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PR00106

Identifier
DNAPOLB  [View Relations]  [View Alignment]  
Accession
PR00106
No. of Motifs
3
Creation Date
02-AUG-1991  (UPDATE 14-JUN-1999)
Title
DNA-directed DNA-polymerase family B signature
Database References
PRINTS; PR90005 DNADNAPOL
PROSITE; PS00116 DNA_POLYMERASE_B
BLOCKS; BL00116
PFAM; PF00136 DNA_pol_B
INTERPRO; IPR002064
Literature References
1. JUNG, G., LEAVITT, M.C., HSIEH, J-C. AND ITO, J.
Bacteriophage PRD1 DNA polymerase: Evolution of DNA polymerases.
PROC.NATL.ACAD.SCI.U.S.A. 84 8287-8291 (1987).
 
2. SPICER, E.K., RUSH, J., FUNG, C., REHA-KRANTZ, L.J., KARAM, J.D.
AND KONIGSBERG, W.H.
Primary structure of T4 DNA polymerase. Evolutionary relatedness to
eucaryotic and other procaryotic DNA polymerases.
J.BIOL.CHEM. 263 7478-7486 (1988).

Documentation
DNA is the biological information that instructs cells how to exist in an
ordered fashion: accurate replication is thus one of the most important
events in the life cycle of a cell. This function is performed by DNA-
directed DNA-polymerases by adding nucleotide triphosphate (dNTP) residues 
to the 5'-end of the growing chain of DNA, using a complementary DNA chain 
as a template. Small RNA molecules are generally used as primers for chain 
elongation, although terminal proteins may also be used. Even though there 
are 2 different methods of priming, these are mediated by 2 very similar 
polymerases with similar methods of chain elongation. 
 
There are 2 distinct classes of DNA-directed DNA-polymerase, A and B, 
defined according to sequence similarity criteria. All sequences in the B
family contain a characteristic DTDS motif, and possess many functional
domains, including a 5'-3' elongation domain, a 3'-5' exonuclease domain,
a DNA binding domain, and binding domains for both dNTP's and pyrophosphate.
 
DNAPOLB is a 3-element fingerprint that provides a signature for class
B polymerases. The fingerprint was derived from an initial alignment of 5
sequences: the motifs correspond to the conserved regions described by
Jung et al. [1], motif 3 containing the DTDS motif, which is universally
conserved in B DNA-polymerases (cf. PROSITE pattern DNA_POLYMERASE_B). 
Three iterations on OWL12.0 were required to reach convergence, at which
point a true set comprising 40 sequences was identified. Three partial
matches were also found: of these, all are family members, but 2 (HS5DNAPOL
and S06416) are truncated sequences, HS5DNAPOL ending just after the
C-terminus of the second motif, and S06416 lacking the first motif;
DPO2_KLULA is a complete sequence, but fails to make a significant match
with motif 2.
 
An update on SPTR37_9f identified a true set of 134 sequences, and 10
partial matches.
Summary Information
 134 codes involving  3 elements
10 codes involving 2 elements
Composite Feature Index
3134134134
2875
123
True Positives
DPO1_KLULA    DPO1_SULOH    DPO1_SULSO    DPO2_ECOLI    
DPOA_DROME DPOA_HUMAN DPOA_LEIDO DPOA_MOUSE
DPOA_ORYSA DPOA_OXYNO DPOA_OXYTR DPOA_SCHPO
DPOA_TRYBB DPOA_YEAST DPOD_BOVIN DPOD_CANAL
DPOD_DROME DPOD_HUMAN DPOD_MESAU DPOD_MOUSE
DPOD_PLAFK DPOD_RAT DPOD_SCHPO DPOD_SOYBN
DPOD_YEAST DPOE_HUMAN DPOE_SCHPO DPOE_YEAST
DPOL_ADE02 DPOL_ADE04 DPOL_ADE05 DPOL_ADE07
DPOL_ADE12 DPOL_ADE40 DPOL_ADEB2 DPOL_ADEB3
DPOL_ADECC DPOL_ADECT DPOL_ADEG1 DPOL_ARCFU
DPOL_ASFB7 DPOL_ASFL6 DPOL_BPB03 DPOL_BPM2
DPOL_BPPH2 DPOL_BPPRD DPOL_BPPZA DPOL_BPR69
DPOL_BPT4 DPOL_CBEPV DPOL_CHVN2 DPOL_CHVP1
DPOL_EBV DPOL_FOWPV DPOL_GPCMV DPOL_HCMVA
DPOL_HSV11 DPOL_HSV1A DPOL_HSV1K DPOL_HSV1S
DPOL_HSV21 DPOL_HSV6U DPOL_HSV7J DPOL_HSVE2
DPOL_HSVEB DPOL_HSVI1 DPOL_HSVSA DPOL_MCMVS
DPOL_METJA DPOL_METTH DPOL_METVO DPOL_NPVAC
DPOL_NPVBM DPOL_NPVCF DPOL_NPVLD DPOL_NPVOP
DPOL_ORFN2 DPOL_PYRAB DPOL_PYRFU DPOL_PYRHO
DPOL_PYRSD DPOL_PYRSE DPOL_RCMVM DPOL_RHCM6
DPOL_RSIV DPOL_SULAC DPOL_THES9 DPOL_VACCC
DPOL_VACCV DPOL_VARV DPOL_VZVD DPOM_CLAPU
DPOM_MAIZE DPOM_NEUCR DPOM_NEUIN DPOM_PODAN
DPOZ_HUMAN DPOZ_YEAST O03684 O11414
O36363 O36638 O39234 O39272
O40915 O41930 O57191 O62074
O62218 O64795 O74046 O74719
O77034 O78938 O92787 O92827
O93043 P77933 P88907 P89285
P89453 P90829 Q01140 Q35599
Q37989 Q38545 Q59690 Q59691
Q69281 Q82482 Q86992 Q89604
Q96206 Q98207
True Positive Partials
Codes involving 2 elements
DPO2_KLULA DPOL_THEFM DPOL_THELI DPOL_THEST
DPOM_ASCIM O21376 O61796 Q09038
Q35590 Q39432
Sequence Titles
DPO1_KLULA  DNA POLYMERASE (EC 2.7.7.7) - KLUYVEROMYCES LACTIS (YEAST). 
DPO1_SULOH DNA POLYMERASE I (EC 2.7.7.7) (DNA POLYMERASE B1) - SULFURISPHAERA OHWAKUENSIS.
DPO1_SULSO DNA POLYMERASE I (EC 2.7.7.7) - SULFOLOBUS SOLFATARICUS.
DPO2_ECOLI DNA POLYMERASE II (EC 2.7.7.7) (POL II) - ESCHERICHIA COLI.
DPOA_DROME DNA POLYMERASE ALPHA CATALYTIC SUBUNIT (EC 2.7.7.7) - DROSOPHILA MELANOGASTER (FRUIT FLY).
DPOA_HUMAN DNA POLYMERASE ALPHA CATALYTIC SUBUNIT (EC 2.7.7.7) - HOMO SAPIENS (HUMAN).
