SPRINT Home UMBER Home Contents Standard Search Advanced Search Relation Search

==SPRINT==> PRINTS View



  selected as


PR00184

Identifier
NEISSPPORIN  [View Relations]  [View Alignment]  
Accession
PR00184
No. of Motifs
7
Creation Date
17-MAR-1993  (UPDATE 07-JUN-1999)
Title
Neisseria sp. porin signature
Database References
PRINTS; PR00182 ECOLNEIPORIN
INTERPRO; IPR002299
Literature References
1. JAP, B.K. AND WALIAN, P.J.
Biophysics of the structure and function of porins.
Q.REV.BIOPHYS. 23 367-403 (1990).
 
2. NIKAIDO, H.
Porins and specific channels of bacterial outer membranes.
MOL.MICROBIOL. 6 435-442 (1992).
 
3. WEISS, M.S., KREUSCH, A., SCHILTZ, E., NESTEL, U., WELTE, W., 
WECKESSER, J. AND SCHULZ, G.E.
The structure of porin from Rhodobacter casulatus at 1.8A resolution.
FEBS LETT. 280 379-382 (1991).
 
4. PAUPTIT, R.A., SCHIRMER, T., JANSONIUS, J.N., ROSENBUSCH, J.P,
PARKER, M.W., TUCKER, A.D., TSERNOGLOU, D., WIESS, M.S. AND SCHULZ, G.E.
A common channel-forming motif in evolutionarily distant porins
J.STRUCT.BIOL. 107 136-145 (1991).
 
5. KREUSCH, A. AND SCHULZ, G.E. 
Refined structure of the porin from Rhodopseudomonas blastica. 
Comparison with the porin from Rhodobacter capsulatus.
J.MOL.BIOL. 243 891-905 (1994).
 
6. COWAN, S.W.
Bacterial porins: lessons from three high-resolution structures.
CURR.OPIN.STRUCT.BIOL. 3 501-507 (1993).

Documentation
Porins are found in the outer membranes of Gram-negative bacteria,
mitochondria and chloroplasts, where they form ion-selective channels for 
small hydrophilic molecules (up to ~600 Da) [1,2]. X-ray structure
analyses of several bacterial porins [3-5] have revealed a large 16-stranded
anti-parallel beta-barrel structure enclosing the transmembrane pore, by
contrast with all other integral membrane proteins described to date, 
which are alpha-helical. Three subunits form a trimer; the 3-fold axis is 
approximately parallel to the barrel axes and is assumed to be
perpendicular to the membrane plane [6].  
 
From the range of porins now known, similarities have been observed between
porins from different species, and between porins of different specificity
within the same species. But most porins cannot be related to each other on
the basis of sequence alone, and this is reflected in the lengths of the 
known porin sequences, which range from 282-483 residues/monomer.
 
NEISSPPORIN is a 7-element fingerprint that provides a signature for
porins from Neisseria species. The fingerprint was derived from an initial
alignment of 4 sequences: motif 7 includes the consensus encoded in 
PROSITE pattern GRAM_NEG_PORIN (PS00576). Two iterations on OWL19.1 were
required to reach convergence, at which point a true set comprising 39 
sequences was identified. Note that motif 6 alone is matched by the porin 
from Rhodobacter capsulatus (PORI_RHOCA), whose sequence is otherwise 
quite different from other known classes of porin and is thus not 
identified by any of our porin signatures.
 
