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PR00187

Identifier
HAEMOCYANIN  [View Relations]  [View Alignment]  
Accession
PR00187
No. of Motifs
5
Creation Date
31-JUL-1991  (UPDATE 28-JUL-1999)
Title
Arthropod haemocyanin signature
Database References

PROSITE; PS00209 HEMOCYANIN_1; PS00210 HEMOCYANIN_2
BLOCKS; BL00209
PFAM; PF00372 hemocyanin
INTERPRO; IPR000896
PDB; 1HC2; 1LLA
SCOP; 1HC2; 1LLA
CATH; 1LLA
Literature References
1. GAYKEMA, W.P.J., HOL, W.G.J., VEREIJKEN, J.M., SOETER, N.M., BAK, H.J.
AND BEINTEMA, J.J.
3.2 Angstrom structure of the copper-containing oxygen-carrying protein
Panulirus interruptus haemocyanin.
NATURE 309 23-29 (1988).
 
2. LANG, W.H.
cDNA Cloning of the Octopus dofleini haemocyanin: Sequence of the
carboxy-terminal domain.
BIOCHEMISTRY 27 7277-7282 (1988).

Documentation
Haemocyanins are copper-containing oxygen transport proteins found in the 
haemolymph of many invertebrates. They are divided into 2 main groups -
arthropodan and molluscan. These have structurally similar oxygen-binding 
centres (which are similar to the oxygen-binding centre of tyrosinases [1])
but their quaternary structures are arranged differently: the arthropodan 
proteins exist as hexamers comprising 3 heterogeneous subunits (a, b and c)
and possess 1 oxygen-binding centre per subunit; the molluscan proteins 
exist as cylindrical oligomers of 10 to 20 subunits and possess 7 or 8 
oxygen-binding centres per subunit [2]. 
 
Although the proteins have similar amino-acid compositions, the only real 
similarity in their primary sequences is in the region corresponding to the
second copper-binding domain, which also shows similarity to the copper-
binding domain of tyrosinases [1] (see signature TYROSINASE).
 
HAEMOCYANIN is a 5-element fingerprint that provides a signature for the 
arthropodan haemocyanins and closely related larval storage proteins. The 
fingerprint was derived from an initial alignment of 4 sequences: motifs
1 and 2 encode the first copper-binding domain (CuA) (cf. PROSITE patterns 
HEMOCYANIN_1 (PS00209) and TYROSINASE_1 (PS00497)); motifs 3 and 4 
correspond to the area around the oxygen-binding domain; and motif 5 
encodes the second copper-binding domain (CuB) (cf. PROSITE patterns 
HEMOCYANIN_2 (PS00210) and TYROSINASE_2 (PS00498)) [1]. Three iterations on
OWL11.0 were required to reach convergence, at which point a true set
comprising 15 sequences was identified, all of which were arthropodan 
haemocyanins or arylphorin alpha subunit precursors. The latter are larval 
storage proteins found in the haemolymph of insects, and are believed to 
act as a reservoir of amino acids for the synthesis of adult proteins: like
haemocyanins, they exist as hexamers, but have 2 subunits, alpha and beta. 
 
