Identifier | 6PGDHDRGNASE  [View Relations]  [View Alignment]  
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Accession | PR00076 |
No. of Motifs | 6 |
Creation Date | 15-FEB-1995  (UPDATE 07-JUN-1999) |
Title | 6-phosphogluconate dehydrogenase signature |
Database References | PROSITE; PS00461 6PGD BLOCKS; BL00461 PFAM; PF00393 6PGD INTERPRO; IPR001744 PDB; 1PGD CATH; 1PGD
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Literature References | 1. BROEDEL, S.E. AND WOLF, R.E.
Genetic tagging, cloning, and DNA sequence of the Synechococcus sp. strain
PCC7942 gene (gnd) encoding 6-phosphogluconate dehydrogenase.
J.BACTERIOL. 172 4023-4031 (1990).
2. ADAMS, M.J., ARCHIBOLD, I.G., BUGG, C.E., CARNE, A., GOVER, S.,
HELLIWELL, J.R., PICKERSGILL, R.W. AND WHITE, S.W.
The three dimensional structire of sheep liver 6-phosphogluconate
dehydrogenase at 2.6 A resolution.
EMBO J. 2 1009-1014 (1983).
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Documentation | 6-Phosphogluconate dehydrogenase (6PGD) is an oxidative carboxylase that
catalyses the conversion of 6-phosphogluconate to ribulose 5-phosphate in
the presence of NADP. This reaction is a component of the hexose mono-
phosphate shunt and pentose phosphate pathways (PPP) [1,2]. The protein is
a homodimer in which the monomers act independently [2]: each contains a
large, mainly alpha-helical domain and a smaller beta-alpha-beta domain,
containing a mixed parallel and anti-parallel 6-stranded beta sheet [2].
NADP is bound in a cleft in the small domain, the substrate binding in an
adjacent pocket [2].
6PGDHDRGNASE is a 6-element fingerprint that provides a signature for
6-phosphogluconates. The fingerprint was derived from an initial alignment
of 6 sequences: the motifs were drawn from conserved regions around the
NADP- and substrate-binding pockets, motif 5 including the region encoded
by PROSITE pattern 6PGD (PS00461), which is involved in substrate binding.
Two iterations on OWL25.1 were required to reach convergence, at which
point a true set containing 30 sequences was identified. A single partial
match was also found, STMDNAGYR: this is a 6-phosphogluconate homologue,
located in the dnaA-gyrA region of the Streptomyces coelicolor chromosome,
which lacks a large portion of the C-terminal region (including motif 6).
An update on SPTR37_9f identified a true set of 46 sequences, and 10
partial matches.
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Summary Information | 46 codes involving 6 elements 5 codes involving 5 elements 1 codes involving 4 elements 2 codes involving 3 elements 2 codes involving 2 elements
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Composite Feature Index | 6 | 46 | 46 | 46 | 46 | 46 | 46 | 5 | 4 | 4 | 5 | 5 | 5 | 2 | 4 | 0 | 1 | 1 | 1 | 1 | 0 | 3 | 1 | 1 | 2 | 2 | 0 | 0 | 2 | 2 | 0 | 2 | 0 | 0 | 0 | | 1 | 2 | 3 | 4 | 5 | 6 |