DPOA_LEIDO DNA POLYMERASE ALPHA CATALYTIC SUBUNIT (EC 2.7.7.7) - LEISHMANIA DONOVANI.
DPOA_MOUSE DNA POLYMERASE ALPHA CATALYTIC SUBUNIT (EC 2.7.7.7) - MUS MUSCULUS (MOUSE).
DPOA_ORYSA DNA POLYMERASE ALPHA CATALYTIC SUBUNIT (EC 2.7.7.7) - ORYZA SATIVA (RICE).
DPOA_OXYNO DNA POLYMERASE ALPHA CATALYTIC SUBUNIT (EC 2.7.7.7) - OXYTRICHA NOVA.
DPOA_OXYTR DNA POLYMERASE ALPHA CATALYTIC SUBUNIT (EC 2.7.7.7) - OXYTRICHA TRIFALLAX.
DPOA_SCHPO DNA POLYMERASE ALPHA CATALYTIC SUBUNIT (EC 2.7.7.7) (DNA POLYMERASE I) - SCHIZOSACCHAROMYCES POMBE (FISSION YEAST).
DPOA_TRYBB DNA POLYMERASE ALPHA CATALYTIC SUBUNIT (EC 2.7.7.7) (DNA POLYMERASE I) - TRYPANOSOMA BRUCEI BRUCEI.
DPOA_YEAST DNA POLYMERASE ALPHA CATALYTIC SUBUNIT (EC 2.7.7.7) (DNA POLYMERASE I) - SACCHAROMYCES CEREVISIAE (BAKER'S YEAST).
DPOD_BOVIN DNA POLYMERASE DELTA CATALYTIC CHAIN (EC 2.7.7.7) - BOS TAURUS (BOVINE).
DPOD_CANAL DNA POLYMERASE DELTA LARGE CHAIN (EC 2.7.7.7) (DNA POLYMERASE III) - CANDIDA ALBICANS (YEAST).
DPOD_DROME DNA POLYMERASE DELTA CATALYTIC CHAIN (EC 2.7.7.7) - DROSOPHILA MELANOGASTER (FRUIT FLY).
DPOD_HUMAN DNA POLYMERASE DELTA CATALYTIC CHAIN (EC 2.7.7.7) - HOMO SAPIENS (HUMAN).
DPOD_MESAU DNA POLYMERASE DELTA CATALYTIC CHAIN (EC 2.7.7.7) - MESOCRICETUS AURATUS (GOLDEN HAMSTER).
DPOD_MOUSE DNA POLYMERASE DELTA CATALYTIC CHAIN (EC 2.7.7.7) - MUS MUSCULUS (MOUSE).
DPOD_PLAFK DNA POLYMERASE DELTA CATALYTIC CHAIN (EC 2.7.7.7) - PLASMODIUM FALCIPARUM (ISOLATE K1 / THAILAND).
DPOD_RAT DNA POLYMERASE DELTA CATALYTIC CHAIN (EC 2.7.7.7) - RATTUS NORVEGICUS (RAT).
DPOD_SCHPO DNA POLYMERASE DELTA LARGE CHAIN (EC 2.7.7.7) (DNA POLYMERASE III) - SCHIZOSACCHAROMYCES POMBE (FISSION YEAST).
DPOD_SOYBN DNA POLYMERASE DELTA CATALYTIC CHAIN (EC 2.7.7.7) - GLYCINE MAX (SOYBEAN).
DPOD_YEAST DNA POLYMERASE DELTA LARGE CHAIN (EC 2.7.7.7) (DNA POLYMERASE III) - SACCHAROMYCES CEREVISIAE (BAKER'S YEAST).
DPOE_HUMAN DNA POLYMERASE EPSILON, CATALYTIC SUBUNIT A (EC 2.7.7.7) (DNA POLYMERASE II SUBUNIT A) - HOMO SAPIENS (HUMAN).
DPOE_SCHPO DNA POLYMERASE EPSILON, CATALYTIC SUBUNIT A (EC 2.7.7.7) (DNA POLYMERASE II SUBUNIT A) - SCHIZOSACCHAROMYCES POMBE (FISSION YEAST).
DPOE_YEAST DNA POLYMERASE EPSILON, CATALYTIC SUBUNIT A (EC 2.7.7.7) (DNA POLYMERASE II SUBUNIT A) - SACCHAROMYCES CEREVISIAE (BAKER'S YEAST).
DPOL_ADE02 DNA POLYMERASE (EC 2.7.7.7) - HUMAN ADENOVIRUS TYPE 2.
DPOL_ADE04 DNA POLYMERASE (EC 2.7.7.7) - HUMAN ADENOVIRUS TYPE 4.
DPOL_ADE05 DNA POLYMERASE (EC 2.7.7.7) - HUMAN ADENOVIRUS TYPE 5.
DPOL_ADE07 DNA POLYMERASE (EC 2.7.7.7) - HUMAN ADENOVIRUS TYPE 7.
DPOL_ADE12 DNA POLYMERASE (EC 2.7.7.7) - HUMAN ADENOVIRUS TYPE 12.
DPOL_ADE40 DNA POLYMERASE (EC 2.7.7.7) - HUMAN ADENOVIRUS TYPE 40.
DPOL_ADEB2 DNA POLYMERASE (EC 2.7.7.7) - BOVINE ADENOVIRUS TYPE 2 (MASTADENOVIRUS BOS2).
DPOL_ADEB3 DNA POLYMERASE (EC 2.7.7.7) - BOVINE ADENOVIRUS TYPE 3 (MASTADENOVIRUS BOS3).
DPOL_ADECC DNA POLYMERASE (EC 2.7.7.7) - CANINE ADENOVIRUS TYPE 1 (STRAIN CLL).
DPOL_ADECT DNA POLYMERASE (EC 2.7.7.7) - CANINE ADENOVIRUS TYPE 2 (STRAIN TORONTO A 26-61).
DPOL_ADEG1 DNA POLYMERASE (EC 2.7.7.7) - AVIAN ADENOVIRUS GAL1 (STRAIN PHELPS) (FOWL ADENOVIRUS 1) (CELO).
DPOL_ARCFU DNA POLYMERASE (EC 2.7.7.7) - ARCHAEOGLOBUS FULGIDUS.
DPOL_ASFB7 DNA POLYMERASE (EC 2.7.7.7) - AFRICAN SWINE FEVER VIRUS (STRAIN BA71V) (ASFV).
DPOL_ASFL6 DNA POLYMERASE (EC 2.7.7.7) - AFRICAN SWINE FEVER VIRUS (ISOLATE LISBON 60 / LIS60) (ASFV).
DPOL_BPB03 DNA POLYMERASE (EC 2.7.7.7) (EARLY PROTEIN GP2) - BACTERIOPHAGE B103.
DPOL_BPM2 DNA POLYMERASE (EC 2.7.7.7) - BACTERIOPHAGE M2.
DPOL_BPPH2 DNA POLYMERASE (EC 2.7.7.7) (EARLY PROTEIN GP2) - BACTERIOPHAGE PHI-29.
DPOL_BPPRD DNA POLYMERASE (EC 2.7.7.7) (PROTEIN P1) - BACTERIOPHAGE PRD1.