An update on SPTR37_9f identified a true set of 49 sequences, and 6
partial matches.
Summary Information
  49 codes involving  5 elements
1 codes involving 4 elements
4 codes involving 3 elements
1 codes involving 2 elements
Composite Feature Index
54949494949
410111
330144
200110
12345
True Positives
ARY1_CALVI    ARY2_CALVI    ARYA_MANSE    ARYB_MANSE    
CRPI_PERAM HCY2_LIMPO HCY6_ANDAU HCYA_EURCA
HCYA_PANIN HCYB_PANIN HCYC_PANIN HCYD_EURCA
HCYE_EURCA HCY_PALVU HEXA_ANOGA HEXA_BLADI
JSB1_TRINI JSB2_TRINI LP1B_DROME LSP2_DROME
O17478 O17479 O17480 O17481
O18320 O18321 O44249 O44250
O44251 O61456 O76208 O76951
O77002 O77065 O77066 P91922
Q24995 Q25050 Q25516 Q25517
Q25518 Q25519 Q26060 Q26180
Q27451 Q27452 Q27598 SSP1_BOMMO
SSP2_BOMMO
True Positive Partials
Codes involving 4 elements
Q94729
Codes involving 3 elements
JSP1_TRINI Q24997 Q94607 Q94728
Codes involving 2 elements
P91957
Sequence Titles
ARY1_CALVI  ARYLPHORIN SUBUNIT A4 PRECURSOR - CALLIPHORA VICINA (BLUE BLOWFLY) (CALLIPHORA ERYTHROCEPHALA). 
ARY2_CALVI ARYLPHORIN SUBUNIT C223 PRECURSOR - CALLIPHORA VICINA (BLUE BLOWFLY) (CALLIPHORA ERYTHROCEPHALA).
ARYA_MANSE ARYLPHORIN ALPHA SUBUNIT PRECURSOR - MANDUCA SEXTA (TOBACCO HAWKMOTH) (TOBACCO HORNWORM).
ARYB_MANSE ARYLPHORIN BETA SUBUNIT PRECURSOR - MANDUCA SEXTA (TOBACCO HAWKMOTH) (TOBACCO HORNWORM).
CRPI_PERAM ALLERGEN CR-PI PRECURSOR - PERIPLANETA AMERICANA (AMERICAN COCKROACH).
HCY2_LIMPO HEMOCYANIN II - LIMULUS POLYPHEMUS (ATLANTIC HORSESHOE CRAB).
HCY6_ANDAU HEMOCYANIN AA6 CHAIN - ANDROCTONUS AUSTRALIS HECTOR (SAHARA SCORPION).
HCYA_EURCA HEMOCYANIN A CHAIN - EURYPELMA CALIFORNICA (AMERICAN TARANTULA).
HCYA_PANIN HEMOCYANIN A CHAIN - PANULIRUS INTERRUPTUS (CALIFORNIA SPINY LOBSTER).
HCYB_PANIN HEMOCYANIN B CHAIN - PANULIRUS INTERRUPTUS (CALIFORNIA SPINY LOBSTER).
HCYC_PANIN HEMOCYANIN C CHAIN - PANULIRUS INTERRUPTUS (CALIFORNIA SPINY LOBSTER).
HCYD_EURCA HEMOCYANIN D CHAIN - EURYPELMA CALIFORNICA (AMERICAN TARANTULA).
HCYE_EURCA HEMOCYANIN E CHAIN - EURYPELMA CALIFORNICA (AMERICAN TARANTULA).
HCY_PALVU HEMOCYANIN - PALINURUS VULGARIS (EUROPEAN SPINY LOBSTER).
HEXA_ANOGA HEXAMERIN 1.1 PRECURSOR (HEX-1.1) - ANOPHELES GAMBIAE (AFRICAN MALARIA MOSQUITO).
HEXA_BLADI HEXAMERIN PRECURSOR - BLABERUS DISCOIDALIS (TROPICAL COCKROACH).
JSB1_TRINI BASIC JUVENILE HORMONE-SUPPRESSIBLE PROTEIN 1 PRECURSOR (BJHSP1) - TRICHOPLUSIA NI (CABBAGE LOOPER).
JSB2_TRINI BASIC JUVENILE HORMONE-SUPPRESSIBLE PROTEIN 2 PRECURSOR (BJHSP2) - TRICHOPLUSIA NI (CABBAGE LOOPER).
LP1B_DROME LARVAL SERUM PROTEIN 1 BETA CHAIN PRECURSOR (HEXAMERIN 1 BETA) - DROSOPHILA MELANOGASTER (FRUIT FLY).