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True Positives | 6PG1_YEAST 6PG2_YEAST 6PG9_ECOLI 6PGD_ACTAC 6PGD_BACLI 6PGD_BACSU 6PGD_CANAL 6PGD_CERCA 6PGD_DROME 6PGD_DROSI 6PGD_ECOLI 6PGD_HAEIN 6PGD_HUMAN 6PGD_KLEPN 6PGD_SALTY 6PGD_SHEEP 6PGD_SHIFL 6PGD_SYNP7 6PGD_SYNY3 6PGD_TREPA 6PGD_TRYBB O22111 O32911 O60037 O66227 O81237 O81238 O84066 P95165 P96789 Q17761 Q40311 Q47571 Q47573 Q47574 Q47576 Q47577 Q47578 Q47579 Q47580 Q59410 Q59413 Q59414 Q59415 Q59416 Q60254 |
True Positive Partials | |
Sequence Titles | 6PG1_YEAST 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING 1 (EC 1.1.1.44) - SACCHAROMYCES CEREVISIAE (BAKER'S YEAST). 6PG2_YEAST 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING 2 (EC 1.1.1.44) - SACCHAROMYCES CEREVISIAE (BAKER'S YEAST). 6PG9_ECOLI 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING (EC 1.1.1.44) - ESCHERICHIA COLI. 6PGD_ACTAC 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING (EC 1.1.1.44) - ACTINOBACILLUS ACTINOMYCETEMCOMITANS (HAEMOPHILUS ACTINOMYCETEMCOMITANS). 6PGD_BACLI 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING (EC 1.1.1.44) - BACILLUS LICHENIFORMIS. 6PGD_BACSU 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING (EC 1.1.1.44) - BACILLUS SUBTILIS. 6PGD_CANAL 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING (EC 1.1.1.44) - CANDIDA ALBICANS (YEAST). 6PGD_CERCA 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING (EC 1.1.1.44) - CERATITIS CAPITATA (MEDITERRANEAN FRUIT FLY). 6PGD_DROME 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING (EC 1.1.1.44) - DROSOPHILA MELANOGASTER (FRUIT FLY). 6PGD_DROSI 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING (EC 1.1.1.44) - DROSOPHILA SIMULANS (FRUIT FLY). 6PGD_ECOLI 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING (EC 1.1.1.44) - ESCHERICHIA COLI. 6PGD_HAEIN 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING (EC 1.1.1.44) - HAEMOPHILUS INFLUENZAE. 6PGD_HUMAN 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING (EC 1.1.1.44) - HOMO SAPIENS (HUMAN). 6PGD_KLEPN 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING (EC 1.1.1.44) - KLEBSIELLA PNEUMONIAE. 6PGD_SALTY 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING (EC 1.1.1.44) - SALMONELLA TYPHIMURIUM. 6PGD_SHEEP 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING (EC 1.1.1.44) - OVIS ARIES (SHEEP). 6PGD_SHIFL 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING (EC 1.1.1.44) - SHIGELLA FLEXNERI. 6PGD_SYNP7 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING (EC 1.1.1.44) - SYNECHOCOCCUS SP. (STRAIN PCC 7942) (ANACYSTIS NIDULANS R2). 6PGD_SYNY3 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING (EC 1.1.1.44) - SYNECHOCYSTIS SP. (STRAIN PCC 6803). 6PGD_TREPA 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING (EC 1.1.1.44) - TREPONEMA PALLIDUM. 