DPOL_BPPZA DNA POLYMERASE (EC 2.7.7.7) (EARLY PROTEIN GP2) - BACTERIOPHAGE PZA.
DPOL_BPR69 DNA POLYMERASE (EC 2.7.7.7) (GP43) - BACTERIOPHAGE RB69.
DPOL_BPT4 DNA POLYMERASE (EC 2.7.7.7) (GP43) - BACTERIOPHAGE T4.
DPOL_CBEPV DNA POLYMERASE (EC 2.7.7.7) - CHORISTONEURA BIENNIS ENTOMOPOXVIRUS (CBEPV).
DPOL_CHVN2 DNA POLYMERASE (EC 2.7.7.7) - CHLORELLA VIRUS NY-2A (CV-NY2A).
DPOL_CHVP1 DNA POLYMERASE (EC 2.7.7.7) - PARAMECIUM BURSARIA CHLORELLA VIRUS 1 (PBCV-1).
DPOL_EBV DNA POLYMERASE (EC 2.7.7.7) - EPSTEIN-BARR VIRUS (STRAIN B95-8) (HUMAN HERPESVIRUS 4).
DPOL_FOWPV DNA POLYMERASE (EC 2.7.7.7) - FOWLPOX VIRUS.
DPOL_GPCMV DNA POLYMERASE (EC 2.7.7.7) - GUINEA PIG CYTOMEGALOVIRUS (STRAIN 22122 / ATCC VR682) (GPCMV).
DPOL_HCMVA DNA POLYMERASE (EC 2.7.7.7) - HUMAN CYTOMEGALOVIRUS (STRAIN AD169).
DPOL_HSV11 DNA POLYMERASE (EC 2.7.7.7) - HERPES SIMPLEX VIRUS (TYPE 1 / STRAIN 17).
DPOL_HSV1A DNA POLYMERASE (EC 2.7.7.7) - HERPES SIMPLEX VIRUS (TYPE 1 / STRAIN ANGELOTTI).
DPOL_HSV1K DNA POLYMERASE (EC 2.7.7.7) - HERPES SIMPLEX VIRUS (TYPE 1 / STRAIN KOS).
DPOL_HSV1S DNA POLYMERASE (EC 2.7.7.7) - HERPES SIMPLEX VIRUS (TYPE 1 / STRAIN SC16).
DPOL_HSV21 DNA POLYMERASE (EC 2.7.7.7) - HERPES SIMPLEX VIRUS (TYPE 2 / STRAIN 186).
DPOL_HSV6U DNA POLYMERASE (EC 2.7.7.7) - HERPES SIMPLEX VIRUS (TYPE 6 / STRAIN UGANDA-1102).
DPOL_HSV7J DNA POLYMERASE (EC 2.7.7.7) - HERPES SIMPLEX VIRUS (TYPE 7 / STRAIN JI) (HHV7).
DPOL_HSVE2 DNA POLYMERASE (EC 2.7.7.7) - EQUINE HERPESVIRUS TYPE 2 (STRAIN 86/87) (EHV-2).
DPOL_HSVEB DNA POLYMERASE (EC 2.7.7.7) - EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) (EHV-1).
DPOL_HSVI1 DNA POLYMERASE (EC 2.7.7.7) - ICTALURID HERPESVIRUS 1 (CHANNEL CATFISH VIRUS) (CCV).
DPOL_HSVSA DNA POLYMERASE (EC 2.7.7.7) - HERPESVIRUS SAIMIRI (STRAIN 11).
DPOL_MCMVS DNA POLYMERASE (EC 2.7.7.7) - MURINE CYTOMEGALOVIRUS (STRAIN SMITH).
DPOL_METJA DNA POLYMERASE (EC 2.7.7.7) - METHANOCOCCUS JANNASCHII.
DPOL_METTH DNA POLYMERASE (EC 2.7.7.7) - METHANOBACTERIUM THERMOAUTOTROPHICUM.
DPOL_METVO DNA POLYMERASE (EC 2.7.7.7) - METHANOCOCCUS VOLTAE.
DPOL_NPVAC DNA POLYMERASE (EC 2.7.7.7) - AUTOGRAPHA CALIFORNICA NUCLEAR POLYHEDROSIS VIRUS (ACMNPV).
DPOL_NPVBM DNA POLYMERASE (EC 2.7.7.7) - BOMBYX MORI NUCLEAR POLYHEDROSIS VIRUS (BMNPV).
DPOL_NPVCF DNA POLYMERASE (EC 2.7.7.7) - CHORISTONEURA FUMIFERANA NUCLEAR POLYHEDROSIS VIRUS (CFMNPV).
DPOL_NPVLD DNA POLYMERASE (EC 2.7.7.7) - LYMANTRIA DISPAR MULTICAPSID NUCLEAR POLYHEDROSIS VIRUS (LDMNPV).
DPOL_NPVOP DNA POLYMERASE (EC 2.7.7.7) - ORGYIA PSEUDOTSUGATA MULTICAPSID POLYHEDROSIS VIRUS (OPMNPV).
DPOL_ORFN2 DNA POLYMERASE (EC 2.7.7.7) - ORF VIRUS (STRAIN NZ2) (OV NZ-2).
DPOL_PYRAB DNA POLYMERASE (EC 2.7.7.7) (PAB POLYMERASE) - PYROCOCCUS ABYSSI.
DPOL_PYRFU DNA POLYMERASE (EC 2.7.7.7) (PFU POLYMERASE) - PYROCOCCUS FURIOSUS, AND PYROCOCCUS WOESEI.
DPOL_PYRHO DNA POLYMERASE (EC 2.7.7.7) - PYROCOCCUS HORIKOSHII.
DPOL_PYRSD DNA POLYMERASE (EC 2.7.7.7) (DEEP VENT DNA POLYMERASE) [CONTAINS: PI-PSP I ENDONUCLEASE] - PYROCOCCUS SP. (STRAIN GB-D).
DPOL_PYRSE DNA POLYMERASE (EC 2.7.7.7) - PYROCOCCUS SP. (STRAIN GE23).
DPOL_RCMVM DNA POLYMERASE (EC 2.7.7.7) - RAT CYTOMEGALOVIRUS (STRAIN MAASTRICHT).
DPOL_RHCM6 DNA POLYMERASE (EC 2.7.7.7) - RHESUS CYTOMEGALOVIRUS (STRAIN 68-1) (RHCMV).
DPOL_RSIV DNA POLYMERASE (EC 2.7.7.7) - RED SEA BREAM IRIDOVIRUS (RSIV).
DPOL_SULAC DNA POLYMERASE I (EC 2.7.7.7) - SULFOLOBUS ACIDOCALDARIUS.
DPOL_THES9 DNA POLYMERASE (EC 2.7.7.7) - THERMOCOCCUS SP. (STRAIN 9ON-7).
DPOL_VACCC DNA POLYMERASE (EC 2.7.7.7) - VACCINIA VIRUS (STRAIN COPENHAGEN).
DPOL_VACCV DNA POLYMERASE (EC 2.7.7.7) - VACCINIA VIRUS (STRAIN WR).