LSP2_DROME LARVAL SERUM PROTEIN 2 PRECURSOR (LSP-2) (HEXAMERIN 2) - DROSOPHILA MELANOGASTER (FRUIT FLY).
O17478 ARYLPHORIN PRECURSOR - HYALOPHORA CECROPIA (CECROPIA MOTH).
O17479 RIBOFLAVIN BINDING HEXAMERIN PRECURSOR - HYALOPHORA CECROPIA (CECROPIA MOTH).
O17480 MODERATELY METHIONINE RICH HEXAMERIN PRECURSOR - HYALOPHORA CECROPIA (CECROPIA MOTH).
O17481 VERY METHIONINE RICH HEXAMERIN PRECURSOR - HYALOPHORA CECROPIA (CECROPIA MOTH).
O18320 ARYLPHORIN - CALLIPHORA VICINA (BLUE BLOWFLY) (CALLIPHORA ERYTHROCEPHALA).
O18321 ARYLPHORIN - CALLIPHORA VICINA (BLUE BLOWFLY) (CALLIPHORA ERYTHROCEPHALA).
O44249 PRO-PHENOL OXIDASE SUBUNIT 1 (EC 1.14.18.1) (MONOPHENOL MONOOXYGENASE) (TYROSINASE) (PHENOLASE) (MONOPHENOL OXIDASE) (CRESOLASE) - MANDUCA SEXTA (TOBACCO HAWKMOTH) (TOBACCO HORNWORM).
O44250 PRO-PHENOL OXIDASE SUBUNIT 1 - ANOPHELES GAMBIAE (AFRICAN MALARIA MOSQUITO).
O44251 PRO-PHENOL OXIDASE SUBUNIT 2 - ANOPHELES GAMBIAE (AFRICAN MALARIA MOSQUITO).
O61456 EMBRYONIC HEMOLYMPH PROTEIN PRECURSOR - SCHISTOCERCA AMERICANA (AMERICAN GRASSHOPPER).
O76208 PROPHENOLOXIDASE - HYPHANTRIA CUNEA (FALL WEBWORM).
O76951 PROPHENOLOXIDASE - ANOPHELES GAMBIAE (AFRICAN MALARIA MOSQUITO).
O77002 PROPHENOLOXIDASE - HYPHANTRIA CUNEA (FALL WEBWORM).
O77065 DIAPAUSE ASSOCIATED PROTEIN 1 - CHORISTONEURA FUMIFERANA (SPRUCE BUDWORM).
O77066 DIAPAUSE ASSOCIATED PROTEIN 2 - CHORISTONEURA FUMIFERANA (SPRUCE BUDWORM).
P91922 HEXAMERIN LSP-2 - CALLIPHORA VICINA (BLUE BLOWFLY) (CALLIPHORA ERYTHROCEPHALA).
Q24995 ARYLPHORIN PRECURSOR - GALLERIA MELLONELLA (WAX MOTH).
Q25050 STORAGE PROTEIN-1 - HYPHANTRIA CUNEA (FALL WEBWORM).
Q25516 METHIONINE-RICH STORAGE PROTEIN 1 PRECURSOR - MANDUCA SEXTA (TOBACCO HAWKMOTH) (TOBACCO HORNWORM).
Q25517 METHIONINE-RICH STORAGE PROTEIN 2 PRECURSOR - MANDUCA SEXTA (TOBACCO HAWKMOTH) (TOBACCO HORNWORM).
Q25518 METHIONINE-RICH STORAGE PROTEIN 3 PRECURSOR - MANDUCA SEXTA (TOBACCO HAWKMOTH) (TOBACCO HORNWORM).
Q25519 PROPHENOLOXIDASE - MANDUCA SEXTA (TOBACCO HAWKMOTH) (TOBACCO HORNWORM).
Q26060 PROPHENOLOXIDASE - PACIFASTACUS LENIUSCULUS (SIGNAL CRAYFISH).
Q26180 HEMOCYANIN PRECURSOR - PENAEUS VANNAMEI (PENOEID SHRIMP) (EUROPEAN WHITE SHRIMP).
Q27451 PROPHENOLOXIDASE SUBUNIT 1 (EC 1.14.18.1) (MONOPHENOL MONOOXYGENASE) (TYROSINASE) (PHENOLASE) (MONOPHENOL OXIDASE) (CRESOLASE) - BOMBYX MORI (SILK MOTH).
Q27452 PROPHENOLOXIDASE SUBUNIT 2 (EC 1.14.18.1) - BOMBYX MORI (SILK MOTH).
Q27598 PRO-PHENOL OXIDASE A1 (EC 1.14.18.1) - DROSOPHILA MELANOGASTER (FRUIT FLY).
SSP1_BOMMO SEX-SPECIFIC STORAGE-PROTEIN 1 PRECURSOR (METHIONINE-RICH STORAGE PROTEIN) - BOMBYX MORI (SILK MOTH).
SSP2_BOMMO SEX-SPECIFIC STORAGE-PROTEIN 2 PRECURSOR - BOMBYX MORI (SILK MOTH).