6PGD_TRYBB 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING (EC 1.1.1.44) - TRYPANOSOMA BRUCEI BRUCEI. O22111 6-PHOSPHOGLUCONATE DEHYDROGENASE (EC 1.1.1.44) - GLYCINE MAX (SOYBEAN). O32911 6-PHOSPHOGLUCONATE DEHYDROGENASE - MYCOBACTERIUM LEPRAE. O60037 6-PHOSPHOGLUCONATE DEHYDROGENASE (EC 1.1.1.44) - CUNNINGHAMELLA ELEGANS. O66227 GLUCONATE-6-PHOSPHATE DEHYDROGENASE (EC 1.1.1.44) - ESCHERICHIA COLI. O81237 PUTATIVE CYTOSOLIC 6-PHOSPHOGLUCONATE DEHYDROGENASE - ZEA MAYS (MAIZE). O81238 PUTATIVE CYTOSOLIC 6-PHOSPHOGLUCONATE DEHYDROGENASE - ZEA MAYS (MAIZE). O84066 6-PHOSPHOGLUCONATE DEHYDROGENASE (EC 1.1.1.44) - CHLAMYDIA TRACHOMATIS. P95165 COSMID Y359 - MYCOBACTERIUM TUBERCULOSIS. P96789 6-PHOSPHOGLUCONATE DEHYDROGENASE (EC 1.1.1.44) - LACTOCOCCUS LACTIS. Q17761 T25B9.9 PROTEIN (EC 1.1.1.44) - CAENORHABDITIS ELEGANS. Q40311 6-PHOSPHOGLUCONATE DEHYDROGENASE - MEDICAGO SATIVA (ALFALFA). Q47571 6-PHOSPHOGLUCONATE DEHYDROGENASE (EC 1.1.1.44) - ESCHERICHIA COLI. Q47573 6-PHOSPHOGLUCONATE DEHYDROGENASE (EC 1.1.1.44) - ESCHERICHIA COLI. Q47574 6-PHOSPHOGLUCONATE DEHYDROGENASE (EC 1.1.1.44) - ESCHERICHIA COLI. Q47576 6-PHOSPHOGLUCONATE DEHYDROGENASE (EC 1.1.1.44) - ESCHERICHIA COLI. Q47577 6-PHOSPHOGLUCONATE DEHYDROGENASE (EC 1.1.1.44) - ESCHERICHIA COLI. Q47578 6-PHOSPHOGLUCONATE DEHYDROGENASE (EC 1.1.1.44) - ESCHERICHIA COLI. Q47579 6-PHOSPHOGLUCONATE DEHYDROGENASE (EC 1.1.1.44) - ESCHERICHIA COLI. Q47580 6-PHOSPHOGLUCONATE DEHYDROGENASE (EC 1.1.1.44) - ESCHERICHIA COLI. Q59410 6-PHOSPHOGLUCONATE DEHYDROGENASE (EC 1.1.1.44) (PHOSPHOGLUCONATE DEHYDROGENASE (DECARBOXYLATING)) (PHOSPHOGLUCONIC ACID DEHYDROGENASE) (6-PHOSPHOGLUCONIC DEHYDROGENASE) (6-PHOSPHOGLUCONIC CARBOXYLASE) (6PGD) - ESCHERICHIA COLI. Q59413 6-PHOSPHOGLUCONATE DEHYDROGENASE (EC 1.1.1.44) (PHOSPHOGLUCONATE DEHYDROGENASE (DECARBOXYLATING)) (PHOSPHOGLUCONIC ACID DEHYDROGENASE) (6-PHOSPHOGLUCONIC DEHYDROGENASE) (6-PHOSPHOGLUCONIC CARBOXYLASE) (6PGD) - ESCHERICHIA COLI. Q59414 6-PHOSPHOGLUCONATE DEHYDROGENASE (EC 1.1.1.44) (PHOSPHOGLUCONATE DEHYDROGENASE (DECARBOXYLATING)) (PHOSPHOGLUCONIC ACID DEHYDROGENASE) (6-PHOSPHOGLUCONIC DEHYDROGENASE) (6-PHOSPHOGLUCONIC CARBOXYLASE) (6PGD) - ESCHERICHIA COLI. Q59415 6-PHOSPHOGLUCONATE DEHYDROGENASE (EC 1.1.1.44) (PHOSPHOGLUCONATE DEHYDROGENASE (DECARBOXYLATING)) (PHOSPHOGLUCONIC ACID DEHYDROGENASE) (6-PHOSPHOGLUCONIC DEHYDROGENASE) (6-PHOSPHOGLUCONIC CARBOXYLASE) (6PGD) - ESCHERICHIA COLI. Q59416 6-PHOSPHOGLUCONATE DEHYDROGENASE (EC 1.1.1.44) (PHOSPHOGLUCONATE DEHYDROGENASE (DECARBOXYLATING)) (PHOSPHOGLUCONIC ACID DEHYDROGENASE) (6-PHOSPHOGLUCONIC DEHYDROGENASE) (6-PHOSPHOGLUCONIC CARBOXYLASE) (6PGD) - ESCHERICHIA COLI. Q60254 6-PHOSPHOGLUCONATE DEHYDROGENASE (EC 1.1.1.44) (PHOSPHOGLUCONATE DEHYDROGENASE (DECARBOXYLATING)) (PHOSPHOGLUCONIC ACID DEHYDROGENASE) (6-PHOSPHOGLUCONIC DEHYDROGENASE) (6-PHOSPHOGLUCONIC CARBOXYLASE) (6PGD) - ESCHERICHIA COLI. O06574 GND2 - MYCOBACTERIUM TUBERCULOSIS. O51509 PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING (GND) - BORRELIA BURGDORFERI (LYME DISEASE SPIROCHETE). O88014 6-PHOSPHOGLUCONATE DEHYDROGENASE - STREPTOMYCES COELICOLOR. YQEC_BACSU HYPOTHETICAL 32.8 KD PROTEIN IN NUCB-AROD INTERGENIC REGION - BACILLUS SUBTILIS. YQJI_BACSU 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING II (EC 1.1.1.44) (GNTZII) - BACILLUS SUBTILIS. Q53917 6-PHOSPHOGLUCONATE DEHYDROGENASE - STREPTOMYCES COELICOLOR. O66788 6-PHOSPHOGLUCONATE DEHYDROGENASE - AQUIFEX AEOLICUS. Q50433 ORIGIN OF REPLICATION AND GENES RPMH, DNAA, DNAN, GND, RECF, GYRB, GYRA - MYCOBACTERIUM SMEGMATIS. Y229_SYNY3 HYPOTHETICAL 29.9 KD PROTEIN SLR0229 - SYNECHOCYSTIS SP. (STRAIN PCC 6803). YBBQ_ECOLI HYPOTHETICAL 30.8 KD PROTEIN IN GIP-FDRA INTERGENIC REGION - ESCHERICHIA COLI.
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Scan History | OWL25_1 2 100 NSINGLE SPTR37_9f 2 100 NSINGLE
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Initial Motifs | Motif 1 width=24 Element Seqn Id St Int Rpt QQIGVVGMAVMGRNLALNIESRGY 6PGD_ECOLI 4 4 - QQIGVVGMAVMGRNLALNIESRGY 6PGD_SALTY 4 4 - ADIALIGLAVMGQNLILNMNDHGF 6PGD_SHEEP 3 3 - NSIGVIGLGVMGSNIALNMANKGE 6PGD_BACSU 3 3 - MDVGVVGLGVMGANLALNIAEKGF 6PGD_TRYBB 3 3 - ADIALIGLAVMGQNLILNMNDHGF NRL_1PGD 3 3 - Motif 2 width=30 Element Seqn Id St Int Rpt TPRRILLMVKAGAGTDAAIDSLKPYLDKGD 6PGD_ECOLI 66 38 - KPRRIILLVKAGQAVDNFIEKLVPLLDIGD 6PGD_SHEEP 66 39 - KPRRIILLVKAGQAVDNFIEKLVPLLDIGD NRL_1PGD 66 39 - KPRKALILVQAGAATDSTTEQLKKVFEKGD 6PGD_TRYBB 69 42 - KPRKIFLMVTAGKPVDSVIQSLKPLLEEGD 6PGD_BACSU 65 38 - TPRRILLMVKAGAGTDAAIDSLKPYLEKGD 6PGD_SALTY 66 38 - Motif 3 width=26 Element Seqn Id St Int Rpt GILFVGSGVSGGEDGARYGPSLMPGG 6PGD_SHEEP 119 23 - GILFVGSGVSGGEDGARYGPSLMPGG NRL_1PGD 119 23 - GFNFIGTGVSGGEEGALKGPSIMPGG 6PGD_ECOLI 119 23 - GFNFIGTGVSGGEEGALKGPSIMPGG 6PGD_SALTY 119 23 - GIGYLGVGISGGEVGALTGPSIMPGG 6PGD_BACSU 118 23 - GLRFLGMGISGGEEGARKGPAFFPGG 6PGD_TRYBB 122 23 - Motif 4 width=29 Element Seqn Id St Int Rpt PCCVYIGPKGAGHFTKMVHNGIEYADMQL 6PGD_BACSU 166 22 - PCCDWVGDDGAGHFVKMVHNGIEYGDMQL NRL_1PGD 168 23 - PCVTMNGSGGAGSCVKMYHNSGEYAILQI 6PGD_TRYBB 171 23 - PCVTYIGADGAGHYVKMVHNGIEYGDMQL 6PGD_ECOLI 168 23 - PCVTYIGADGAGHYVKMVHNGIEYGDMQL 6PGD_SALTY 168 23 - PCCDWVGDDGAGHFVKMVHNGIEYGDMQL 6PGD_SHEEP 168 23 - Motif 5 width=28 Element Seqn Id St Int Rpt LVDVILDEAANKGTGKWTSQSALDLGEP 6PGD_SALTY 249 52 - LVDVILDEAANKGTGKWTSQSALDLGEP 6PGD_ECOLI 249 52 - LLPKIRDSAGQKGTGKWTAISALEYGVP 6PGD_SHEEP 249 52 - LIDVILDKTGQKGTGKWTSMQAIDNGIP 6PGD_BACSU 248 53 - LTEHVMDRIGSKGTGLWSAQEALEIGVP 6PGD_TRYBB 252 52 - LLPKIRDSAGQKGTGKWTAISALEYGVP NRL_1PGD 249 52 - Motif 6 width=23 Element Seqn Id St Int Rpt IAKIFRAGCIIRAQFLQKITDAY 6PGD_SALTY 356 79 - TIATFRAGCILQGYLLKPMTEAF 6PGD_TRYBB 365 85 - IAKIFRAGCIIRAQFLQKITDAY 6PGD_ECOLI 356 79 - IALIFRGGCIIRADFLNVISEAF 6PGD_BACSU 356 80 - IALMWRGGCIIRSVFLGKIKDAF NRL_1PGD 357 80 - IALMWRGGCIIRSVFLGKIKDAF 6PGD_SHEEP 357 80 -