DPOL_VARV DNA POLYMERASE (EC 2.7.7.7) - VARIOLA VIRUS.
DPOL_VZVD DNA POLYMERASE (EC 2.7.7.7) - VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) (VZV).
DPOM_CLAPU PROBABLE DNA POLYMERASE (EC 2.7.7.7) - CLAVICEPS PURPUREA (ERGOT FUNGUS).
DPOM_MAIZE DNA POLYMERASE (EC 2.7.7.7) (S-1 DNA ORF 3) - ZEA MAYS (MAIZE).
DPOM_NEUCR PROBABLE DNA POLYMERASE (EC 2.7.7.7) - NEUROSPORA CRASSA.
DPOM_NEUIN PROBABLE DNA POLYMERASE (EC 2.7.7.7) - NEUROSPORA INTERMEDIA.
DPOM_PODAN PROBABLE DNA POLYMERASE (EC 2.7.7.7) - PODOSPORA ANSERINA.
DPOZ_HUMAN DNA POLYMERASE ZETA CATALYTIC SUBUNIT (EC 2.7.7.7) - HOMO SAPIENS (HUMAN).
DPOZ_YEAST DNA POLYMERASE ZETA CATALYTIC SUBUNIT (EC 2.7.7.7) - SACCHAROMYCES CEREVISIAE (BAKER'S YEAST).
O03684 PROBABLE DNA POLYMERASE (EC 2.7.7.7) - GELASINOSPORA SP.
O11414 DNA POLYMERASE - AVIAN ADENOVIRUS EDS.
O36363 DNA POLYMERASE (EC 2.7.7.7) - ALCELAPHINE HERPESVIRUS 1 (WILDEBEEST HERPESVIRUS).
O36638 DNA-DEPENDENT DNA POLYMERASE HOMOLOG (EC 2.7.7.7) - FELDMANNIA SP. VIRUS.
O39234 DNA POLYMERASE (EC 2.7.7.7) - RHESUS MONKEY RHADINOVIRUS H26-95.
O39272 COUNTERPART OF HSV-1 GENE UL30 AND VZV GENE 28 (EC 2.7.7.7) - EQUINE HERPESVIRUS 4.
O40915 ORF 09 (EC 2.7.7.7) - KAPOSI'S SARCOMA-ASSOCIATED HERPESVIRUS (KSHV) (HUMAN HERPESVIRUS 8).
O41930 DNA POLYMERASE (EC 2.7.7.7) - MURINE HERPESVIRUS 68.
O57191 DNA POLYMERASE (EC 2.7.7.7) - VACCINIA VIRUS.
O62074 C25F9.2 PROTEIN - CAENORHABDITIS ELEGANS.
O62218 F33H2.5 PROTEIN - CAENORHABDITIS ELEGANS.
O64795 T1F15.3 PROTEIN (EC 2.7.7.7) - ARABIDOPSIS THALIANA (MOUSE-EAR CRESS).
O74046 ARCHAEL FAMILY B DNA POLYMERASE (EC 2.7.7.7) - CENARCHAEUM SYMBIOSUM.
O74719 DNA POLYMERASE (EC 2.7.7.7) - DEBARYOMYCES HANSENII (YEAST) (TORULASPORA HANSENII).
O77034 DNA POLYMERASE ALPHA 180K SUBUNIT (EC 2.7.7.7) - DROSOPHILA MELANOGASTER (FRUIT FLY).
O78938 B TYPE DNA POLYMERASE - AGROCYBE AEGERITA.
O92787 DNA POLYMERASE - BOVINE ADENOVIRUS TYPE 3 (MASTADENOVIRUS BOS3).
O92827 CATALYTIC SUBUNIT OF REPLICATIVE DNA POLYMERASE (EC 2.7.7.7) - HUMAN HERPESVIRUS 7.
O93043 DNA POLYMERASE (EC 2.7.7.7) - FELINE HERPESVIRUS (FELID HERPESVIRUS 1).
P77933 DNA-DEPENDENT DNA POLYMERASE (EC 2.7.7.7) (DNA-DIRECTED DNA POLYMERASE) (DNA NUCLEOTIDYLTRANSFERASE (DNA-DIRECTED)) - PYROCOCCUS SP.
P88907 ORF 9 (EC 2.7.7.7) - KAPOSI'S SARCOMA-ASSOCIATED HERPESVIRUS (KSHV) (HUMAN HERPESVIRUS 8).
P89285 DNA POLYMERASE HOMOLOG (EC 2.7.7.7) - XESTIA C-NIGRUM GRANULOSIS VIRUS (XNGV) (XESTIA C-NIGRUM GRANULOVIRUS).
P89453 DNA POLYMERASE (EC 2.7.7.7) - HERPES SIMPLEX VIRUS (TYPE 2).
P90829 F10C2.4 PROTEIN (EC 2.7.7.7) - CAENORHABDITIS ELEGANS.
Q01140 PUTATIVE DNA-POLYMERASE, B-TYPE.
Q35599 DNA POLYMERASE - PHYSARUM POLYCEPHALUM (SLIME MOLD).
Q37989 DNA POLYMERASE - BACTERIOPHAGE CP-1.
Q38545 BACTERIOPHAGE PHI29 TEMPERATURE SENSITIVE MUTANT TS2(98) DNA POLYMERASE - BACTERIOPHAGE PHI-29.
Q59690 DNA POLYMERASE (EC 2.7.7.7) - PYRODICTIUM OCCULTUM.
Q59691 DNA POLYMERASE (EC 2.7.7.7) - PYRODICTIUM OCCULTUM.
Q69281 DNA POLYMERASE (EC 2.7.7.7) - TURKEY HERPESVIRUS.
Q82482 DNA-DIRECTED DNA POLYMERASE - HELICOVERPA ZEA NUCLEAR POLYHEDROSIS VIRUS.
Q86992 DNA POLYMERASE - SPODOPTERA ASCOVIRUS.
Q89604 UL30 (EC 2.7.7.7) - BOVINE HERPESVIRUS 1.
Q96206 DNA POLYMERASE - BACTERIOPHAGE GA.
Q98207 MC039L (EC 2.7.7.7) - MOLLUSCUM CONTAGIOSUM VIRUS SUBTYPE 1 (MCVI).

DPO2_KLULA DNA POLYMERASE (EC 2.7.7.7) (PLASMID PGKL-2 PROTEIN 2) - KLUYVEROMYCES LACTIS (YEAST).
DPOL_THEFM DNA POLYMERASE (EC 2.7.7.7) (POL TFU) - THERMOCOCCUS FUMICOLANS.
DPOL_THELI DNA POLYMERASE (EC 2.7.7.7) (VENT DNA POLYMERASE) [CONTAINS: PI-TLI I ENDONUCLEASE; PI-TLI II ENDONUCLEASE] - THERMOCOCCUS LITORALIS.
DPOL_THEST DNA POLYMERASE (EC 2.7.7.7) - THERMOCOCCUS SP. (STRAIN TY).
DPOM_ASCIM PROBABLE DNA POLYMERASE (EC 2.7.7.7) - ASCOBOLUS IMMERSUS.
