6 52 10 -
VVDFLPKVKIEVVMEDSLVERAIE GLNB_AZOBR 52 10 -
MVDFLPKVKIEIVVPDDIVDTCVD GLNB_ECOLI 52 10 -
MVDFLPKVKIEIVVTDDIVDTCVD GLNB_KLEPN 52 10 -
VVDFLPKVKVEVVLADENAEAVIE GLNB_RHILV 51 10 -
FYDELPKTILLIAVNDDEVDEVVG GLN1_METTL 48 6 -

Motif 4 width=21
Element Seqn Id St Int Rpt
TGRIGDGKIFVSNVEEVIRIR GLNB_RHILV 82 7 -
TGNFGDGKIFIQPITEAYTIR GLN1_METTL 79 7 -
TGRIGDGKIFVTPVEEVVRIR GLNB_AZOBR 83 7 -
TGEIGDGKIFVSPVDQTIRIR GLNB_SYNP6 83 7 -
TGKIGDGKIFVFDVARVIRIR GLNB_ECOLI 83 7 -
TGKIGDGKIFVFDVARVIRIR GLNB_KLEPN 83 7 -
Final Motifs
Motif 1  width=16
Element Seqn Id St Int Rpt
KKIEAIIKPFKLDEVK O66513 2 2 -
KKIEAIIKPFKLDEVK P94125 2 2 -
KKIEAIIKPFKLDEVK GLNB_AZOBR 2 2 -
KKIEAIIKPFKLDEVK GLNB_RHOSH 2 2 -
KKIEAIIKPFKLDEVK O31188 2 2 -
KKIEAIIKPFKLDEVK GLNB_RHIME 2 2 -
KKIEAIIRPFKLDEVK GLNB_SYNP7 2 2 -
KKVEAIIRPFKLDEVK GLNB_NOSPU 2 2 -
KKIDAIIKPFKLDDVR GLNB_ECOLI 2 2 -
KKVEAIIRPFKLDEVK GLNB_FREDI 2 2 -
KKIDAIIKPFKLDDVR GLNB_KLEPN 2 2 -
KQVTAIIKPFKLDEVR P94852 2 2 -
KKIEAIIKPFKLDEVR GLNB_RHILV 2 2 -
KKIEAIIKPFKLDEVK GLNB_RHORU 2 2 -
KKIEAIIKPFKLDEVR GLNB_BRAJA 2 2 -
KKVEAIIKPFKLDEVK GLNB_RHOCA 2 2 -
KKVEAIIRPFKLDEVK GLNB_SYNY3 2 2 -
KKIEAMIKPFKLDDVR GLNB_HAEIN 2 2 -
KEIVAIIRPEKLEEVK GLN2_METTH 5 5 -
KLVMAIIKPFKLDEVR P70731 2 2 -
KLVTAIIKPFKLDDVR O54449 2 2 -
KIVMAIIKPFKLDEVR O54053 6 6 -
KKVEAIIRPEKLEIVK Q58740 2 2 -
KKVEAIIRPEKLEIVK Y059_METJA 2 2 -
KIVMAIIKPFKLEEVR O66394 2 2 -
KMVVAVIRPEKLECVK O28524 13 13 -
KMVVAVIRPEKLECVK O29284 13 13 -
KKIEAIIRPFKLNEVK GLNB_PORPU 2 2 -
KLVTVIIKPFKLEDVR GLNK_ECOLI 2 2 -
KKIEAIVRAEKFPEVK O28527 2 2 -
KLITAIVKPFTLDDVK GLNB_MYCTU 2 2 -
KLIIAAIKPFKLEEVR O30984 2 2 -
KMIRAIIRPEKSEEVI O27603 5 5 -
RKITAIIRREKLEDVK GLN1_METTH 5 5 -
KMIRAIIRPEKSEEVA GLN1_METTM 2 2 -
KKIEAVIRPEKLEELK Q46132 2 2 -
KEIIAIIRPNKINRTK GLN2_METIV 2 2 -
KMIRAILRPDKVEEVV GLN1_METIV 2 2 -
KMIRAVVRPSKAEEVV GLN1_METMP 2 2 -
KEITAIIRMNKAQRTK GLN4_METBA 2 2 -
KMVRAILRPEWTEEVT GLN3_METBA 2 2 -
KEVIAIIRPNTVSKTV GLN2_METTL 2 2 -
QMIRAIIRPGMETKVI GLN1_METBA 2 2 -
KEIIAIIRSNKMKKTR O27604 2 2 -
KMIKAIVRPDKVDDIV GLN1_METTL 2 2 -
KEVIAIIRPKNMKKTR GLN2_METTM 2 2 -
KEIIAIIRPSKMAQTK GLN2_METMP 2 2 -