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Final Motifs | Motif 1 width=24 Element Seqn Id St Int Rpt QQIGVVGMAVMGRNLALNIESRGY 6PGD_ECOLI 4 4 - QQIGVVGMAVMGRNLALNIESRGY Q59416 4 4 - QQIGVVGMAVMGRNLALNIESRGY Q59415 4 4 - QQIGVVGMAVMGRNLALNIESRGY Q59414 4 4 - QQIGVVGMAVMGRNLALNIESRGY Q59413 4 4 - QQIGVVGMAVMGRNLALNIESRGY Q47580 4 4 - QQIGVVGMAVMGRNLALNIESRGY Q47574 4 4 - QQIGVVGMAVMGRNLALNIESRGY 6PGD_SHIFL 4 4 - QQIGVVGMAVMGRNLALNIESRGY Q47579 4 4 - QQIGVVGMAVMGRNLALNIESRGY Q47578 4 4 - QQIGVVGMAVMGRNLALNIESRGY Q47576 4 4 - QQIGVVGMAVMGRNLALNIESRGY 6PGD_SALTY 4 4 - QQIGVVGMAVMGRNLALNIESRGY Q47571 4 4 - QQIGVVGMAVMGRNLALNIESRGY Q60254 4 4 - QQIGVVGMAVMGRNLALNIESRGY Q47577 4 4 - QQIGVVGMAVMGRNLALNIESRGY Q59410 4 4 - QQIGVVGMAVMGRNLALNIESRGY O66227 4 4 - QQIGVVGMAVMGRNLALNIESRGY 6PGD_KLEPN 4 4 - QQIGVVGMAVMGRNLALNIESRGY Q47573 4 4 - QQIGVVGMAVMGRNLALNIESRGY 6PG9_ECOLI 4 4 - ANFGVVGMAVMGKNLALNVESRGY P96789 4 4 - GDIGLIGLAVMGQNLILNMADHGY 6PGD_CANAL 29 29 - ADFGLIGLAVMGQNLILNAADHGF 6PG1_YEAST 3 3 - ADIGLIGLAVMGQNLILNMNDHGF O60037 6 6 - GDIGVIGLAVMGQNLILNMNDHGF 6PGD_ACTAC 5 5 - RTFGVIGLAVMGENLALNVESRGF 6PGD_SYNY3 11 11 - ADIALIGLAVMGQNLILNMNDHGF 6PGD_SHEEP 3 3 - QQFGLIGLAVMGENLALNIERNGF 6PGD_SYNP7 4 4 - ADIALIGLAVMGQNLILNMNDHGF 6PGD_HUMAN 3 3 - GDIGVIGLAVMGQNLILNMNDHGF 6PGD_HAEIN 5 5 - GDLGLVGLAVMGQNLILNAADHGF 6PG2_YEAST 6 6 - ADIALIGLAVMGQNLILNMDEKGF 6PGD_DROME 5 5 - ADIALIGLAVMGQNLVLNMNDKGF 6PGD_CERCA 5 5 - ADIGFIGLAVMGENLVLNIERNGF 6PGD_TREPA 3 3 - ADIALIGLAVMGQNLILNMDEKGF 6PGD_DROSI 5 5 - NTIGVIGLGVMGSNIALNMASKGE 6PGD_BACLI 3 3 - AQIGVTGLAVMGSNIARNFARHGY O32911 14 14 - TRIGLAGLAVMGQNLALNIAEKGF O81237 4 4 - TRIGLAGLAVMGQNLALNIADKGF Q40311 6 6 - TGIGLAGLAVMGQNLALNIAEKGF O22111 6 6 - NSIGVIGLGVMGSNIALNMANKGE 6PGD_BACSU 3 3 - ADIAVIGLAVMGQNLILNMNDHGF Q17761 4 4 - TRIGLAGLAVMGQNLALNIAEKGF O81238 4 4 - AQIGVTGLAVMGSNIARNFARHGY P95165 11 11 - TDIGLIGLAVMGKNLVLNMVDHGF O84066 5 5 - MDVGVVGLGVMGANLALNIAEKGF 6PGD_TRYBB 3 3 - Motif 2 width=30 Element Seqn Id St Int Rpt TPRRILLMVKAGAGTDAAIDSLKPYLDKGD 6PGD_ECOLI 66 38 - TPRRILLMVKAGAGTDAAIDSLKPYLDKGD Q59416 66 38 - TPRRILLMVKAGAGTDAAIDSLKPYLDKGD Q59415 66 38 - TPRRILLMVKAGAGTDAAIDSLKPYLDKGD Q59414 66 38 - TPRRILLMVKAGAGTDAAIDSLKPYLDKGD Q59413 66 38 - TPRRILLMVKAGAGTDAAIDSLKPYLDKGD Q47580 66 38 - TPRRILLMVKAGAGTDAAIDSLKPYLDKGD Q47574 66 38 - TPRRILLMVKAGAGTDAAIDSLKPYLDKGD 6PGD_SHIFL 66 38 - TPRRILLMVKAGAGTDAAIDSLKPYLDKGD Q47579 66 38 - TPRRILLMVKAGAGTDAAIDSLKPYLDKGD Q47578 66 38 - TPRRILLMVKAGAGTDAAIDSLKPYLDKGD Q47576 66 38 - TPRRILLMVKAGAGTDAAIDSLKPYLEKGD 6PGD_SALTY 66 38 - TPRRILLMVKAGAGTDAAIDSLKPYLDKGD Q47571 66 38 - TPRRILLMVKAGAGTDAAIDSLKPYLDKGD Q60254 66 38 - TPRRILLMVKAGAGTDAAIDSLKPYLDKGD Q47577 66 38 - TPRRILLMVKAGAGTDSAIDSLKPYLDKGD Q59410 66 38 - TPRRILLMVKAGAGTDSAIDSLKPYLDKGD O66227 66 38 - TPRRILLMVKAGAGTDSAIDSLKPYLDKGD 6PGD_KLEPN 66 38 - TPRRILLMVKAGAGTDAAIDSLKPYLDKGD Q47573 66 38 - TPRRILLMVKAGSGTDSAIDSLKPYLDKGD 6PG9_ECOLI 66 38 - KPRRIMLMVQAGAATDATIKSLLPLLDIGD P96789 66 38 - RPRRIMLLVKAGAPVDEFINQLLPYLEEGD 6PGD_CANAL 92 39 - RPRKVMLLVKAGAPVDALINQIVPLLEKGD 6PG1_YEAST 66 39 - RPRKVMLLVKAGSAVDAFIDQLLPHLEEGD O60037 69 39 - KPRKVMLMVRAGEVVDHFIDALLPHLEAGD 6PGD_ACTAC 68 39 - RPRKILVMVKAGGPVDAVINELKPLLEEGD 6PGD_SYNY3 74 39 - KPRRIILLVKAGQAVDNFIEKLVPLLDIGD 6PGD_SHEEP 66 39 - RPRRILVMVKAGGPVDAVVEQLKPLLDPGD 6PGD_SYNP7 67 39 - KPRRIILLVKAGQAVDDFIEKLVPLLDTGD 6PGD_HUMAN 66 39 - KPRKVMLMVRAGDVVDQFIEALLPHLEEGD 6PGD_HAEIN 68 39 - KPRKIMLLIKAGAPVDTLIKELVPHLDKGD 6PG2_YEAST 69 39 - SPRKVMLLVKAGSAVDDFIQQLVPLLSAGD 6PGD_DROME 68 39 - LPRKIMLLVKAGSAVDDFIQQLVPLLSPGD 6PGD_CERCA 68 39 - RPRKIMLMVKAGSAVDAVIDQILPLLEKGD 6PGD_TREPA 66 39 - SPRKVMLLVKGGSAVDDFIQQLVPLLSAGD 6PGD_DROSI 68 39 - KPRKIFLMVTAGKPVDSVIDSLVPLLEEGD 6PGD_BACLI 65 38 - TPRRVLIMVKAGDATDAVINELADVMEPSD O32911 77 39 - KPRVVIMLVKAGAPVDQTIATLAAHLDQGD O81237 69 41 - KPRVIIMLVKAGAPVEQTTKTLSAYLEKGD Q40311 71 41 - KPRVIIMLVKAGAPVDQTIKTLSAYMEKGD O22111 71 41 - KPRKIFLMVTAGKPVDSVIQSLKPLLEEGD 6PGD_BACSU 65 38 - RPRRVMMLIKAGTPVDMMIDAIVPHLEEGD Q17761 67 39 - KPRVVIMLVKAGAPVDQTIATLAAHLEQGD O81238 69 41 - KPRRVLIMVKAGEATDADAVINELADAMEP P95165 74 39 - RPRKIMIMIKAGAPVDEMIASLLPFLEEGD O84066 68 39 - KPRKALILVQAGAATDSTTEQLKKVFEKGD 6PGD_TRYBB 69 42 - Motif 3 width=26 Element Seqn Id St Int Rpt GFNFIGTGVSGGEEGALKGPSIMPGG 6PGD_ECOLI 119 23 - GFNFIGTGVSGGEEGALKGPSIMPGG Q59416 119 23 - GFNFIGTGVSGGEEGALKGPSIMPGG Q59415 119 23 - GFNFIGTGVSGGEEGALKGPSIMPGG Q59414 119 23 - GFNFIGTGVSGGEEGALKGPSIMPGG Q59413 119 23 - GFNFIGTGVSGGEEGALKGPSIMPGG Q47580 119 23 - GFNFIGTGVSGGEEGALKGPSIMPGG Q47574 119 23 - GFNFIGTGVSGGEEGALKGPSIMPGG 6PGD_SHIFL 119 23 - GFNFIGTGVSGGEEGALKGPSIMPGG Q47579 119 23 - GFNFIGTGVSGGEEGALKGPSIMPGG Q47578 119 23 - GFNFIGTGVSGGEEGALKGPSIMPGG Q47576 119 23 - GFNFIGTGVSGGEEGALKGPSIMPGG 6PGD_SALTY 119 23 - GFNFIGTGVSGGEEGALKGPSIMPGG Q47571 119 23 - GFNFIGTGVSGGEEGALKGPSIMPGG Q60254 119 23 - GFNFIGTGVSGGEEGALKGPSIMPGG Q47577 119 23 - GFNFIGTGVSGGEEGALKGPSIMPGG Q59410 119 23 - GFNFIGTGVSGGEEGALKGPSIMPGG O66227 119 23 - GFNFIGTGVSGGEEGALKGPSIMPGG 6PGD_KLEPN 119 23 - GFNFIGTGVSGGEEGALKGPSIMPGG Q47573 119 23 - GFNFIGTGVSGGEEGALKGPSIMPGG 6PG9_ECOLI 119 23 - GINFIGTGVSGGEKGALLGPSMMPGG P96789 119 23 - GILFVGSGVSGGEEGARTGPSLMPGG 6PGD_CANAL 145 23 - GILFVGSGVSGGEEGARYGPSLMPGG 6PG1_YEAST 119 23 - GILFVGSGVSGGEEGARYGPSLMPGG O60037 122 23 - GIRFIGTGVSGGEEGARHGPSIMPGG 6PGD_ACTAC 121 23 - GLGFVGMGVSGGEEGALLGPSLMPGG 6PGD_SYNY3 127 23 - GILFVGSGVSGGEDGARYGPSLMPGG 6PGD_SHEEP 119 23 - GLGFMGMGVSGGEEGALNGPSLMPGG 6PGD_SYNP7 120 23 - GILFVGSGVSGGEEGPRYGPSLMPGG 6PGD_HUMAN 119 23 - GIRFIGSGVSGGEEGARHGPSIMPGG 6PGD_HAEIN 121 23 - GILFVGSGVSGGEDGARFGPSLMPGG 6PG2_YEAST 122 23 - GLLFVGSGVSGGEEGARHGPSLMPGG 6PGD_DROME 121 23 - KILYVGSGVSGGEEGARHGPSLMPGG 6PGD_CERCA 121 23 - GIHFIGTGVSGGEEGALRGPSLMPGG 6PGD_TREPA 119 23 - GLLYVGSGVSGGEEGARHGPSLMPGG 6PGD_DROSI 121 23 - GIGYLGIGISGGEVGALKGPSIMPGG 6PGD_BACLI 