O21376 DNA POLYMERASE - PICHIA KLUYVERI (YEAST).
O61796 C33E10.6 PROTEIN - CAENORHABDITIS ELEGANS.
Q09038 SIMILARITY TO DNA POLYMERASE - SACCHAROMYCES KLUYVERI (YEAST).
Q35590 ORF-221 - PHYSARUM POLYCEPHALUM (SLIME MOLD).
Q39432 DNA POLYMERASE RELLATED DPO-R - BETA VULGARIS (SUGAR BEET).
Scan History
OWL12_0    3  100  NSINGLE    
OWL17_1 1 100 NSINGLE
OWL18_0 1 110 NSINGLE
OWL19_1 1 110 NSINGLE
OWL26_0 1 300 NSINGLE
SPTR37_9f 3 400 NSINGLE
Initial Motifs
Motif 1  width=14
Element Seqn Id St Int Rpt
IMSFDLTSLYPSII DPOL_BPT4 404 404 -
IKVYDVNSMYPHAM DPOL_BPPRD 216 216 -
LIVLDFQSLYPSIM DPOX_YEAST 971 971 -
ILLLDFNSLYPSII DPOA_HUMAN 856 856 -
VVVFDFASLYPSII DPOL_HSV1K 713 713 -

Motif 2 width=13
Element Seqn Id St Int Rpt
QKALKLTANSMYG DPOA_HUMAN 946 76 -
QLALKLLANVTYG DPOX_YEAST 1082 97 -
QAAIKVVCNSVYG DPOL_HSV1K 807 80 -
QLNRKILINSLYG DPOL_BPT4 553 135 -
NIFYKLILNSSYG DPOL_BPPRD 336 106 -

Motif 3 width=9
Element Seqn Id St Int Rpt
PLYCDTDSI DPOL_BPPRD 424 75 -
VIYGDTDSI DPOA_HUMAN 998 39 -
VVYGDTDSL DPOX_YEAST 1138 43 -
IIYGDTDSI DPOL_HSV1K 882 62 -
IAAGDTDSV DPOL_BPT4 614 48 -
Final Motifs
Motif 1  width=14
Element Seqn Id St Int Rpt
VLVVDFASLYPSII O41930 577 577 -
VVVLDFASLYPSII O93043 703 703 -
VVVLDFASLYPSII DPOL_VZVD 678 678 -
VLVVDFASLYPSII O36363 598 598 -
VVVFDFASLYPSII DPOL_HSVEB 714 714 -
VVVFDFASLYPSII O39272 715 715 -
IATLDFASLYPSIM DPOD_SOYBN 561 561 -
IATLDFASLYPSIM P90829 570 570 -
VLLLDFNSLYPSII DPOA_ORYSA 626 626 -
ILVMDFNSLYPSII DPOA_SCHPO 842 842 -
ILLLDFNSLYPSII DPOA_HUMAN 856 856 -
ILLLDFNSLYPSII DPOA_MOUSE 860 860 -
VMVLDFASLYPSII Q89604 746 746 -
VMVFDFASLYPSII Q69281 693 693 -
ISTLDFASLYPSIM DPOD_PLAFK 594 594 -
ISTLDFASLYPSIM DPOD_DROME 583 583 -
IATLDFNSLYPSIM DPOD_YEAST 604 604 -
IATLDFSSLYPSIM DPOD_SCHPO 583 583 -
VLVMDFNSLYPSII DPOA_YEAST 860 860 -
IATLDFSSLYPSIM DPOD_CANAL 533 533 -
VLVVDFASLYPSII DPOL_HSVSA 570 570 -
VLVVDFASLYPSII P88907 581 581 -
VLVVDFASLYPSII O40915 581 581 -
VVVFDFASLYPSII DPOL_RHCM6 587 587 -
VVCLDFASLYPSII O36638 472 472 -
ILLLDFNSLYPSII DPOA_OXYTR 886 886 -
ILLLDFNSLYPSII DPOA_OXYNO 857 857 -
IATLDFSSLYPSIM DPOD_BOVIN 597 597 -
IATLDFSSLYPSIM DPOD_MOUSE 596 596 -
IATLDFSSLYPSIM DPOD_MESAU 594 594 -
IATLDFSSLYPSIM DPOD_HUMAN 598 598 -
VAVFDFASLYPSII DPOL_GPCMV 642 642 -
ILLLDFNSLYPSLI DPOA_TRYBB 746 746 -
VLVVDFASLYPSII O39234 584 584 -
TVVFDFQSLYPSIM O92827 568 568 -
TVVFDFQSLYPSIM DPOL_HSV7J 567 567 -
VVVFDFASLYPSII DPOL_HSV11 713 713 -
VVVFDFASLYPSII DPOL_HSV1A 713 713 -
VVVFDFASLYPSII DPOL_HSV1K 713 713 -
VVVFDFASLYPSII DPOL_HSV1S 713 713 -
VVVFDFASLYPSII DPOL_HSV21 718 718 -
VVVFDFASLYPSII P89453 718 718 -
TVVFDFQSLYPSIM DPOL_HSV6U 568 568 -
VLVVDFASLYPSII DPOL_EBV 580 580 -
ILLLDFNSLYPSLI DPOA_LEIDO 749 749 -
VAVFDFASLYPSII DPOL_HCMVA 713 713 -
IATLDFSSLYPSIM DPOD_RAT 594 594 -
VLVVDFASLYPTII DPOL_HSVE2 578 578 -
ILVFDFASLYPSII DPOL_RCMVM 646 646 -
VCVFDFASLYPSII DPOL_MCMVS 620 620 -
VVVLDFASLYPSII DPOL_SULAC 507 507 -
VLLMDLNSLYPSII O77034 876 876 -
VLLMDLNSLYPSII DPOA_DROME 876 876 -
VVVLDFSSMYPSIM Q59691 435 435 -
LIVLDFQSLYPSIM DPOZ_YEAST 971 971 -
IAALDFASLYPSII DPOL_CHVN2 481 481 -
IAALDFASLYPSII DPOL_CHVP1 481 481 -
IVVLDFASLYPSII Q59690 548 548 -
ITVLDFASLYPSII DPO1_SULSO 510 510 -
VVVLDFASLYPSII DPO1_SULOH 508 508 -
VIVLDFQSLYPSMI O64795 1359 1359 -
VIPMDFQSLYPSII DPOL_RSIV 453 453 -
VVTLDFNSLYLSIM Q82482 546 546 -
VACLDFASMYPSIM DPOL_ARCFU 407 407 -
VTVMDFASLYPSII O74046 480 480 -
VATLDFNALYPTIM DPOL_NPVLD 543 543 -
VLVLDYKSLYPSII DPO2_ECOLI 414 414 -
IVSLDFRSLYPSII DPOL_PYRSE 401 401 -
IVSLDFRSLYPSII DPOL_PYRAB 401 401 -