An update on SPTR37_9f identified a true set of 57 sequences.
Summary Information
57 codes involving  7 elements
0 codes involving 6 elements
0 codes involving 5 elements
0 codes involving 4 elements
0 codes involving 3 elements
0 codes involving 2 elements
Composite Feature Index
757575757575757
60000000
50000000
40000000
30000000
20000000
1234567
True Positives
O08266        O51943        O51944        O51945        
O51946 O51947 O51948 O52693
O52694 O52695 O52696 O52697
O52698 O52699 O52700 O52701
OMA1_NEIGO OMA1_NEIME OMA2_NEIME OMB1_NEIGO
OMB1_NEIME OMB2_NEIGO OMB2_NEIME OMB3_NEIME
OMB4_NEIME OMB_NEILA OMB_NEISI P95344
P95345 P95346 P95347 P95348
P95349 P95350 P95351 P95352
Q05520 Q08249 Q08250 Q08251
Q08252 Q08253 Q08254 Q51056
Q51059 Q51066 Q51067 Q51068
Q51093 Q51094 Q51095 Q51096
Q51100 Q51240 Q51261 Q51271
Q57378
Sequence Titles
O08266      OUTER MEMBRANE PROTEIN PIB PRECURSOR - NEISSERIA GONORRHOEAE. 
O51943 HYBRID OUTER MEMBRANE PROTEIN IA/IB PRECURSOR - NEISSERIA GONORRHOEAE.
O51944 OUTER MEMBRANE PROTEIN I PRECURSOR - NEISSERIA GONORRHOEAE.
O51945 OUTER MEMBRANE PROTEIN I PRECURSOR - NEISSERIA GONORRHOEAE.
O51946 OUTER MEMBRANE PROTEIN I PRECURSOR - NEISSERIA GONORRHOEAE.
O51947 OUTER MEMBRANE PROTEIN I PRECURSOR - NEISSERIA GONORRHOEAE.
O51948 OUTER MEMBRANE PROTEIN I PRECURSOR - NEISSERIA GONORRHOEAE.
O52693 OUTER MEMBRANE PORIN - NEISSERIA GONORRHOEAE.
O52694 OUTER MEMBRANE PORIN - NEISSERIA GONORRHOEAE.
O52695 OUTER MEMBRANE PORIN - NEISSERIA GONORRHOEAE.
O52696 OUTER MEMBRANE PORIN - NEISSERIA GONORRHOEAE.
O52697 OUTER MEMBRANE PORIN - NEISSERIA GONORRHOEAE.
O52698 OUTER MEMBRANE PORIN - NEISSERIA GONORRHOEAE.
O52699 OUTER MEMBRANE PORIN - NEISSERIA GONORRHOEAE.
O52700 OUTER MEMBRANE PORIN - NEISSERIA GONORRHOEAE.
O52701 OUTER MEMBRANE PORIN - NEISSERIA GONORRHOEAE.
OMA1_NEIGO MAJOR OUTER MEMBRANE PROTEIN PI.A PRECURSOR (PROTEIN IA) (PIA) - NEISSERIA GONORRHOEAE.
OMA1_NEIME MAJOR OUTER MEMBRANE PROTEIN PI.A PRECURSOR (PROTEIN IA) (PIA) - NEISSERIA MENINGITIDIS.
OMA2_NEIME MAJOR OUTER MEMBRANE PROTEIN P.IA PRECURSOR (PROTEIN IA) (PIA) - NEISSERIA MENINGITIDIS.
OMB1_NEIGO MAJOR OUTER MEMBRANE PROTEIN P.IB PRECURSOR (PROTEIN IB) (PIB) (PORIN) - NEISSERIA GONORRHOEAE.
OMB1_NEIME MAJOR OUTER MEMBRANE PROTEIN P.IB PRECURSOR (PROTEIN IB) (PIB) (PORIN) (CLASS 3) - NEISSERIA MENINGITIDIS.
OMB2_NEIGO MAJOR OUTER MEMBRANE PROTEIN P.IB PRECURSOR (PROTEIN IB) (PIB) (PORIN) - NEISSERIA GONORRHOEAE.
OMB2_NEIME MAJOR OUTER MEMBRANE PROTEIN P.IB PRECURSOR (PROTEIN IB) (PIB) (PORIN) (CLASS 3) - NEISSERIA MENINGITIDIS.
OMB3_NEIME MAJOR OUTER MEMBRANE PROTEIN P.IB PRECURSOR (PROTEIN IB) (PIB) (PORIN) (CLASS 3) - NEISSERIA MENINGITIDIS.
OMB4_NEIME MAJOR OUTER MEMBRANE PROTEIN P.IB PRECURSOR (PROTEIN IB) (PIB) (PORIN) (CLASS 3) - NEISSERIA MENINGITIDIS.
OMB_NEILA MAJOR OUTER MEMBRANE PROTEIN P.IB PRECURSOR (PROTEIN IB) (PIB) (PORIN) - NEISSERIA LACTAMICA.
OMB_NEISI MAJOR OUTER MEMBRANE PROTEIN P.IB PRECURSOR (PROTEIN IB) (PIB) (PORIN) - NEISSERIA SICCA.
P95344 OUTER MEMBRANE PROTEIN PIB PRECURSOR - NEISSERIA GONORRHOEAE.
P95345 OUTER MEMBRANE PROTEIN PIB PRECURSOR - NEISSERIA GONORRHOEAE.
P95346 OUTER MEMBRANE PROTEIN PIB PRECURSOR - NEISSERIA GONORRHOEAE.
P95347 OUTER MEMBRANE PROTEIN PIB PRECURSOR - NEISSERIA GONORRHOEAE.
P95348 OUTER MEMBRANE PROTEIN PIB PRECURSOR - NEISSERIA GONORRHOEAE.
P95349 OUTER MEMBRANE PROTEIN PIB PRECURSOR - NEISSERIA GONORRHOEAE.
P95350 OUTER MEMBRANE PROTEIN PIB PRECURSOR - NEISSERIA GONORRHOEAE.
P95351 OUTER MEMBRANE PROTEIN PIB PRECURSOR - NEISSERIA GONORRHOEAE.
P95352 OUTER MEMBRANE PROTEIN PIB PRECURSOR - NEISSERIA GONORRHOEAE.
Q05520 MAJOR OUTER MEMBRANE PROTEIN P.IA PRECURSOR (PROTEIN IA) (PIA) - NEISSERIA MENINGITIDIS.
Q08249 MAJOR OUTER MEMBRANE PROTEIN PI.A PRECURSOR (PROTEIN IA) (PIA) - NEISSERIA GONORRHOEAE.
Q08250 MAJOR OUTER MEMBRANE PROTEIN PI.A PRECURSOR (PROTEIN IA) (PIA) - NEISSERIA GONORRHOEAE.
Q08251 MAJOR OUTER MEMBRANE PROTEIN PI.A PRECURSOR (PROTEIN IA) (PIA) - NEISSERIA GONORRHOEAE.
Q08252 MAJOR OUTER MEMBRANE PROTEIN PI.A PRECURSOR (PROTEIN IA) (PIA) - NEISSERIA GONORRHOEAE.
Q08253 MAJOR OUTER MEMBRANE PROTEIN PI.A PRECURSOR (PROTEIN IA) (PIA) - NEISSERIA GONORRHOEAE.
Q08254 MAJOR OUTER MEMBRANE PROTEIN PI.A PRECURSOR (PROTEIN IA) (PIA) - NEISSERIA GONORRHOEAE.
Q51056 PORIN (PORB) - NEISSERIA GONORRHOEAE.
Q51059 MAJOR OUTER MEMBRANE PROTEIN (PIB) PRECURSOR (PIB) - NEISSERIA GONORRHOEAE.
Q51066 OUTER MEMBRANE PROTEIN IA PRECURSOR - NEISSERIA GONORRHOEAE.
Q51067 OUTER MEMBRANE PROTEIN IA PRECURSOR - NEISSERIA GONORRHOEAE.
Q51068 OUTER MEMBRANE PROTEIN IA PRECURSOR - NEISSERIA GONORRHOEAE.
Q51093 CLASS 3 OUTER MEMBRANE PORIN PRECURSOR - NEISSERIA MENINGITIDIS.
Q51094 CLASS 3 OUTER MEMBRANE PORIN PRECURSOR - NEISSERIA MENINGITIDIS.
Q51095 CLASS 3 OUTER MEMBRANE PORIN PRECURSOR - NEISSERIA MENINGITIDIS.
Q51096 CLASS 3 OUTER MEMBRANE PORIN PRECURSOR - NEISSERIA MENINGITIDIS.
Q51100 CLASS 3 OUTER MEMBRANE PORIN PRECURSOR - NEISSERIA MENINGITIDIS.
Q51240 PORA A CLASS 1 OUTER MEMBRANE PROTEIN (P1.7,16) PRECURSOR (P1.7,16) - NEISSERIA MENINGITIDIS.
Q51261 PORB PROTEIN PRECURSOR - NEISSERIA MENINGITIDIS.
Q51271 SEROTYPE 15 OUTER MEMBRANE PROTEIN - NEISSERIA MENINGITIDIS.
Q57378 CLASS 3 OUTER MEMBRANE PORIN PRECURSOR - NEISSERIA MENINGITIDIS.
Scan History
OWL19_1    2  100  NSINGLE    
OWL25_3 2 250 NSINGLE
SPTR37_9f 2 58 NSINGLE
Initial Motifs
Motif 1  width=26
Element Seqn Id St Int Rpt
DLGSKIGFKGQEDLGNGLKAIWQVEQ JH0254 36 36 -
DFGSKIGFKGQEDFGNGLKAIWQLEQ S21405 55 55 -
DFGSFIGFKGSEDLGEGLKAVWQLEQ NMPORACI 65 65 -
DFGSFIGFKGSEDLGDGLKAVWQLEQ NGOPORA3S 60 60 -