118 23 - GLHFVGAGISGGEEGALNGPSIMPGG O32911 130 23 - GLLYLGMGVSGGEEGARNGPSLMPGG O81237 122 23 - GILYLGMGVSGGEEGARRGPSMMPGG Q40311 124 23 - GLLYLGLGVSGGEEGARNGPSLMPGG O22111 124 23 - GIGYLGVGISGGEVGALTGPSIMPGG 6PGD_BACSU 118 23 - GIMFVGCGVSGGEEGARFGPSLMPGG Q17761 120 23 - GLLYLGMVVSGGEEGARNGPSLMPGG O81238 122 23 - GLHFVGAGISGGEEGALNGPSIMPGG P95165 129 25 - GILFVGMGVSGGEEGARKGPSIMPGG O84066 121 23 - GLRFLGMGISGGEEGARKGPAFFPGG 6PGD_TRYBB 122 23 - Motif 4 width=29 Element Seqn Id St Int Rpt PCVTYIGADGAGHYVKMVHNGIEYGDMQL 6PGD_ECOLI 168 23 - PCVTYIGADGAGHYVKMVHNGIEYGDMQL Q59416 168 23 - PCVTYIGADGAGHYVKMVHNGIEYGDMQL Q59415 168 23 - PCVTYIGADGAGHYVKMVHNGIEYGDMQL Q59414 168 23 - PCVTYIGADGAGHYVKMVHNGIEYGDMQL Q59413 168 23 - PCVTYIGADGAGHYVKMVHNGIEYGDMQL Q47580 168 23 - PCVTYIGADGAGHYVKMVHNGIEYGDMQL Q47574 168 23 - PCVTYIGADGAGHYVKMVHNGIEYGDMQL 6PGD_SHIFL 168 23 - PCVTYIGADGAGHYVKMVHNGIEYGDMQL Q47579 168 23 - PCVTYIGADGAGHYVKMVHNGIEYGDMQL Q47578 168 23 - PCVTYIGADGAGHYVKMVHNGIEYGDMQL Q47576 168 23 - PCVTYIGADGAGHYVKMVHNGIEYGDMQL 6PGD_SALTY 168 23 - PCFTYIGADGAGHYVKMVHNGIEYGDMQL Q47571 168 23 - PCVTYIGADGAGHYVKMVHNGIEYGDMQL Q60254 168 23 - PCVTYIGADGAGHYVKMVHNGIEYGDMQL Q47577 168 23 - PCVTYIGADGAGHYVKMVHNGIEYGDMQL Q59410 168 23 - PCVTYIGADGAGHYVKMVHNGIEYGDMQL O66227 168 23 - PCVTYIGADGAGHYVKMVHNGIEYGDMQL 6PGD_KLEPN 168 23 - PCVTYIGADGAGHYVKMVHNGIEYGDMQL Q47573 168 23 - PCVTYIGADGAGHYVKMVHNGIEYGDMQL 6PG9_ECOLI 168 23 - PCVAYMGANGAGHYVKMVHNGIEYGDMQL P96789 169 24 - PCCDWVGDAGAGHYVKMVHNGIEYGDMQL 6PGD_CANAL 193 22 - PCCEWVGPAGAGHYVKMVHNGIEYGDMQL 6PG1_YEAST 167 22 - SCCEWVGETGAGHYVKMVHNGIEYGDMQL O60037 171 23 - PCCDWVGKDGAGHFVKMVHNGIEYGDMQL 6PGD_ACTAC 170 23 - ACVTFIGPGGAGHYVKMVHNGIEYGDMQL 6PGD_SYNY3 178 25 - PCCDWVGDDGAGHFVKMVHNGIEYGDMQL 6PGD_SHEEP 168 23 - PCVTYIGPGGSGHYVKMVHNGIEYGDMQL 6PGD_SYNP7 168 22 - PCCDWVGDEGAGHFVKMVHNGIEYGDMQL 6PGD_HUMAN 168 23 - PCCDWVGGEGAGHFVKMVHNGIEYGDMQL 6PGD_HAEIN 170 23 - PCCEWVGPAGSGHYVKMVHNGIEYGDMQL 6PG2_YEAST 170 22 - PCCEWVGDGGAGHFVKMVHNGIEYGDMQL 6PGD_DROME 169 22 - PCCEWVGEGGAGHFVKMVHNGIEYGDMQL 6PGD_CERCA 169 22 - PCCDWVGSDGAGHYVKMIHNGIEYGDMQI 6PGD_TREPA 168 23 - PCCEWVGDGGAGHFVKMVHNGIEYGDMQL 6PGD_DROSI 169 22 - PCCVYIGPKGAGHFVKMVHNGIEYADMQL 6PGD_BACLI 166 22 - SCCTHIGPGGSGHFVKMVHNGIEYSDMQL O32911 178 22 - PCVTYIGKGGSGNFVKMVHNGIEYGDMQL O81237 171 23 - PCVTYIGNGGSGNFVKMIHNGIEYGDMQL Q40311 173 23 - PCVTYIGKGGSGNFVKMIHNGIEYGDMQL O22111 173 23 - PCCVYIGPKGAGHFTKMVHNGIEYADMQL 6PGD_BACSU 166 22 - PCCDWVGNAGSGHFVKMVHNGIEYGDMQL Q17761 168 22 - PCVTYIGKGGSGNFVKMVHNGIEYGDMQL O81238 171 23 - PCCTHIGPDGSGHFVKMVHNGIEYSDMQL P95165 177 22 - PCCSWIGTGGAGHFVKAVHNGIEYGDIQL O84066 169 22 - PCVTMNGSGGAGSCVKMYHNSGEYAILQI 6PGD_TRYBB 171 23 - Motif 5 width=28 Element Seqn Id St Int Rpt LVDVILDEAANKGTGKWTSQSALDLGEP 6PGD_ECOLI 249 52 - LVDVILDEAANKGTGKWTSQSALDLGEP Q59416 249 52 - LVDVILDEAANKGTGKWTSQSALDLGEP Q59415 249 52 - LVDVILDEAANKGTGKWTSQSALDLGEP Q59414 