IVYLDFRSLYPSII DPOL_THES9 400 400 -
VMSFDLTSLYPSII DPOL_BPR69 407 407 -
VLVLDFQSLYPSIV DPOZ_HUMAN 2610 2610 -
IVYLDFRALYPSII DPOL_PYRFU 401 401 -
IVSLDFMSLYPSIL DPOL_METVO 446 446 -
VMVFDYNSLYPNVC Q98207 542 542 -
TTGLDFASLYPSLI DPOL_ASFB7 509 509 -
TTGLDFASLYPSLI DPOL_ASFL6 509 509 -
TFTLDFSQLYTSIM P89285 566 566 -
VLIFDYNSLYPNVC DPOL_ORFN2 547 547 -
AFSLDFNSLYLTIM DPOL_NPVAC 526 526 -
AFSLDFNSLYLTIM DPOL_NPVBM 526 526 -
AFSLDFNSLYLTIM DPOL_NPVCF 521 521 -
AFSLDFNSLYLTIM DPOL_NPVOP 522 522 -
VLIFDYNSLYPNVC DPOL_VACCC 545 545 -
VLIFDYNSLYPNVC O57191 545 545 -
VLIFDYNSLYPNVC DPOL_VARV 544 544 -
VLIFDYNSLYPNVC DPOL_VACCV 545 545 -
VMIFDYNSLYPNVC DPOL_FOWPV 531 531 -
TAVFDFNSEYPSNI DPOL_CBEPV 553 553 -
IMSFDLTSLYPSII DPOL_BPT4 404 404 -
IVSLDFRSLYPSII DPOL_PYRHO 401 401 -
GMVFDVNSLYPSQM DPOL_BPM2 242 242 -
IVQFDFRSLYPSII DPOL_METTH 437 437 -
LVSLDFRSLYPSII DPOL_PYRSD 401 401 -
GMVFDVNSLYPAQM DPOL_BPPH2 245 245 -
GMVFDVNSLYPAQM Q38545 245 245 -
GMVFDVNSLYPAQM DPOL_BPPZA 242 242 -
VGSLDVNNMYPTLM Q86992 553 553 -
LYYYDVNSLYPSSM DPOM_MAIZE 493 493 -
GMVFDVNSLYPSQM DPOL_BPB03 242 242 -
IFSFDFNSLYPTAM DPOM_NEUCR 624 624 -
IYVYDICGMYASAL O11414 556 556 -
GMVFDVNSMYPAMM Q96206 245 245 -
IFIYDINSLYPFSM O78938 282 282 -
ELCLDFTSMYPSMM DPOL_HSVI1 639 639 -
IYVYDICGMYASAL DPOL_ADE12 545 545 -
IYVYDICGMYASAL DPOL_ADEB2 506 506 -
VFVYDICGMYASAL DPOL_ADECT 630 630 -
VFVYDICGMYASAL DPOL_ADECC 629 629 -
NGILTHNSLYPSII P77933 760 760 -
ILCLDVKSLYPAAM O74719 649 649 -
IYHLDVASMYPNIM DPOE_SCHPO 622 622 -
LYVYDICGMYASAL DPOL_ADE02 539 539 -
LYVYDICGMYASAL DPOL_ADE40 672 672 -
LYVYDICGMYASAL DPOL_ADE07 606 606 -
LYVYDICGMYASAL DPOL_ADE05 539 539 -
LYVYDICGMYASAL DPOL_ADE04 676 676 -
VLCLDVKSLYPASM DPO1_KLULA 645 645 -
NYFYDVNSLYPYIM Q35599 203 203 -
IKVYDVNSMYPHAM DPOL_BPPRD 216 216 -
IKSYDVNSLYPFAM DPOM_NEUIN 630 630 -
IYVYDICGMYASAL DPOL_ADEB3 501 501 -
IYVYDICGMYASAL O92787 501 501 -
IDIYDINSMYPATM Q37989 243 243 -
IKSYDVNSLYPFGM O03684 647 647 -
VYVFDICGMYASAL DPOL_ADEG1 505 505 -
IYHVDVASMYPNIM DPOE_YEAST 636 636 -
NGILTHNSLYPSII DPOL_METJA 788 788 -
YYYYDVNSLYPFAS DPOM_CLAPU 667 667 -
LRYYDVNSLYPFVA DPOM_PODAN 670 670 -
IYHLDVGAMYPNII O62218 607 607 -
IYHLDVGAMYPNII DPOE_HUMAN 593 593 -
LQYYDFVSMYPYLN O62074 1071 1071 -
TKSYDCNSIYPYCM Q01140 529 529 -

Motif 2 width=13
Element Seqn Id St Int Rpt
QLAIKVTCNSVYG O41930 673 82 -
QAAIKVVCNSVYG O93043 797 80 -
QAAIKVVCNSVYG DPOL_VZVD 771 79 -
QLAIKVTCNSVYG O36363 694 82 -
QSAIKVICNSVYG DPOL_HSVEB 808 80 -
QSAIKVICNSVYG O39272 809 80 -
QLALKISANSVYG DPOD_SOYBN 653 78 -
QLALKISANSVYG P90829 658 74 -
QQALKLTANSMYG DPOA_ORYSA 702 62 -
QQALKLTANSMYG DPOA_SCHPO 926 70 -
QKALKLTANSMYG DPOA_HUMAN 946 76 -
QKALKLTANSMYG DPOA_MOUSE 950 76 -
QAAIKVVCNSVYG Q89604 840 80 -
QAAIKVVCNSVYG Q69281 787 80 -
QLALKISANSVYG DPOD_PLAFK 687 79 -
QLALKISANSVYG DPOD_DROME 679 82 -
QLALKISANSVYG DPOD_YEAST 697 79 -
QLALKVSANSVYG DPOD_SCHPO 676 79 -
QQALKLTANSMYG DPOA_YEAST 940 66 -
QLALKISANSVYG DPOD_CANAL 625 78 -
QLAIKVTCNAVYG DPOL_HSVSA 666 82 -
QLAIKVTCNAVYG P88907 677 82 -
QLAIKVTCNAVYG O40915 677 82 -
QLALKVTCNAFYG DPOL_RHCM6 680 79 -
QLAQKVTMNSLYG O36638 566 80 -
QKAIKLTANSMYG DPOA_OXYTR 990 90 -
QKAIKLTANSMYG DPOA_OXYNO 960 89 -
QLALKVSANSVYG DPOD_BOVIN 689 78 -
QLALKVSANSVYG DPOD_MOUSE 688 78 -
QLALKVSANSVYG DPOD_MESAU 686 78 -
QLALKVSANSVYG DPOD_HUMAN 690 78 -
QLALKVTCNAFYG DPOL_GPCMV 736 80 -
QLALKLTANSMYG DPOA_TRYBB 840 80 -
QLAIKVTCNAVYG O39234 680 82 -
QLALKTTCNSVYG O92827 662 80 -
QLALKTTCNSVYG DPOL_HSV7J 661 80 -
QAAIKVVCNSVYG DPOL_HSV11 807 80 -
QAAIKVVCNSVYG DPOL_HSV1A 807 80 -