Motif 2 width=20
Element Seqn Id St Int Rpt
WGNRQSFIGLKGGFGKLRVG JH0254 72 10 -
WGNKQSFIGLKGGFGTVRAG S21405 91 10 -
WGNRESFVGLAGEFGTLRAG NMPORACI 102 11 -
WGNRESFIGLAGEFGTLRAG NGOPORA3S 97 11 -

Motif 3 width=18
Element Seqn Id St Int Rpt
SVRYDSPEFAGLSGSVQY JH0254 127 35 -
SVRYDSPEFAGFSGSVQY S21405 150 39 -
SVRYDSPEFSGFSGSVQF NMPORACI 159 37 -
SVRYDSPEFSGFSGSVQF NGOPORA3S 154 37 -

Motif 4 width=18
Element Seqn Id St Int Rpt
ESYHAGFNYKNGGFFVQY JH0254 156 11 -
ESYHVGLNYQNSGFFAQY S21405 178 10 -
DVYYAGLNYKNGGFAGNY NMPORACI 213 36 -
DVYYAGLNYKNGGFAGNY NGOPORA3S 207 35 -

Motif 5 width=21
Element Seqn Id St Int Rpt
QIHRLVSGYDNDALYASVAVQ JH0254 193 19 -
QVHRLVGGYDNDALYASVAVQ S21405 218 22 -
QVHRLTGGYEEGGLNLALAAQ NMPORACI 267 36 -
QVHRLTGGYEEGGLNLALAAQ NGOPORA3S 263 38 -

Motif 6 width=27
Element Seqn Id St Int Rpt
NSQTEVAATLAYRFGNVTPRVSYAHGF JH0254 227 13 -
NSQTEVAATVAYRFGNVTPRVSYAHGF S21405 252 13 -
NSTTEIAATASYRFGNAVPRISYAHGF NMPORACI 299 11 -
NSTTEIAATASYRFGNAVPRISYAHGF NGOPORA3S 295 11 -

Motif 7 width=25
Element Seqn Id St Int Rpt
YDQVVVGAEYDFSKRTSALVSAGWL JH0254 266 12 -
YDQVVVGAEYDFSKRTSALVSAGWL S21405 291 12 -
YDQIIAGVDYDFSKRTSAIVSGAWL NMPORACI 339 13 -
YDQIIAGVDYDFSKRTSAIVSGAWL NGOPORA3S 335 13 -
Final Motifs
Motif 1  width=26
Element Seqn Id St Int Rpt
DLGSKIGFKGQEDLGNGLKAIWQLEQ Q51067 55 55 -
DLGSKIGFKGQEDLGNGLKAIWQLEQ Q51068 55 55 -
DLGSKIGFKGQEDLGNGLKAIWQLEQ O51944 54 54 -
DLGSKIGFKGQEDLGNGLKAIWQLEQ O51948 54 54 -
NLGSKIGFKGQEDLGNGLKAIWQLEQ Q51066 55 55 -
DLGSKIGFKGQEDLGNGLKAIWQLEQ O52693 55 55 -
DLGSKIGFKGQEDLGNGLKAIWQLEQ Q08250 55 55 -
DLGSKIGFKGQEDLGNGLKAIWQLEQ Q08252 55 55 -
DLGSKIGFKGQEDLGNGLKAIWQLEQ Q08253 55 55 -
DLGSKIGFKGQEDLGNGLKAIWQLEQ Q08249 55 55 -
DLGSKIGFKGQEDLGNGLKAIWQLEQ Q51056 55 55 -
DLGSKIGFKGQEDLGNGLKAIWQLEQ Q08254 55 55 -
DLGSKIGFKGQEDLGNGLKAIWQLEQ O51945 54 54 -
DLGSKIGFKGQEDLGNGLKAIWQLEQ Q08251 55 55 -
DFGSKIGFKGQEDLGNGLKAVWQLEQ O52694 55 55 -
DFGSKIGFKGQEDLGNGLKAVWQLEQ O52695 55 55 -
DFGSKIGFKGQEDLGNGLKAVWQLEQ O52696 55 55 -
DFGSKIGFKGQEDLGNGLKAVWQLEQ O52700 55 55 -
DFGSKIGFKGQEDLGNGLKAVWQLEQ P95347 55 55 -
DFGSKIGFKGQEDLGNGLKAVWQLEQ P95344 55 55 -
DFGSKIGFKGQEDLGNGLKAVWQLEQ P95352 55 55 -
DFGSKIGFKGQEDLGNGLKAVWQLEQ P95350 55 55 -
DFGSKIGFKGQEDLGNGLKAVWQLEQ P95345 55 55 -
DFGSKIGFKGQEDLGNGLKAVWQLEQ O08266 55 55 -
DFGSKIGFKGQEDLGNGLKAVWQLEQ O52697 55 55 -
DFGSKIGFKGQEDLGNGLKAVWQLEQ O52698 55 55 -
DFGSKIGFKGQEDLGNGLKAVWQLEQ O52701 55 55 -
DFGSKIGFKGQEDLGNGLKAVWQLEQ OMB1_NEIGO 55 55 -
DFGSKIGFKGQEDLGNGLKAVWQLEQ OMB2_NEIGO 55 55 -
DFGSKIGFKGQEDFGNGLKAIWQLEQ OMB_NEILA 55 55 -
DFGSKIGFKGQEDLGNGLKAVWQLEQ O51943 55 55 -
DLGSKIGFKGQEDLGNGLKAIWQVEQ OMB1_NEIME 55 55 -
DLGSKIGFKGQEDLGNGLKAIWQVEQ OMB4_NEIME 55 55 -
DLGSKIGFKGQEDLGNGLKAIWQVEQ Q51100 55 55 -
DLGSKIGFKGQEDLGNGLKAIWQVEQ Q51271 55 55 -
DLGSKIGFKGQEDLGNGLKAIWQVEQ Q57378 55 55 -
DLGSKIGFKGQEDLGNGLKAIWQLEQ O51946 54 54 -
DFGSKIGFKGQEDLGNGLKAVWQLEQ Q51059 55 55 -
DFGSKIGFKGQEDLGNGLKAVWQLEQ O51947 55 55 -
DFGSKIGFKGQEDLGNGLKAVWQLEQ P95351 55 55 -
DFGSKIGFKGQEDLGNGLKAVWQLEQ P95346 55 55 -
DFGSKIGFKGQEDLGNGLKAIWQLEQ O52699 55 55 -
DFGSKIGFKGQEDLGNGLKAVWQLEQ P95348 55 55 -
DFGSKIGFKGQEDLGNGLKAVWQLEQ P95349 55 55 -
DLGSKIGFKGQEDLGNGLKAIWQVEQ Q51093 55 55 -
DLGSKIGFKGQEDLGNGLKAIWQVEQ Q51261 55 55 -
DLGSKIGFKGQEDLGNGLKAIWQVEQ OMB2_NEIME 55 55 -
DLGSKIGFKGQEDLGNGLKAIWQVEQ OMB3_NEIME 55 55 -
DLGSKIGFKGQEDLGNGLKAIWQVEQ Q51094 55 55 -
DLGSKIGFKGQEDLGNGLKAIWQVEQ Q51096 55 55 -
GLGSKIGFKGQEDLGNGLKAIWQVEH Q51095 55 55 -
DLGSKIGFKGQEDLGNGLKAIWQLEQ OMA1_NEIGO 55 55 -
DFGSFIGFKGSEDLGEGLKAVWQLEQ OMA1_NEIME 70 70 -
DFGSFIGFKGSEDLGDGLKAVWQLEQ Q51240 72 72 -
DFGSFIGFKGSEDLGEGLKAVWQLEQ Q05520 65 65 -
DFGSRIGFKGHEHLSNNLNAIWQVEQ OMB_NEISI 55 55 -
DFGSFIGFKGSEDLGEGLKAVWQLEQ OMA2_NEIME 66 66 -