KEVTAVVRPNKMSVTK GLN2_METBA 2 2 -
KLVKAVIRPEKVYEVI O66588 102 102 -
LLVRAIVRPEKSGAVM O32342 2 2 -
FKVEIVTRPANFEKLK NRGB_BACSU 6 6 -

Motif 2 width=19
Element Seqn Id St Int Rpt
IGIGGMTVTEVKGFGQQKG O66513 23 5 -
VGLQGITVTEAKGFGRQKG P94125 23 5 -
VGIKGITVTEAKGFGRQKG GLNB_AZOBR 23 5 -
AGVQGLSVTEVKGFGRQKG GLNB_RHOSH 23 5 -
AGVQGLSVTEVKGFGRQKG O31188 23 5 -
VGLQGITVTEAKGFGRQKG GLNB_RHIME 23 5 -
AGIVGMTVSEVRGFGRQKG GLNB_SYNP7 23 5 -
AGIVGMTVSEVRGFGRQKG GLNB_NOSPU 23 5 -
VGITGMTVTEVKGFGRQKG GLNB_ECOLI 23 5 -
AGIVGMTVSEVRGFGRQKG GLNB_FREDI 23 5 -
VGITGMTVTEVKGFGRQKG GLNB_KLEPN 23 5 -
VGVTGLTVTEVKGFGRQKG P94852 23 5 -
VGLQGITVTEAKGFGRQKG GLNB_RHILV 22 4 -
IGLQGITVTEAKGFGRQKG GLNB_RHORU 23 5 -
VGLQGITVTEAKGFGRQKG GLNB_BRAJA 22 4 -
AGIQGLSVIEVKGFGRQKG GLNB_RHOCA 23 5 -
AGIVGMTVSEVRGFGRQKG GLNB_SYNY3 23 5 -
IGISGMTITEVRGFGRQKG GLNB_HAEIN 23 5 -
AGCHGMTVTEVRGRGRQLG GLN2_METTH 26 5 -
LGIQGLTVSEVKGFGRQKG P70731 23 5 -
IGVQGITVTEVKGFGRQKG O54449 23 5 -
IGIQGLTVTEVKGYGRQKG O54053 27 5 -
AGYVGMTVSEVKGRGVQGG Q58740 23 5 -
AGYVGMTVSEVKGRGVQGG Y059_METJA 23 5 -
IGVHGLTVTEVKGYGRQKG O66394 23 5 -
RGFVGMTVTEVKGRGEQKG O28524 34 5 -
RGFVGMTVTEVKGRGEQKG O29284 34 5 -
GGIGGMTVVKVSGFGRQKG GLNB_PORPU 23 5 -
IGIQGLTVTEVKGFGRQKG GLNK_ECOLI 23 5 -
RGFYGMTVTDVKGRGQQGG O28527 23 5 -
AGVLGMTVSEIQGYGRQKG GLNB_MYCTU 23 5 -
IGVRGMMVTEIKGFGSQSG O30984 23 5 -
AGFPALTKMDVAGRGKQRG O27603 26 5 -
MGIHGMTVSDVKGRGQQMG GLN1_METTH 26 5 -
AGFPALTKIDVIGRGKQKG GLN1_METTM 23 5 -
GNINGITVDQVMGCGQQHG Q46132 23 5 -
LGFSSMTANAVFGRGRQKA GLN2_METIV 23 5 -
AGHVALTKMDVIGRGKQKG GLN1_METIV 23 5 -
SGCLALTKMDVIGRGKQKG GLN1_METMP 23 5 -
CGFPSFTIRRVMGRGKQRG GLN4_METBA 23 5 -
AGYYSLTKINVFGRGKQKG GLN3_METBA 23 5 -
VGFPAVTMAECFGRGKQKG GLN2_METTL 23 5 -
EGCISLTKMEVFGRGKQKG GLN1_METBA 23 5 -
LGFPAMNARRVLGRGHQRA O27604 23 5 -
AGYPAFTKINSVGRGKQGG GLN1_METTL 23 5 -
LGFPSFNATRVLGRGKQRA GLN2_METTM 23 5 -
LGFPAMTANRVLGRGKQKA GLN2_METMP 23 5 -
IGYRRMTAIPVLGKGKQRG GLN2_METBA 23 5 -
EGFKAMTMWDVVGRGKEGG O66588 123 5 -
ARFPAITKMDVFGRGKQKG O32342 21 3 -
IGVTSLTFSNVHGCGLQKA NRGB_BACSU 27 5 -

Motif 3 width=24
Element Seqn Id St Int Rpt