Q94729 CYANOPROTEIN BETA SUBUNIT PRECURSOR - RIPTORTUS CLAVATUS.

JSP1_TRINI ACIDIC JUVENILE HORMONE-SUPPRESSIBLE PROTEIN 1 PRECURSOR (AJHSP1) - TRICHOPLUSIA NI (CABBAGE LOOPER).
Q24997 HEXAMERIN PRECURSOR - GALLERIA MELLONELLA (WAX MOTH).
Q94607 JUVENILE HORMONE BINDING PROTEIN - LOCUSTA MIGRATORIA (MIGRATORY LOCUST).
Q94728 CYANOPROTEIN ALPHA SUBUNIT PRECURSOR - RIPTORTUS CLAVATUS.

P91957 ARYLPHORIN - MUSCA DOMESTICA (HOUSE FLY).
Scan History
OWL11_0    3  100  NSINGLE    
OWL17_1 1 225 NSINGLE
OWL18_0 1 100 NSINGLE
OWL19_1 1 100 NSINGLE
OWL26_0 1 300 NSINGLE
SPTR37_9f 3 110 NSINGLE
Initial Motifs
Motif 1  width=14
Element Seqn Id St Int Rpt
KLAYFKEDVGTNAH BHTLE 153 153 -
NVAYFREDIGINSH BHTLD 156 156 -
RVAYFGEDIGMNIH BHLOA 180 180 -
RLAYYREDVGINAH HCY2_LIMPO 159 159 -

Motif 2 width=18
Element Seqn Id St Int Rpt
HWHWHIVYPATWDPAFMG BHTLE 167 0 -
HWHWHLVYPAFYDADFFG BHTLD 170 0 -
HVTWHMDFPFWWEDSYGY BHLOA 194 0 -
HWHWHLVYPSTWNPKYFG HCY2_LIMPO 173 0 -

Motif 3 width=12
Element Seqn Id St Int Rpt
DRKGELFYYMHQ BHTLD 191 3 -
DRKGELFYYMHQ HCY2_LIMPO 194 3 -
DRKGELFYYMHQ BHTLE 188 3 -
DRKGELFFWVHH BHLOA 214 2 -

Motif 4 width=13
Element Seqn Id St Int Rpt
QMCARYDCERLSN BHTLE 200 0 -
QMCARYDCERLSV BHTLD 203 0 -
QLTARFDFERLSN BHLOA 226 0 -
QMCARYDCERLSN HCY2_LIMPO 206 0 -