Motif 2 width=20
Element Seqn Id St Int Rpt
WGNRQSFIGLKGGFGKVRVG Q51067 91 10 -
WGNRQSFIGLKGGFGKVRVG Q51068 91 10 -
WGNRQSFIGLKGGFGKVRVG O51944 90 10 -
WGNRQSFIGLKGGFGKVRVG O51948 90 10 -
WGNRQSFIGLKGGFGKVRVG Q51066 91 10 -
WGSRQSFIGLKGGFGKVRVG O52693 91 10 -
WGSRQSFIGLKGGFGKVRVG Q08250 91 10 -
WGSRQSFIGLKGGFGKVRVG Q08252 91 10 -
WGSRQSFIGLKGGFGKVRVG Q08253 91 10 -
WGNRQSFIGLKGGFGKVRVG Q08249 91 10 -
WGNRQSFIGLKGGFGKVRVG Q51056 91 10 -
WGNRQSFIGLKGGFGKVRVG Q08254 91 10 -
WGNRQSFIGLKGGFGKVRVG O51945 90 10 -
WGNRQSFIGLKGGFGKVRVG Q08251 91 10 -
WGNKQSFIGLKGGFGTIRVG O52694 91 10 -
WGNKQSFIGLKGGFGTIRVG O52695 91 10 -
WGNKQSFIGLKGGFGTIRVG O52696 91 10 -
WGNKQSFIGLKGGFGTIRVG O52700 91 10 -
WGNKQSFIGLKGGFGTIRVG P95347 91 10 -
WGNKQSFVGLKGGFGTIRVG P95344 91 10 -
WGNKQSFVGLKGGFGTIRVG P95352 91 10 -
WGNKQSFVGLKGGFGTIRVG P95350 91 10 -
WGNKQSFVGLKGGFGTIRVG P95345 91 10 -
WGNKQSFVGLKGGFGTIRAG O08266 91 10 -
WGNKQSFVGLKGGFGTIRAG O52697 91 10 -
WGNKQSFVGLKGGFGTIRAG O52698 91 10 -
WGNKQSFVGLKGGFGTIRAG O52701 91 10 -
WGNKQSFVGLKGGFGTIRAG OMB1_NEIGO 91 10 -
WGNKQSFVGLKGGFGTIRAG OMB2_NEIGO 91 10 -
WGNKQSFIGLKGGFGTVRAG OMB_NEILA 91 10 -
WGNKQSFVGLKGGFGTIRVG O51943 91 10 -
WGNRQSFIGLKGGFGKLRVG OMB1_NEIME 91 10 -
WGNRQSFIGLKGGFGKLRVG OMB4_NEIME 91 10 -
WGNRQSFIGLKGGFGKLRVG Q51100 91 10 -
WGNRQSFIGLKGGFGKLRVG Q51271 91 10 -
WGNRQSFIGLKGGFGKLRVG Q57378 91 10 -
WDNRQSFIGLKGGFGKVRVG O51946 90 10 -
WGNKQSFVGLKGGFGTIRAG Q51059 91 10 -
WGNKQSFVGLKGGFGTIRAG O51947 91 10 -
WGNKQSFVGLKGGFGTIRAG P95351 91 10 -
WGNKQSFIGLKGGFGTIRVG P95346 91 10 -
WGNKQSFIGLKGGFGTIRAG O52699 91 10 -
WGNKQSFVGLKGGFGTIRAG P95348 91 10 -
WGNKQSFVGLKGGFGTIRAG P95349 91 10 -
WGNRQSFIGLKGGFGKLRVG Q51093 91 10 -
WGNRQSFIGLKGGFGKLRVG Q51261 91 10 -
WGNRQSFIGLKGGFGKLRVG OMB2_NEIME 91 10 -
WGNRQSFIGLKGGFGKLRVG OMB3_NEIME 91 10 -
WGNRQSFIGLKGGFGKLRVG Q51094 91 10 -
WGNRQSFIGLKGGFGKLRVG Q51096 91 10 -
WGNRQSFIGLKGGFGKLRVG Q51095 91 10 -
WGNRQSFIGLKGGFGKVRVG OMA1_NEIGO 91 10 -
WGNRESFIGLAGEFGTLRAG OMA1_NEIME 107 11 -
WGNRESFIGLAGEFGTLRAG Q51240 109 11 -
WGNRESFVGLAGEFGTLRAG Q05520 102 11 -
WGTRESFIGLEGGFGKVRAG OMB_NEISI 91 10 -
WGNRESFVGLAGEFGTLRAG OMA2_NEIME 103 11 -