QAAIKVVCNSVYG DPOL_HSV1K 807 80 -
QAAIKVVCNSVYG DPOL_HSV1S 807 80 -
QAAIKVVCNSVYG DPOL_HSV21 812 80 -
QAAIKVVCNSVYG P89453 812 80 -
QLALKTTCNSVYG DPOL_HSV6U 662 80 -
QLAIKCTCNAVYG DPOL_EBV 677 83 -
QKALKLTANSMYG DPOA_LEIDO 842 79 -
QMALKVTCNAFYG DPOL_HCMVA 807 80 -
QLALKVSPNSVYG DPOD_RAT 686 78 -
QLAIKVTCNAVYG DPOL_HSVE2 674 82 -
QLALKVTCNAFYG DPOL_RCMVM 739 79 -
QLALKVTCNAFYG DPOL_MCMVS 712 78 -
QRAMKVFINATYG DPOL_SULAC 596 75 -
QMALKLTANSMYG O77034 956 66 -
QMALKLTANSMYG DPOA_DROME 956 66 -
QKALKVLANASYG Q59691 524 75 -
QLALKLLANVTYG DPOZ_YEAST 1082 97 -
QRSYKIVMNSVYG DPOL_CHVN2 581 86 -
QRSFKVVMNSVYG DPOL_CHVP1 581 86 -
QAAMKVYINASYG Q59690 635 73 -
QRAMKVFINATYG DPO1_SULSO 599 75 -
QRAMKVFINATYG DPO1_SULOH 597 75 -
QLALKLIANVTYG O64795 1467 94 -
QLAYKISANSVYG DPOL_RSIV 599 132 -
QNAVKRIANSIYG Q82482 622 62 -
QQTLKVLTNSFYG DPOL_ARCFU 489 68 -
SQALKVVLNASYG O74046 566 72 -
QNALKRIANSIYG DPOL_NPVLD 620 63 -
SQALKIIMNAFYG DPO2_ECOLI 488 60 -
QRAIKILANSYYG DPOL_PYRSE 484 69 -
QRAIKILANSYYG DPOL_PYRAB 484 69 -
QRAIKILANSFYG DPOL_THES9 483 69 -
QINRKLLINSLYG DPOL_BPR69 556 135 -
QLGLKLIANVTFG DPOZ_HUMAN 2721 97 -
QKAIKLLANSFYG DPOL_PYRFU 484 69 -
QKSIKVLANSHYG DPOL_METVO 522 62 -
QYVYKVVANSVYG Q98207 654 98 -
QKALKIFMNTFYG DPOL_ASFB7 627 104 -
QKALKIFMNTFYG DPOL_ASFL6 627 104 -
QNAAKLNCNSQYG P89285 642 62 -
QYTYKITANSVYG DPOL_ORFN2 659 98 -
QNSVKRTANSIYG DPOL_NPVAC 602 62 -
QNSVKRTANSIYG DPOL_NPVBM 602 62 -
QNLSKRTANSIYG DPOL_NPVCF 597 62 -
QNLSKRTANSIYG DPOL_NPVOP 598 62 -
QYTYKIVANSVYG DPOL_VACCC 657 98 -
QYTYKIVANSVYG O57191 657 98 -
QYTYKIIANSVYG DPOL_VARV 656 98 -
QYTYKIVANSVYG DPOL_VACCV 657 98 -
QYIYKIIANSVYG DPOL_FOWPV 643 98 -
LYSKKITINSLYG DPOL_CBEPV 664 97 -
QLNRKILINSLYG DPOL_BPT4 553 135 -
QRAIKILANSILP DPOL_PYRHO 484 69 -
KQLAKLMLNSLYG DPOL_BPM2 376 120 -
QEALKRLANTMYG DPOL_METTH 520 69 -
QRAIKILANSILP DPOL_PYRSD 484 69 -
KQLAKLMLNSLYG DPOL_BPPH2 379 120 -
KQLAKLMLNSLYG Q38545 379 120 -
KQLAKLMLNSLYG DPOL_BPPZA 376 120 -
QLAYKVTANSIYG Q86992 757 190 -
DFIYKITMNSLYG DPOM_MAIZE 625 118 -
KQLAKLMFDSLYG DPOL_BPB03 376 120 -
KQMAKLLLNTLYG DPOM_NEUCR 747 109 -
RSISKLLSNALYG O11414 708 138 -
SLQAKLMLNSLYG Q96206 381 122 -
NYIAKILMNSLYG O78938 411 115 -
QNEMKICTNTHYG DPOL_HSVI1 745 92 -
RSIAKLLSNALYG DPOL_ADE12 697 138 -
RSIAKLLSNALYG DPOL_ADEB2 658 138 -
RSIAKLLSNALYG DPOL_ADECT 781 137 -
RSIAKLLSNALYG DPOL_ADECC 780 137 -
QRAIKILANSILP P77933 843 69 -
RNVIKIIMNSLWG O74719 784 121 -
QLAHKVILNSFYG DPOE_SCHPO 805 169 -
RSIAKLLSNALYG DPOL_ADE02 691 138 -
RSIAKLLSNALYG DPOL_ADE40 824 138 -
RSIAKLLSNALYG DPOL_ADE07 757 137 -
RSIAKLLSNALYG DPOL_ADE05 691 138 -
RSIAKLLSNALYG DPOL_ADE04 828 138 -
RNVIKIIMNSLWG DPO1_KLULA 780 121 -
KDLYKKLLNTLYG Q35599 340 123 -
NIFYKLILNSSYG DPOL_BPPRD 336 106 -
YYISKLLMNSLYG DPOM_NEUIN 766 122 -
RSIAKLLSNALYG DPOL_ADEB3 653 138 -
RSIAKLLSNALYG O92787 653 138 -
KQKAKIMLNSLYG Q37989 382 125 -
YYISKLLMNSLYG O03684 784 123 -
RSISKMLSNALYG DPOL_ADEG1 656 137 -
QLAHKVILNSFYG DPOE_YEAST 820 170 -
QKSLKILANSILP DPOL_METJA 874 72 -
KNIAKLILNSLIG DPOM_CLAPU 792 111 -
KLITKFLLNSLLG DPOM_PODAN 791 107 -
QLAHKCILNSFYG O62218 785 164 -
QLAHKCILNSFYG DPOE_HUMAN 776 169 -
RSLAKIFLNSAWG O62074 1234 149 -
EPTAKLLLNGLYG Q01140 651 108 -

Motif 3 width=9
Element Seqn Id St Int Rpt
VIYGDTDSL O41930 742 56 -
VIYGDTDSV O93043 873 63 -
VIYGDTDSV DPOL_VZVD 847 63 -
VVYGDTDSL O36363 768 61 -
VIYGDTDSV DPOL_HSVEB 883 62 -
VIYGDTDSV O39272 884 62 -
VIYGDTDSV DPOD_SOYBN 714 48 -
VIYGDTDSV P90829 722 51 -
VIYGDTDSI DPOA_ORYSA 755 40 -
VIYGDTDSV DPOA_SCHPO 978 39 -
VIYGDTDSI DPOA_HUMAN 998 39 -
VIYGDTDSI DPOA_MOUSE 1002 39 -