Motif 5 width=16
Element Seqn Id St Int Rpt
RDPIFYRYHRFIDNIF BHTLE 351 138 -
RDPIFYRYHRWMDNIF BHTLD 352 136 -
RDPIFYNWHRFIDNIF HCY2_LIMPO 356 137 -
RDPSFFRLHKYMDNIF BHLOA 376 137 -
Final Motifs
Motif 1  width=14
Element Seqn Id St Int Rpt
RLWYFREDIGVNLH O76951 193 193 -
RVAYFREDIGINLH Q27451 195 195 -
KLSYFREDIGINAH HCY6_ANDAU 156 156 -
KLAYFREDIGVNAH HCYA_EURCA 160 160 -
RLAYFREDIGVNLH O44251 194 194 -
RLAYWREDIGINLH Q27452 199 199 -
RLAYYREDVGINAH HCY2_LIMPO 159 159 -
KLAYFKEDVGTNAH HCYE_EURCA 154 154 -
RLAYWREDLGINLH Q25519 201 201 -
RLAYFREDIGVNSH Q27598 198 198 -
RIAYFYEDIGLNSY ARYA_MANSE 227 227 -
RVAYFREDIGINLH O44249 195 195 -
NVAYFREDIGINSH HCYD_EURCA 156 156 -
RLAYFREDLGINLH O76208 201 201 -
RLSYFTEDIGLNSY ARYB_MANSE 224 224 -
RVAYLGEDLGMNSH O61456 203 203 -
RLTYFTEDIGMNAY SSP2_BOMMO 224 224 -
RVAYFGEDIGMNIH HCYA_PANIN 180 180 -
RVSYWREDFGINSH Q26060 203 203 -
VMSYFMEDVDLNTY SSP1_BOMMO 227 227 -
RVAYFREDIGVNLH O77002 195 195 -
QMTYFTEDIDLNTY Q25516 228 228 -
QMTYFTEDIDLNTY Q25518 228 228 -
QMTYFTEDIDLNTY Q25517 228 228 -
RISYFTEDIDLNTY JSB1_TRINI 225 225 -
RVAYFGEDIGMNIH HCYB_PANIN 180 180 -
KIKYFTEDIDLNTY O17480 222 222 -
RMAYFREDIGVNMH O44250 194 194 -
RVAYFGEDIGLNTH Q26180 194 194 -
KLRYFTEDIDLNTY JSB2_TRINI 222 222 -
RLTYLTEDIGFNSY O17478 225 225 -
RVAYFGQDIGMNIH HCY_PALVU 180 180 -
KYSYFTEDVDLNTY O17481 229 229 -
QLAYFTEDIDLNAY O77066 219 219 -
HVAYFGEDVGMNTH HCYC_PANIN 186 186 -
YLNYNTEDIGLNAY HEXA_ANOGA 221 221 -
VLSYFTEDVGFNAY O18320 267 267 -
ALSYFTEDVGFNAY ARY2_CALVI 267 267 -
KLRYFTEDIDLNTY O77065 222 222 -
RIGYFTEDVDLNTY Q25050 228 228 -
VLSYFTEDVGLNTY O18321 267 267 -
VLSYFTEDVGLNTY ARY1_CALVI 267 267 -
DLAYYLEDVGFNAF LSP2_DROME 217 217 -
LLSYFIEDIGWNSY Q24995 224 224 -
LLAYFTSDVNLNAF CRPI_PERAM 207 207 -
SLSYFLEDIGFNAF P91922 216 216 -
KLSYFTEDLGWNAY LP1B_DROME 286 286 -
ELYYWYEDVGLNTY HEXA_BLADI 208 208 -
PMSYYLHDYSLNAH O17479 216 216 -