Motif 3 width=18
Element Seqn Id St Int Rpt
SVRYDSPEFAGFSGSVQY Q51067 146 35 -
SVRYDSPEFAGFSGSVQY Q51068 146 35 -
SVRYDSPEFAGFSGSVQY O51944 145 35 -
SVRYDSPEFAGFSGSVQY O51948 145 35 -
SVRYDSPEFAGFSGSVQY Q51066 146 35 -
SVRYDSPEFAGFSGSVQY O52693 146 35 -
SVRYDSPEFAGFSGSVQY Q08250 146 35 -
SVRYDSPEFAGFSGSVQY Q08252 146 35 -
SVRYDSPEFAGFSGSVQY Q08253 146 35 -
SVRYDSPEFAGFSGSVQY Q08249 146 35 -
SVRYDSPEFAGFSGSVQY Q51056 146 35 -
SVRYDSPEFAGFSASVQY Q08254 146 35 -
SVRYDSPEFAGFSGSVQY O51945 145 35 -
SVRYDSPEFAGFSGSVQY Q08251 146 35 -
SARYDSPEFAGFSGSVQY O52694 150 39 -
SARYDSPEFAGFSGSVQY O52695 150 39 -
SARYDSPEFAGFSGSVQY O52696 150 39 -
SARYDSPEFAGFSGSVQY O52700 150 39 -
SARYDSPEFAGFSGSVQY P95347 150 39 -
SARYDSPEFAGFSGSVQY P95344 150 39 -
SARYDSPEFAGFSGSVQY P95352 150 39 -
SARYDSPEFAGFSGSVQY P95350 150 39 -
SARYDSPEFAGFSGSVQY P95345 150 39 -
SVRYDSPEFAGFSGSVQY O08266 150 39 -
SVRYDSPEFAGFSGSVQY O52697 150 39 -
SVRYDSPEFAGFSGSVQY O52698 150 39 -
SVRYDSPEFAGFSGSVQY O52701 150 39 -
SVRYDSPEFAGFSGSVQY OMB1_NEIGO 150 39 -
SVRYDSPEFAGFSGSVQY OMB2_NEIGO 150 39 -
SVRYDSPEFAGFSGSVQY OMB_NEILA 150 39 -
SARYDSPEFAGFSGSVQY O51943 150 39 -
SVRYDSPEFAGLSGSVQY OMB1_NEIME 146 35 -
SVRYDSPEFAGLSGSVQY OMB4_NEIME 146 35 -
SVRYDSPEFAGLSGSVQY Q51100 146 35 -
SVRYDSPEFAGLSGSVQY Q51271 146 35 -
SVRYDSPEFAGLSGSVQY Q57378 146 35 -
SVRYDSPEFAGFSGSVQY O51946 145 35 -
SVRYDSPEFAGFSGSVQY Q51059 150 39 -
SVRYDSPEFAGFSGSVQY O51947 150 39 -
SVRYDSPEFAGFSGSVQY P95351 150 39 -
SARYDSPEFGGFSGSVQY P95346 150 39 -
SARYDSPEFAGFSGSVQY O52699 150 39 -
SARYDSPEFAGFSGSVQY P95348 150 39 -
SARYDSPEFAGFSGSVQY P95349 150 39 -
SVRYDSPEFAGLSGSVQY Q51093 146 35 -
SVRYDSPEFAGLSGSVQY Q51261 146 35 -
SVRYDSPEFAGLSGSVQY OMB2_NEIME 146 35 -
SVRYDSPEFAGLSGSVQY OMB3_NEIME 146 35 -
SVRYDSPEFAGLSGSVQY Q51094 146 35 -
SVRYDSPEFAGLSGSVQY Q51096 146 35 -
SVRYDSPEFAGLSGSVQY Q51095 146 35 -
SVRYDSPEFAGFRAVQYV OMA1_NEIGO 146 35 -
SVRYDSPEFSGFSGSVQF OMA1_NEIME 164 37 -
SVRYDSPEFSGFSGSVQF Q51240 166 37 -
SVRYDSPEFSGFSGSVQF Q05520 159 37 -
SVRYDSPVFAGFSASAQY OMB_NEISI 150 39 -
SVRYDSPDFSGFSGSVQF OMA2_NEIME 160 37 -