VIDFLPKVKIEVVVRDEDVEKVVE O66513 52 10 -
VVDFLPKVKIEVVLADDMVEKAVE P94125 52 10 -
VVDFLPKVKIEVVMEDSLVERAIE GLNB_AZOBR 52 10 -
VVDFLPKVKIEVVLADDMVEAAVE GLNB_RHOSH 52 10 -
VVDFLPKVKIEVVLADDMVEAAVE O31188 52 10 -
VVDFLPKVKVEVVLADENAEAVIE GLNB_RHIME 52 10 -
TVEFLQKLKLEIVVEDAQVDTVID GLNB_SYNP7 52 10 -
TVEFLQKLKVEIVVDDNQVDMVVD GLNB_NOSPU 52 10 -
MVDFLPKVKIEIVVPDDIVDTCVD GLNB_ECOLI 52 10 -
TVEFLQKLKVEIVVEDNQVDMVVD GLNB_FREDI 52 10 -
MVDFLPKVKIEIVVTDDIVDTCVD GLNB_KLEPN 52 10 -
VVDFLPKVKIEVVVDDKVVEQAVD P94852 52 10 -
VVDFLPKVKVEVVLADENAEAVIE GLNB_RHILV 51 10 -
VVDFLPKVKIELVIEDALVERAIE GLNB_RHORU 52 10 -
IVDFLPKVKIEIVIGDDLVERAID GLNB_BRAJA 51 10 -
VVDFLPKVKIEMVLPDEMVDIAIE GLNB_RHOCA 52 10 -
TVEFLQKLKIEIVVDEGQVDMVVD GLNB_SYNY3 52 10 -
MVDFLPKVKLEVVVPDELVDQCIE GLNB_HAEIN 52 10 -
RIDLLPKTKIEIVVNDEDVDTVVE GLN2_METTH 55 10 -
SVSFLPKVKVEVAVSDDQYEQVVE P70731 52 10 -
VVDFLPKVKIDVAIEDSQLDHVIE O54449 52 10 -
AVSFLPKLKIEIAVASELVDRAVE O54053 56 10 -
IVDLIPKVKIELVVKEEDVDNVID Q58740 52 10 -
IVDLIPKVKIELVVKEEDVDNVID Y059_METJA 52 10 -
AVSFLPKLKIEVAVPSDQVAKVVE O66394 52 10 -
EVDLLQKTKVEVVVSDDAVDEVVE O28524 63 10 -
EVDLLQKTKVEVVVSDDAVDEVVE O29284 63 10 -
SIDIIDKIKIEIIVSDDKVNSITE GLNB_PORPU 52 10 -
SVNFLPKVKIDVAIADDQLDEVID GLNK_ECOLI 52 10 -
EVTLLPKVKLEIVVKDDAVEEVIG O28527 52 10 -
SVDFVPKVRIEVVVDDSIVDKVVD GLNB_MYCTU 52 10 -
AVNFVPKVRLEIVVSDGLAESVVE O30984 52 10 -
YYEELPKTMLLIVVDDSDAEKVIN O27603 51 6 -
CVDLLPKVQLEIVVDSEDLERTVE GLN1_METTH 55 10 -
YYDEIPKTMMLIVVDDADAERVVL GLN1_METTM 48 6 -
MVNFLPKVEVKVIVDDSKVQEVIN Q46132 52 10 -
SMRYIPKRMISLVVPDEDASLVVE GLN2_METIV 61 19 -
YYDELPKVMLLLVTPSEEIDDIIE GLN1_METIV 48 6 -
YYDELPKTMLMLVVEDDTAENVIE GLN1_METMP 48 6 -
CIRFIPKRMFTIVVDDENVSEVVQ GLN4_METBA 60 18 -
HYDELAKTMIMMAVEDEAVDKVIK GLN3_METBA 48 6 -
FIKYIPKRLISIVVDDADVPLVVG GLN2_METTL 66 24 -
SYDELQKTMLLMVVEDEHKDRAIK GLN1_METBA 48 6 -
TMRYIPKRMISIMVEDRDVELVVE O27604 61 19 -
FYDELPKTILLIAVNDDEVDEVVG GLN1_METTL 48 6 -
TMRYIPKRMIQITVEDPDVQLVVE GLN2_METTM 61 19 -
DMRYIPKTMLTLIVPDEDASLVVE GLN2_METMP 61 19 -
GMKYIPKRLLSIVVNDEDVDQVIK GLN2_METBA 62 20 -
PYDELAKTLIMVAVKDEDVDKVIQ O66588 148 6 -