Motif 2 width=18
Element Seqn Id St Int Rpt
HWHWHLVYPFDASNRAIV O76951 207 0 -
HWHWHLVYPFDAADRAIV Q27451 209 0 -
HWHWHIVYPATWNPTVMG HCY6_ANDAU 170 0 -
HWHWHVVYPSTYDPAFFG HCYA_EURCA 174 0 -
HWHWHLVYPGEGPDRVVN O44251 208 0 -
HYHWHLVYPFTANDLSIV Q27452 213 0 -
HWHWHLVYPSTWNPKYFG HCY2_LIMPO 173 0 -
HWHWHIVYPATWDPAFMG HCYE_EURCA 168 0 -
HWHWHLVYPFSASDEKIV Q25519 215 0 -
HWHWHLVYPTTGPTEVVN Q27598 212 0 -
YYYFHMHLPFWWNSEKYG ARYA_MANSE 241 0 -
HWHWHLVYPFDSADRSIV O44249 209 0 -
HWHWHLVYPAFYDADFFG HCYD_EURCA 170 0 -
HWHWHLVYPFAASQREIV O76208 215 0 -
YYYFHSHLPFWWNSERYG ARYB_MANSE 238 0 -
HSQWHMDFPFWWKEDEYG O61456 217 0 -
YYYFHSHLPFWWTSEKYG SSP2_BOMMO 238 0 -
HVTWHMDFPFWWEDSYGY HCYA_PANIN 194 0 -
HWHWHLVYPIEMNVNRDR Q26060 217 0 -
MYYLHMNYPFWMTDDAYG SSP1_BOMMO 241 0 -
HWHWHLVYPGEGDMAIVN O77002 209 0 -
MYYLHMNYPFWMTNEMYG Q25516 242 0 -
MYYLHMNYPFWMTNEMYG Q25518 242 0 -
MYYLHMNYPFWMTNEMYG Q25517 242 0 -
MYYLHMSYPFWMTDDMYT JSB1_TRINI 239 0 -
HVTWHMDFPTWWQDSYGY HCYB_PANIN 194 0 -
YYYFHVDYPFWMKDQIFD O17480 236 0 -
HWHWHLVYPGDGPDEVVR O44250 208 0 -
HVTWHMEFPFWWNDAYGH Q26180 208 0 -
YFYFHVDYPFWMKDKFMD JSB2_TRINI 236 0 -
YYYFHSHLPFWWTSERYG O17478 239 0 -
HVTWHMDFPFWWDDSYGY HCY_PALVU 194 0 -
MYYLHMNYPYWLTDEVYG O17481 243 0 -
LYYLHMNYPYWMENEVYG O77066 233 0 -
HVLWHMEFPFWWEDSSGR HCYC_PANIN 200 0 -
YYYFMMDYSFLLGGDKFG HEXA_ANOGA 235 0 -
WYYLNMDYAFFLDGKTYG O18320 281 0 -
WYYLNMDYAFFLDGKTYG ARY2_CALVI 281 0 -
YFYFHADYPFWMRDTIFD O77065 236 0 -
MYYLHMSYPFWMTDDIYN Q25050 242 0 -
WYYLNMDYAFILDGKTFG O18321 281 0 -
WYYLNMDYAFILDGKTFG ARY1_CALVI 281 0 -
YYYFNLDYPFWTKGGEEH LSP2_DROME 231 0 -
YYYFHNRFPFWENGEQLI Q24995 238 0 -
NTYYRYYYPSWYNTTLYG CRPI_PERAM 221 0 -
YYYYNLDYPHWANGPVGH P91922 230 0 -
WYYLNMDYSFFLDGNTFD LP1B_DROME 300 0 -
YAYYYFNYPTFFNETEYG HEXA_BLADI 222 0 -
YYYHHLTYSKWLGGDVIP O17479 230 0 -

Motif 3 width=12
Element Seqn Id St Int Rpt
DRRGELFYYMHQ O76951 227 2 -
DRRGELFYYMHQ Q27451 229 2 -
DRKGELFFYMHQ HCY6_ANDAU 191 3 -
DRKGELFYYMHQ HCYA_EURCA 195 3 -
DRRGELFYYMHQ O44251 227 1 -
DRRGELFFYMHQ Q27452 233 2 -
DRKGELFYYMHQ HCY2_LIMPO 194 3 -
DRKGELFYYMHQ HCYE_EURCA 189 3 -
DRRGELFFYMHQ Q25519 235 2 -
DRRGELFYYMHH Q27598 231 1 -
ERRGEIYYYFYQ ARYA_MANSE 262 3 -
DRRGELFYYMHQ O44249 229 2 -
DRKGELFYYMHQ HCYD_EURCA 191 3 -
DRRGELFFYMHS O76208 235 2 -
SRRGEIYYYFYQ ARYB_MANSE 259 3 -
ERKGELFYYMHH O61456 238 3 -
ERRGEVYFYFYQ SSP2_BOMMO 259 3 -
DRKGELFFWVHH HCYA_PANIN 214 2 -
DRKGELFYYMHQ Q26060 233 -2 -
ERRGEIMMYANQ SSP1_BOMMO 262 3 -
DRRGELFYYMHQ O77002 228 1 -
ERRGEIVMYSNL Q25516 263 3 -
ERRGEIVMYSNL Q25518 263 3 -
ERRGEIVMYSNL Q25517 263 3 -
ERRGEIMGTYTQ JSB1_TRINI 260 3 -
DRKGELFFWVHH HCYB_PANIN 214 2 -
TRRFELTLYIYQ O17480 257 3 -
DRRGELFFYMHS O44250 227 1 -
DRKGENFFWIHH Q26180 228 2 -
MRRFELTYIMYQ JSB2_TRINI 257 3 -
HRRGEIYYYFYQ O17478 260 3 -
DRKGELFFWVHH HCY_PALVU 214 2 -
ERRGEILMYANS O17481 264 3 -
ERRGEVMTYASE O77066 254 3 -
DRKGESFFWVHH HCYC_PANIN 220 2 -
DRRGELYWYMHQ HEXA_ANOGA 256 3 -
DRRGEYWLYNVR O18320 302 3 -
DRRGEYWLYNVR ARY2_CALVI 302 3 -
VRRCELTLYIYQ O77065 257 3 -
ERRGEILSCANT Q25050 263 3 -
DRRGEYWLYNVR O18321 302 3 -
DRRGEYWLYNVR ARY1_CALVI 302 3 -
DRRGELYLYVHW LSP2_DROME 253 4 -
ERRGEIYYYVYQ Q24995 260 4 -
DRRGEQFYYTYK CRPI_PERAM 242 3 -
DRRGEFYLFLHW P91922 252 4 -
DRRGEWWLYNVH LP1B_DROME 321 3 -
DRRGELFYYTRQ HEXA_BLADI 243 3 -
ERRGEWYWFVHK O17479 251 3 -