Motif 4 width=18
Element Seqn Id St Int Rpt
ESYHAGFNYKNSGFFVQY Q51067 175 11 -
ESYHAGFNYKNSGFFVQY Q51068 175 11 -
ESYHAGFNYKNSGFFVQY O51944 174 11 -
ESYHAGFNYKNSGFFVQY O51948 174 11 -
ESYHAGFNYKNSGFFVQY Q51066 175 11 -
ESYHAGFNYKNSGFFVQY O52693 175 11 -
ESYHAGFNYKNSGFFVQY Q08250 175 11 -
ESYHAGFNYKNSGFFVQY Q08252 175 11 -
ESYHAGFNYKNSGFFVQY Q08253 175 11 -
ESYHAGFNYKNSGFFVQY Q08249 175 11 -
ESYHAGFNYKNSGFFVQY Q51056 175 11 -
ESYHAGFNYKNSGFFVQY Q08254 175 11 -
ESYHAGFNYKNSGFFVQY O51945 174 11 -
ESYHAGFNYKNSGFFVQY Q08251 175 11 -
ESYHVGLNYRNGGFFAQY O52694 178 10 -
ESYHVGLNYRNGGFFAQY O52695 178 10 -
ESYHVGLNYRNGGFFAQY O52696 178 10 -
ESYHVGLNYRNGGFFAQY O52700 178 10 -
ESYHVGLNYRNGGFFAQY P95347 178 10 -
ESYHVGLNYRNGGFFAQY P95344 178 10 -
ESYHVGLNYRNGGFFAQY P95352 178 10 -
ESYHVGLNYRNGGFFAQY P95350 178 10 -
ESYHVGLNYRNGGFFAQY P95345 178 10 -
ESYHVGLNYQNSGFFAQY O08266 178 10 -
ESYHVGLNYQNSGFFAQY O52697 178 10 -
ESYHVGLNYQNSGFFAQY O52698 178 10 -
ESYHVGLNYQNSGFFAQY O52701 178 10 -
ESYHVGLNYQNSGFFAQY OMB1_NEIGO 178 10 -
ESYHVGLNYQNSGFFAQY OMB2_NEIGO 178 10 -
ESYHVGLNYQNSGFFAQY OMB_NEILA 178 10 -
ESYHVGLNYRNGGFFAQY O51943 178 10 -
ESYHAGFNYKNGGFFVQY OMB1_NEIME 175 11 -
ESYHAGFNYKNGGFFVQY OMB4_NEIME 175 11 -
ESYHAGFNYKNGGFFVQY Q51100 175 11 -
ESYHAGFNYKNGGFFVQY Q51271 175 11 -
ESYHAGFNYKNGGFFVQY Q57378 175 11 -
ESYHAGFNYKNSGFFVQY O51946 174 11 -
ESYHVGLNYQNSGFFAQY Q51059 178 10 -
ESYHVGLNYRNNGFFAQY O51947 178 10 -
ESYHVGLNYRNNGFFAQY P95351 178 10 -
ESYHVGLNYRNGGFFAQY P95346 178 10 -
ESYHVGLNYRNNGFFAQY O52699 178 10 -
ESYHVGLNYQNSGFFAQY P95348 178 10 -
ESYHVGLNYQNSGFFAQY P95349 178 10 -
ESYHAGFNYKNGGFFMQY Q51093 175 11 -
ESYHAGFNYKNGGFFMQY Q51261 175 11 -
ESYHAGFNYKNGGFFVQY OMB2_NEIME 175 11 -
ESYHAGFNYKNGGFFVQY OMB3_NEIME 175 11 -
ESYHAGFNYKNGGFFVQY Q51094 175 11 -
ESYHAGFNYKNGGFFVQY Q51096 175 11 -
ESYHAGFNYKNGGFFVQY Q51095 175 11 -
ESYHAGFNYKNSGFFVQY OMA1_NEIGO 174 10 -
DVYYAGLNYKNGGFAGNY OMA1_NEIME 217 35 -
DVYYAGLNYKNGGFAGNY Q51240 219 35 -
DVYYAGLNYKNGGFAGNY Q05520 213 36 -
HSFDLGLNYENSGFFGRY OMB_NEISI 187 19 -
DVYYAGLNYKNGGFAGSY OMA2_NEIME 212 34 -

Motif 5 width=21
Element Seqn Id St Int Rpt
QVHRLVGGYDHDALYASVAVQ Q51067 207 14 -
QVHRLVGGYDHDALYASVAVQ Q51068 207 14 -
QVHRLVGGYDHDALYASVAVQ O51944 206 14 -
QVHRLVGGYDHDALYASVAVQ O51948 206 14 -
QVHRLVGGYDHDALYASVAVQ Q51066 207 14 -
QVHRLVGGYDHDALYASVAVQ O52693 207 14 -
QVHRLVGGYDHDALYASVAVQ Q08250 207 14 -
QVHRLVGGYDHDALYASVAVQ Q08252 207 14 -
QVHRLVGGYDHDALYASVAVQ Q08253 207 14 -
QVHRLVGGYDHDALYASVAVQ Q08249 207 14 -
QVHRLVGGYDHDALYASVAVQ Q51056 207 14 -
QVHRLVGGYDHDALYASVAVQ Q08254 207 14 -
QIHRLVGGYDHDALYASVAVQ O51945 206 14 -
QIHRLVGGYDHDALYASVAVQ Q08251 207 14 -
QVHRLVGGYDNNALYASVAAQ O52694 227 31 -
QVHRLVGGYDNNALYASVAAQ O52695 227 31 -
QVHRLVGGYDNNALYASVAAQ O52696 227 31 -
QVHRLVGGYDNNALYASVAAQ O52700 227 31 -
QVHRLVGGYDNNALYASVAAQ P95347 227 31 -
QVHRLVGGYDNNALYASVAAQ P95344 227 31 -
QVHRLVGGYDNNALYASVAAQ P95352 227 31 -
QVHRLVGGYDNNALYASVAAQ P95350 227 31 -
QVHRLVGGYDNNALYASVAAQ P95345 227 31 -
QVHRLVGGYDNNALYVSVAAQ O08266 227 31 -
QVHRLVGGYDNNALYVSVAAQ O52697 227 31 -
QVHRLVGGYDNNALYVSVAAQ O52698 227 31 -
QVHRLVGGYDNNALYVSVAAQ O52701 227 31 -
QVHRLVGGYDNNALYVSVAAQ OMB1_NEIGO 227 31 -
QVHRLVGGYDNNALYVSVAAQ OMB2_NEIGO 227 31 -
QVHRLVGGYDNDALYASVAVQ OMB_NEILA 218 22 -
QVHRLVGGYDHDALYASVAVQ O51943 227 31 -
QIHRLVSGYDNDALYASVAVQ OMB1_NEIME 212 19 -
QIHRLVSGYDNDALYASVAVQ OMB4_NEIME 212 19 -
QIHRLVSGYDNDALYASVAVQ Q51100 212 19 -
QIHRLVSGYDNDALYASVAVQ Q51271 212 19 -
QIHRLVSGYDNDALYASVAVQ Q57378 212 19 -
QIHRLVGGYDHDALYASVAVQ O51946 206 14 -
QVHRLVGGYDNNALYVSVAAQ Q51059 227 31 -
QVHRLVGGYDNNALYVSVAAQ O51947 218 22 -
QVHRLVGGYDNNALYVSVAAQ P95351 227 31 -
QVHRLVGGYDNNALYASVAAQ P95346 227 31 -
QVHRLVGGYDNNALYVSVAAQ O52699 225 29 -
QVHRLVGGYDNNALYVSVAAQ P95348 227 31 -
QVHRLVGGYDNNALYVSVAAQ P95349 227 31 -
QIHRLVSGYDNDALYASVAVQ Q51093 211 18 -
QIHRLVSGYDNDALYASVAVQ Q51261 211 18 -
QIHRLVSGYDNDALHASVAVQ OMB2_NEIME 212 19 -
QIHRLVSGYDNDALHASVAVQ OMB3_NEIME 212 19 -
QIHRLVSGYDNDALHASVAVQ Q51094 211 18 -
QIHRLVSGYDNDALHASVAVQ Q51096 211 18 -
QIHRLVSGYDNDALYASVAVQ Q51095 212 19 -
QVHRLVGGYDHDALYASVAVQ OMA1_NEIGO 206 14 -
QVHRLTGGYEEGGLNLALAAQ OMA1_NEIME 272 37 -
QVHRLTGGYEEGGLNLALAAQ Q51240 273 36 -
QVHRLTGGYEEGGLNLALAAQ Q05520 267 36 -
QAHRLVGGYDANNVLVSVAGQ OMB_NEISI 237 32 -
QVHRLTGGYEEGGLNLALAAQ OMA2_NEIME 266 36 -