VVYGDTDSV Q89604 916 63 -
VIYGDTDSV Q69281 862 62 -
VIYGDTDSV DPOD_PLAFK 749 49 -
VIYGDTDSV DPOD_DROME 740 48 -
VVYGDTDSV DPOD_YEAST 758 48 -
VIYGDTDSV DPOD_SCHPO 737 48 -
VVYGDTDSV DPOA_YEAST 992 39 -
VIYGDTDSV DPOD_CANAL 686 48 -
VIYGDTDSL DPOL_HSVSA 737 58 -
VIYGDTDSL P88907 748 58 -
VIYGDTDSL O40915 748 58 -
VIYGDTDSV DPOL_RHCM6 753 60 -
VIYGDTDSV O36638 619 40 -
VVYGDTDSI DPOA_OXYTR 1043 40 -
VVYGDTDSI DPOA_OXYNO 1013 40 -
VVYGDTDSV DPOD_BOVIN 750 48 -
VVYGDTDSV DPOD_MOUSE 749 48 -
VVYGDTDSV DPOD_MESAU 747 48 -
VVYGDTDSV DPOD_HUMAN 751 48 -
VIYGDTDSV DPOL_GPCMV 809 60 -
VIYGDTDSV DPOA_TRYBB 894 41 -
VVYGDTDSL O39234 751 58 -
VIYGDTDSL O92827 736 61 -
VIYGDTDSL DPOL_HSV7J 735 61 -
IIYGDTDSI DPOL_HSV11 882 62 -
IIYGDTDSI DPOL_HSV1A 882 62 -
IIYGDTDSI DPOL_HSV1K 882 62 -
IIYGDTDSI DPOL_HSV1S 882 62 -
IIYGDTDSI DPOL_HSV21 887 62 -
IIYGDTDSI P89453 887 62 -
VIYGDTDSI DPOL_HSV6U 736 61 -
VIYGDTDSL DPOL_EBV 751 61 -
VIYGDTDSV DPOA_LEIDO 896 41 -
VIYGDTDSV DPOL_HCMVA 906 86 -
VVYGDTDSV DPOD_RAT 747 48 -
VIYGDTDSL DPOL_HSVE2 745 58 -
IVYGDTDSV DPOL_RCMVM 814 62 -
IIYGDTDSV DPOL_MCMVS 787 62 -
VIYGDTDSL DPOL_SULAC 648 39 -
VVYGDTDSL O77034 1007 38 -
VVYGDTDSL DPOA_DROME 1007 38 -
VIYGDTDSL Q59691 576 39 -
VVYGDTDSL DPOZ_YEAST 1138 43 -
VIYGDTDSV DPOL_CHVN2 635 41 -
VIYGDTDSV DPOL_CHVP1 635 41 -
VLYGDTDSL Q59690 687 39 -
VLYGDTDSL DPO1_SULSO 651 39 -
VLYGDTDSM DPO1_SULOH 649 39 -
VVYGDTDSM O64795 1523 43 -
IVYGDTDSC DPOL_RSIV 652 40 -
VIYGDTDSS Q82482 684 49 -
VLYGDTDSI DPOL_ARCFU 541 39 -
VLYGDTDSL O74046 618 39 -
VIYGDTDSC DPOL_NPVLD 682 49 -
VIYGDTDST DPO2_ECOLI 540 39 -
VLYIDTDGL DPOL_PYRSE 536 39 -
VLYIDTDGL DPOL_PYRAB 536 39 -
VLYADTDGL DPOL_THES9 536 40 -
VLYGDTDSI DPOL_BPR69 617 48 -
VVYGDTDSM DPOZ_HUMAN 2777 43 -
VLYIDTDGL DPOL_PYRFU 537 40 -
VIYADTDGF DPOL_METVO 574 39 -
SVYGDTDSI Q98207 746 79 -
IKYGDTDSL DPOL_ASFB7 679 39 -
IKYGDTDSL DPOL_ASFL6 679 39 -
VVYGDTDST P89285 704 49 -
SVYGDTDSV DPOL_ORFN2 755 83 -
VVYGDTDST DPOL_NPVAC 664 49 -
VVYGDTDST DPOL_NPVBM 664 49 -
VLYGDTDST DPOL_NPVCF 659 49 -
VLYGDTDST DPOL_NPVOP 660 49 -
SVYGDTDSV DPOL_VACCC 747 77 -
SVYGDTDSV O57191 747 77 -
SVYGDTDSV DPOL_VARV 746 77 -
SVYGDTDSV DPOL_VACCV 747 77 -
SVYGDTDSI DPOL_FOWPV 731 75 -
IIYGDTDSL DPOL_CBEPV 749 72 -
IAAGDTDSV DPOL_BPT4 614 48 -
VLYIDTDGL DPOL_PYRHO 996 499 -
IIYCDTDSI DPOL_BPM2 449 60 -
TVYADTDGF DPOL_METTH 572 39 -
VLYIDTDGL DPOL_PYRSD 1074 577 -
IIYCDTDSI DPOL_BPPH2 452 60 -
IIYCDTDSI Q38545 452 60 -
IIYCDTDSI DPOL_BPPZA 449 60 -
TIYSDTDSM Q86992 810 40 -
CYYTDTDSV DPOM_MAIZE 725 87 -
IIYCDTDSI DPOL_BPB03 449 60 -
SAYTDTDSI DPOM_NEUCR 858 98 -
VVYGDTDSL O11414 880 159 -
FIYADTDSI Q96206 454 60 -
LFYSDTDSV O78938 516 92 -
PNYGDTDST DPOL_HSVI1 794 36 -
SVYGDTDSL DPOL_ADE12 872 162 -
SVYGDTDSL DPOL_ADEB2 825 154 -
SVYGDTDSL DPOL_ADECT 958 164 -
SVYGDTDSL DPOL_ADECC 957 164 -
VIYSDTDGF P77933 1433 577 -
CIYSDTDSI O74719 874 77 -
PLELDTDGI DPOE_SCHPO 856 38 -
SVYGDTDSL DPOL_ADE02 866 162 -
SVYGDTDSL DPOL_ADE40 999 162 -
SVYGDTDSL DPOL_ADE07 932 162 -
SVYGDTDSL DPOL_ADE05 866 162 -
SVYGDTDSL DPOL_ADE04 1003 162 -
CIYSDTDSI DPO1_KLULA 870 77 -
VIYIDTDGL Q35599 421 68 -
PLYCDTDSI DPOL_BPPRD 424 75 -
IYYIDTDGI DPOM_NEUIN 860 81 -
FVYGDTDSM DPOL_ADEB3 834 168 -
FVYGDTDSM O92787 834 168 -
FLYADTDSL Q37989 455 60 -
IYYIDTDGI O03684 878 81 -
SLYGDTDSL DPOL_ADEG1 881 212 -
PLELDTDGI DPOE_YEAST 871 38 -
VLYIDTDGF DPOL_METJA 1402 515 -
LYYTDTDSI DPOM_CLAPU 913 108 -
LYYTDTDSI DPOM_PODAN 913 109 -
PLELDTDGI O62218 836 38 -
PLELDTDGI DPOE_HUMAN 827 38 -
LIYCDTDSL O62074 1306 59 -
VFMTDTDCI Q01140 764 100 -