Motif 4 width=13
Element Seqn Id St Int Rpt
QLVARYNFERFSN O76951 239 0 -
QIIARYNVERMCN Q27451 241 0 -
QMCARYDSERLSN HCY6_ANDAU 203 0 -
QMCARYDCERLSN HCYA_EURCA 207 0 -
QLIARYNVERFCN O44251 239 0 -
QVIARFNCERLCN Q27452 245 0 -
QMCARYDCERLSN HCY2_LIMPO 206 0 -
QMCARYDCERLSN HCYE_EURCA 201 0 -
QIIARYNCERLCN Q25519 247 0 -
QILARYNVERFCN Q27598 243 0 -
QLIARYYLERLTN ARYA_MANSE 274 0 -
QIIGRYNVERMCN O44249 241 0 -
QMCARYDCERLSV HCYD_EURCA 203 0 -
QMIARYNGERLNS O76208 247 0 -
QLMARYYFERLSN ARYB_MANSE 271 0 -
QLIARFDLERLSN O61456 250 0 -
QLLARYYFERLTN SSP2_BOMMO 271 0 -
QLTARFDFERLSN HCYA_PANIN 226 0 -
QMVARYDWERLSV Q26060 245 0 -
QLLARMRLERLSH SSP1_BOMMO 274 0 -
QIICRFNAERYCN O77002 240 0 -
QLLARYRLERLGR Q25516 275 0 -
QLLARYRLERLGR Q25518 275 0 -
QLLARYRLERLGR Q25517 275 0 -
QLLARLRLERLSH JSB1_TRINI 271 -1 -
QLTARFDFERLSN HCYB_PANIN 226 0 -
QILARYYLERLSN O17480 269 0 -
QLIARYNADRFCA O44250 239 0 -
QLTVRFDAERLSN Q26180 240 0 -
QILARYILERLSN JSB2_TRINI 269 0 -
QLLTRYYFERLTN O17478 272 0 -
QLTARFDAERFSN HCY_PALVU 226 0 -
QLLARLRMERLSH O17481 276 0 -
QLLARYRLERLSH O77066 266 0 -
QLTVRYDAERLSN HCYC_PANIN 232 0 -
MLLARYNLERMSN HEXA_ANOGA 268 0 -
QLLSRYYMERLSH O18320 314 0 -
QLLSRYYMERLSH ARY2_CALVI 314 0 -
QILARYYLERLSN O77065 269 0 -
QLLARYRLERLTH Q25050 275 0 -
QLLSRYYMERLTH O18321 314 0 -
QLLSRYYMERLTH ARY1_CALVI 314 0 -
QLLARWHLERLSH LSP2_DROME 265 0 -
KILARYYLERLAN Q24995 272 0 -
QIYARYFLERLSN CRPI_PERAM 254 0 -
QLLSRYYLERLSV P91922 264 0 -
QLLSRYYMERLSH LP1B_DROME 333 0 -
QLYARQFLERHSH HEXA_BLADI 255 0 -
QLVTRYYMERLSN O17479 263 0 -