Motif 6 width=27
Element Seqn Id St Int Rpt
NSQTEVAATAAYRFGNVTPRVSYAHGF Q51067 242 14 -
NSQTEVAATAAYRFGNVTPRVSYAHGF Q51068 242 14 -
NSQTEVAATVAYRFGNVTPRVSYAHGF O51944 241 14 -
NSQTEVAATVAYRFGNVTPRVSYAHGF O51948 241 14 -
NSQTEVAATAAYRFGNVTPRVSYAHGF Q51066 242 14 -
NSQTEVAATAAYRFGNVTPRVSYAHGF O52693 242 14 -
NSQTEVAATAAYRFGNVTPRVSYAHGF Q08250 242 14 -
NSQTEVAATAAYRFGNVTPRVSYAHGF Q08252 242 14 -
NSQTEVAATAAYRFGNVTPRVSYAHGF Q08253 242 14 -
NSQTEVATTVAYRFGNVTPRVSYAHGF Q08249 242 14 -
NSQTEVATTVAYRFGNVTPRVSYAHGF Q51056 242 14 -
NSQTEVAATAAYRFGNVTPRVSYAHGF Q08254 242 14 -
NSQTEVAATVAYRFGNLTPRVSYAHGF O51945 241 14 -
NSQTEVATTVAYRFGNVTPRVSYAHGF Q08251 242 14 -
NSQTEVAATAAYRFGNLTPRVSYAHGF O52694 263 15 -
NSQTEVAATAAYRFGNLTPRVSYAHGF O52695 263 15 -
NSQTEVAATAAYRFGNLTPRVSYAHGF O52696 263 15 -
NSQTEVAATAAYRFGNLTPRVSYAHGF O52700 263 15 -
NSQTEVAATAAYRFGNLTPRVSYAHGF P95347 263 15 -
NSQTEVAATAAYRFGNLTPRVSYAHGF P95344 263 15 -
NSQTEVAATAAYRFGNLTPRVSYAHGF P95352 263 15 -
NSQTEVAATAAYRFGNLTPRVSYAHGF P95350 263 15 -
NSQTEVAATAAYRFGNLTPRVSYAHGF P95345 263 15 -
NSQTEVAATAAYRFGNVTPRVSYAHGF O08266 263 15 -
NSQTEVAATAAYRFGNVTPRVSYAHGF O52697 263 15 -
NSQTEVAATAAYRFGNVTPRVSYAHGF O52698 263 15 -
NSQTEVAATAAYRFGNVTPRVSYAHGF O52701 263 15 -
NSQTEVAATAAYRFGNVTPRVSYAHGF OMB1_NEIGO 263 15 -
NSQTEVAATAAYRFGNVTPRVSYAHGF OMB2_NEIGO 263 15 -
NSQTEVAATVAYRFGNVTPRVSYAHGF OMB_NEILA 252 13 -
NSQTEVAATAAYRFGNLTPRVSYAHGF O51943 262 14 -
NSQTEVAATLAYRFGNVTPRVSYAHGF OMB1_NEIME 246 13 -
NSQTEVAATLAYRFGNVTPRVSYAHGF OMB4_NEIME 246 13 -
NSQTEVAATLAYRFGNVTPRVSYAHGF Q51100 247 14 -
NSQTEVAATLAYRFGNVTPRVSYAHGF Q51271 246 13 -
NSQTEVAATLAYRFGNVTPRVSYAHGF Q57378 247 14 -
NSQTEVAATVAYRFGNLTPRVSYAHGF O51946 241 14 -
NSQTEVAATVAYRFGNVTPRVSYAHGF Q51059 265 17 -
NSQTEVAATAAYRFGNVTPRVSYAHGF O51947 254 15 -
NSQTEVAATAAYRFGNVTPRVSYAHGF P95351 263 15 -
NSQTEVAATAAYRFGNLTPRVSYAHGF P95346 263 15 -
NSQTEVAATAAYRFGNVTPRVSYAHGF O52699 261 15 -
NSQTEVAATAAYRFGNVTPRVSYAHGF P95348 263 15 -
NSQTEVAATAAYRFGNVTPRVSYAHGF P95349 263 15 -
NSQTEVAATLAYRFGNVTPRVSYAHGF Q51093 244 12 -
NSQTEVAATLAYRFGNVTPRVSYAHGF Q51261 244 12 -
NSQTEVAATLAYRFGNVTPRVSYAHGF OMB2_NEIME 246 13 -
NSQTEVAATLAYRFGNVTPRVSYAHGF OMB3_NEIME 246 13 -
NSQTEVAATLAYRFGNVTPRVSYAHGF Q51094 245 13 -
NSQTEVAATLAYRFGNVTPRVSYAHGF Q51096 245 13 -
NSQTEVAATLAYRFGNVTPRVSYAHGF Q51095 247 14 -
NSQTEVAATAAYRFGNVTPRVSYAHGF OMA1_NEIGO 241 14 -
NSTTEIAATASYRFGNAVPRISYAHGF OMA1_NEIME 306 13 -
NSTTEIAATASYRFGNAVPRISYAHGF Q51240 305 11 -
NSTTEIAATASYRFGNAVPRISYAHGF Q05520 299 11 -
NERTEVAVTGGYRMGNVMPRLSYAHGF OMB_NEISI 271 13 -
NSTTEIAATASYRFGNAVPRISYAHGF OMA2_NEIME 300 13 -