TYDEIPKDMLLVVCNDEDKDDLVK O32342 46 6 -
ESNVYERLKIEIVVSKVPVDQVTE NRGB_BACSU 56 10 -

Motif 4 width=21
Element Seqn Id St Int Rpt
TGRVGDGKIFIIPVEDVIRIR O66513 83 7 -
TGRIGDGKIFVSSIEEAIRIR P94125 83 7 -
TGRIGDGKIFVTPVEEVVRIR GLNB_AZOBR 83 7 -
TDKIGDGKIFISPVEQAIRIR GLNB_RHOSH 83 7 -
TDKIGDGKIFISPVEQAIRIR O31188 83 7 -
TGRIGDGKIFVSNVEEVIRIR GLNB_RHIME 83 7 -
TGEIGDGKIFVSPVDQTIRIR GLNB_SYNP7 83 7 -
TGEIGDGKIFISPVEQVIRIR GLNB_NOSPU 83 7 -
TGKIGDGKIFVFDVARVIRIR GLNB_ECOLI 83 7 -
TGEIGDGKIFISPVEQVVRIR GLNB_FREDI 83 7 -
TGKIGDGKIFVFDVARVIRIR GLNB_KLEPN 83 7 -
TGKIGDGKIFVQEVEQVIRIR P94852 83 7 -
TGRIGDGKIFVSNVEEVIRIR GLNB_RHILV 82 7 -
TGRIGDGKIFVYAIEEAIRIR GLNB_RHORU 83 7 -
TGRIGDGKIFVSNIEEAIRIR GLNB_BRAJA 82 7 -
TEKIGDGKIFVSSIEQAIRIR GLNB_RHOCA 83 7 -
TGEIGDGKIFISPVDSVVRIR GLNB_SYNY3 83 7 -
TGKIGDGKIFVYHVERAIRIR GLNB_HAEIN 83 7 -
TGDIGDGKIFISGVDEVVRIR GLN2_METTH 86 7 -
TGRIGDGKIFVLDIAQAVRIR P70731 83 7 -
TGKIGDGKIFVVNLEQAIRIR O54449 83 7 -
TGQIGDGKIFVYSIDHAVRIR O54053 87 7 -
TGNPGDGKIFVIPVERVVRVR Q58740 83 7 -
TGNPGDGKIFVIPVERVVRVR Y059_METJA 83 7 -
TGQIGDGKIFVFQIDHAVRIR O66394 83 7 -
TGKFGDGRIFVIPVEKSVKIR O28524 94 7 -
TGKFGDGRIFVIPVEKSVKIR O29284 94 7 -
TGEIGDGKIFISDVEQVIRIR GLNB_PORPU 83 7 -
TGKIGDGKIFVAELQRVIRIR GLNK_ECOLI 83 7 -
TGSPGDGKIFIIPVEDVVRIR O28527 83 7 -
TGKIGDGKVWVSPVDTIVRVR GLNB_MYCTU 83 7 -
TDKIGDGKIFVLDVEQAVRVR O30984 83 7 -
TGNIGDGKIFVSPVESAYTIR O27603 82 7 -
TGDVGDGKIFVTDVIDVVRIR GLN1_METTH 86 7 -
TGKIGDGKIFISPVENAYTVR GLN1_METTM 79 7 -
TGEVGDGKIFVSDVSECIRIR Q46132 83 7 -
TGQIGDGKIFVCPIEDAVRVR GLN2_METIV 92 7 -
TGNFGDGKIFISPVEEAYTVR GLN1_METIV 79 7 -
TGSFGYGKIFVSPVDEAYTVR GLN1_METMP 79 7 -
TGNAGDGKIFVSDVTEAIRIR GLN4_METBA 91 7 -
TGNMGDGKIFVNTIEAAYTIS GLN3_METBA 79 7 -
TGSFGDGRIFVLPVEEAIRVR GLN2_METTL 97 7 -
TGKYGDGRIFVTPVEEAYTIR GLN1_METBA 79 7 -
TGNIGDGKIFVCPVDDAVRIR O27604 92 7 -
TGNFGDGKIFIQPITEAYTIR GLN1_METTL 79 7 -
TGKIGDGKIFVCPVDDAMRIR GLN2_METTM 92 7 -
SGQYGDGKIFVCPIEDIITVR GLN2_METMP 92 7 -
TAQIGDGKIFVESIDEVIRIR GLN2_METBA 93 7 -
TGAYGDGKVFVCSISKVWTIR O66588 179 7 -
QGTFGDGRIFVSAVESAYTIS O32342 79 9 -
TGSPGDGKIFVYEISNTINIR NRGB_BACSU 87 7 -