Motif 5 width=16
Element Seqn Id St Int Rpt
RDPVFYRWHSYIDDIF O76951 396 144 -
RDPVFYRWHAYIDDIF Q27451 398 144 -
RDPIFYRWHRFIDNIF HCY6_ANDAU 353 137 -
RDPIFYRYHRFIDNVF HCYA_EURCA 357 137 -
RDPSFYRLHAQVDNMF O44251 396 144 -
RDPFFYRWHAYIDDVF Q27452 398 140 -
RDPIFYNWHRFIDNIF HCY2_LIMPO 356 137 -
RDPIFYRYHRFIDNIF HCYE_EURCA 351 137 -
RDPFFYRVHAWVDDIF Q25519 400 140 -
RDPIFYRWHGFIDTVF Q27598 399 143 -
RDPVFYQLYDRIINYI ARYA_MANSE 426 139 -
RDPFFYRWHRFVDDVF O44249 398 144 -
RDPIFYRYHRWMDNIF HCYD_EURCA 352 136 -
RDPFFYRWHAYIDDTF O76208 400 140 -
RDPMFYQLYNRILKYI ARYB_MANSE 423 139 -
RDPAFFRLHKYIDNLF O61456 399 136 -
RDPAFYQLYNRIVEYI SSP2_BOMMO 423 139 -
RDPSFFRLHKYMDNIF HCYA_PANIN 376 137 -
RDPVFYRWHKFVDDIF Q26060 409 151 -
RDPVFWMIMKRVCNIF SSP1_BOMMO 425 138 -
RDPVFYRWHSYIDDLF O77002 397 144 -
RDPVFWMIMKRVTNTF Q25516 426 138 -
RDPVFWMIMKRVTNTF Q25518 426 138 -
RDPVFWMIMKRVTNTF Q25517 426 138 -
RDPVFWRLMKRVTDTF JSB1_TRINI 422 138 -
RDPSFFRLHKYMDNIF HCYB_PANIN 376 137 -
RDPVFYQLQKRLVNIV O17480 423 141 -
RDPIFYRWHGMIDGIF O44250 396 144 -
RDPSFFRLHKYMDNIF Q26180 390 137 -
RDPVFYMLQKRIIDLV JSB2_TRINI 423 141 -
RDPAFYQLYNRIVGYI O17478 424 139 -
RDPSFFRLHKYMDNIF HCY_PALVU 376 137 -
RDPVFWKIMKRVMNSF O17481 427 138 -
RDPLYWRLMKRVNEIV O77066 417 138 -
RDPSFFRLHKYMDNIF HCYC_PANIN 382 137 -
RDPVFYQLYERFMDLY HEXA_ANOGA 415 134 -
RDPMFYMFYKKIASVY O18320 462 135 -
RDPMFYMFYKKIASVY ARY2_CALVI 462 135 -
PDPVFYVLQKRLVNLV O77065 426 144 -
RDPVFWQLIKRVTNTV Q25050 426 138 -
RDPMFYMFYKKIASVY O18321 462 135 -
RDPMFYMFYKKIASVY ARY1_CALVI 462 135 -
RDPIFYEVYKTIVSHY LSP2_DROME 405 127 -
RDPAFYQLYAKILDYI Q24995 426 141 -
RDPVFYQLWKRVDHLF CRPI_PERAM 403 136 -
RDPLFYSIYKDIVSYY P91922 404 127 -
RDPMYYMFYKSIAQVY LP1B_DROME 481 135 -
RDPANFHILKHINSYF HEXA_BLADI 448 180 -
SDPAFYMIWKRVLKLF O17479 420 144 -