Motif 7 width=25
Element Seqn Id St Int Rpt
YDQVVVGAEYDFSKRTSALVSAGWL Q51067 281 12 -
YDQVVVGAEYDFSKRTSALVSAGWL Q51068 281 12 -
YDQVVVGAEYDFSKRTSALVSAGWL O51944 280 12 -
YDQVVVGAEYDFSKRTSALVSAGWL O51948 280 12 -
YDQVVVGAEYDFSKRTSALVSAGWL Q51066 281 12 -
YDQVVVGAEYDFSKRTSALVSAGWL O52693 281 12 -
YDQVVVGAEYDFSKRTSALVSAGWL Q08250 281 12 -
YDQVVVGAEYDFSKRTSALVSAGWL Q08252 281 12 -
YDQVVVGAEYDFSKRTSALVSAGWL Q08253 281 12 -
YDQVVVGAEYDFSKRTSALVSAGWL Q08249 281 12 -
YDQVVVGAEYDFSKRTSALVSAGWL Q51056 281 12 -
YDQVVVGAEYDFSKRTSALVSAGWL Q08254 281 12 -
YDQVVVGAEYDFSKRTSALVSAGWL O51945 280 12 -
YDQVVVGAEYDFSKRTSALVSAGWL Q08251 281 12 -
YDQVVVGAEYDFSKRTSALVSAGWL O52694 302 12 -
YDQVVVGAEYDFSKRTSALVSAGWL O52695 302 12 -
YDQVVVGAEYDFSKRTSALVSAGWL O52696 302 12 -
YDQVVVGAEYDFSKRTSALVSAGWL O52700 302 12 -
YDQVVVGAEYDFSKRTSALVSAGWL P95347 302 12 -
YDQVVVGAEYDFSKRTSALVSAGWL P95344 302 12 -
YDQVVVGAEYDFSKRTSALVSAGWL P95352 302 12 -
YDQVVVGAEYDFSKRTSALVSAGWL P95350 302 12 -
YDQVVVGAEYDFSKRTSALVSAGWL P95345 302 12 -
YDQVVVGAEYDFSKRTSALVSAGWL O08266 302 12 -
YDQVVVGAEYDFSKRTSALVSAGWL O52697 302 12 -
YDQVVVGAEYDFSKRTSALVSAGWL O52698 302 12 -
YDQVVVGAEYDFSKRTSALVSAGWL O52701 302 12 -
YDQVVVGAEYDFSKRTSALVSAGWL OMB1_NEIGO 302 12 -
YDQVVVGAEYDFSKRTSALVSAGWL OMB2_NEIGO 302 12 -
YDQVVVGAEYDFSKRTSALVSAGWL OMB_NEILA 291 12 -
YDQVVVGAEYDFSKRTSALVSAGWL O51943 301 12 -
YDQVVVGAEYDFSKRTSALVSAGWL OMB1_NEIME 285 12 -
YDQVVVGAEYDFSKRTSALVSAGWL OMB4_NEIME 285 12 -
YDQVVVGAEYDFSKRTSALVSAGWL Q51100 286 12 -
YDQVVVGAEYDFSKRTSALVSAGWL Q51271 285 12 -
YDQVVVGAEYDFSKRTSALVSAGWL Q57378 286 12 -
YDQVVVGAEYDFSKRTSALVSAGWL O51946 280 12 -
YDQVVVGAEYDFSKRTSALVSAGWL Q51059 304 12 -
YDQVVVGAEYDFSKRTSALVSAGWL O51947 293 12 -
YDQVVVGAEYDFSKRTSALVSAGWL P95351 302 12 -
YDQVVVGAEYDFSKRTSALVSAGWL P95346 302 12 -
YDQVVVGAEYDFSKRTSALVSAGWL O52699 300 12 -
YDQVVVGAEYDFSKRTSALVSAGWL P95348 302 12 -
YDQVVVGAEYDFSKRTSALVSAGWL P95349 302 12 -
YDQVVVGAEYDFSKRTSALVSAGWL Q51093 283 12 -
YDQVVVGAEYDFSKRTSALVSAGWL Q51261 283 12 -
YDQVVVGAEYDFSKRTSALVSAGWL OMB2_NEIME 285 12 -
YDQVVVGAEYDFSKRTSALVSAGWL OMB3_NEIME 285 12 -
YDQVVVGAEYDFSKRTSALVSAGWL Q51094 284 12 -
YDQVVVGAEYDFSKRTSALVSAGWL Q51096 284 12 -
YDQVVVGAEYDFSKRTSVLVSAGWL Q51095 286 12 -
YDQVVVGAEYDFSKRTSALVSAGWL OMA1_NEIGO 280 12 -
YDQIIAGVDYDFSKRTSAIVSGAWL OMA1_NEIME 346 13 -
YDQIIAGVDYDFSKRTSAIVSGAWL Q51240 345 13 -
YDQIIAGVDYDFSKRTSAIVSGAWL Q05520 339 13 -
YNQVIVGADYDFSKRTSALVSAGWL OMB_NEISI 311 13 -
YDQIIAGVDYDFSKRTSAIVSGAWL OMA2_NEIME 340 13 -