249 52 - LVDVILDEAANKGTGKWTSQSALDLGEP Q59413 249 52 - LVDVILDEAANKGTGKWTSQSALDLGEP Q47580 249 52 - LVDVILDEAANKGTGKWTSQSALDLGEP Q47574 249 52 - LVDVILDEAANKGTGKWTSQSALDLGEP 6PGD_SHIFL 249 52 - LVDVILDEAANKGTGKWTSQSALDLGEP Q47579 249 52 - LVDVILDEAANKGTGKWTSQSALDLGEP Q47578 249 52 - LVDVILDEAANKGTGKWTSQSALDLGEP Q47576 249 52 - LVDVILDEAANKGTGKWTSQSALDLGEP 6PGD_SALTY 249 52 - LVDVILDEAANKGTGKWTSQSALDLGEP Q47571 249 52 - LVDVILDEAANKGTGKWTSQSSLDLGEP Q60254 249 52 - LVDVILDEAANKGTGKWTSQSVLDLGEP Q47577 249 52 - LVDVILDEAANKGTGKWTSQSSLDLGEP Q59410 249 52 - LVDVILDEAANKGTGKWTSQSSLDLGEP O66227 249 52 - LVDVILDEAANKGTGKWTSQSSLDLGEP 6PGD_KLEPN 249 52 - LVDVILDEAANKGTGKWTSQSALDLGEP Q47573 249 52 - LVDVILDEAANKGTGKWTSQSSLDLGEP 6PG9_ECOLI 249 52 - IVDKILDKAGNKGTGKWTSESALDLGVP P96789 251 53 - LVEKILDTAGQKGTGKWTAVNALDLGIP 6PGD_CANAL 275 53 - LVEKIMDTAGQKGTGKWTAINALDLGMP 6PG1_YEAST 248 52 - LVTKIRDTAGQKGTGKWTAIDSLDRGIP O60037 252 52 - LVDKVLDTAGQKGTGKWTGINALDFGIP 6PGD_ACTAC 251 52 - LIDYILDAAGQKGTGRWTVMSGLELGVP 6PGD_SYNY3 261 54 - LLPKIRDSAGQKGTGKWTAISALEYGVP 6PGD_SHEEP 249 52 - LVELILDAAGQKGTGRWTVETALEIGVA 6PGD_SYNP7 252 55 - LLPKIRDSAGQKGTGKWTAISALEYGVP 6PGD_HUMAN 249 52 - LVEKILDTAGQKGTGKWTGINALDFGIP 6PGD_HAEIN 251 52 - LVEKIMDTAGQKGTGKWTAINALDLGMP 6PG2_YEAST 251 52 - LLERIRDTAGQKGTGKWTAIAALQYGVP 6PGD_DROME 248 50 - LLERIRDTAGQKGTGKWTAISALQYGVP 6PGD_CERCA 248 50 - LLEKILDAAGQKGTGRWTCVAALEEGSP 6PGD_TREPA 249 52 - LLERIRDTAGQKGTGKWTAIAALQYGVP 6PGD_DROSI 248 50 - LIDVILDKTGQKGTGKWTSLQAIDNGIP 6PGD_BACLI 248 53 - LVDVILDKAEQKGTGRWTVQSALDLGVP O32911 260 53 - LVDKVLDKTGMKGTGKWTVQQAAELSVA O81237 253 53 - LVDKVLDKTGMKGTGKWTVQQAAELSVP Q40311 255 53 - LVDKVLDKTGMKGTGKWTVQQAAELSIA O22111 255 53 - LIDVILDKTGQKGTGKWTSMQAIDNGIP 6PGD_BACSU 248 53 - IVPKIRDSAGQKGTGKWTCFAALEYGLP Q17761 249 52 - LVDKVLDKTGMKGTGKWTVQQAAELSVA O81238 253 53 - LVDVIVDRAEQKGTGRWTVKSALDLGVP P95165 259 53 - IASTILDVAGQKGTGRWVAEDAIKAGVP O84066 250 52 - LTEHVMDRIGSKGTGLWSAQEALEIGVP 6PGD_TRYBB 252 52 - Motif 6 width=23 Element Seqn Id St Int Rpt IAKIFRAGCIIRAQFLQKITDAY 6PGD_ECOLI 356 79 - IAKIFRAGCIIRAQFLQKITDAY Q59416 356 79 - IAKIFRAGCIIRAQFLQKITDAY Q59415 356 79 - IAKIFRAGCIIRAQFLQKITDAY Q59414 356 79 - IAKIFRAGCIIRAQFLQKITDAY Q59413 356 79 - IAKIFRAGCIIRAQFLQKITDAY Q47580 356 79 - IAKIFRAGCIIRAQFLQKITDAY Q47574 356 79 - IAKIFRAGCIIRAQFLQKITDAY 6PGD_SHIFL 356 79 - IAKIFRAGCIIRARFLQKITDAY Q47579 356 79 - IAKIFRAGCIIRARFLQKITDAY Q47578 356 79 - IAKIFRAGCIIRARFLQKITDAY Q47576 356 79 - IAKIFRAGCIIRAQFLQKITDAY 6PGD_SALTY 356 79 - IAKIFRAGCIIRARFLQKITDAY Q47571 356 79 - IAKIFRAGCIIRAQFLQKITDAY Q60254 356 79 - IAKIFRAGCIIRARFLQKITDAY Q47577 356 79 - IAKIFRAGCIIRAQFLQKITDAY Q59410 356 79 - IAKIFRAGCIIRAQFLQKITDAY O66227 356 79 - IAKIFRAGCIIRAQFLQKITDAY 6PGD_KLEPN 356 79 - IAKIFRAGCIIRARFLQKTTDAY Q47573 356 79 - IAKIFRAGCIIRAQFLQKITDAY 6PG9_ECOLI 356 79 - IAQIWRAGCIIRAEFLQNITDAF P96789 358 79 - IALMWRGGCIIRSVFLAEITAAY 6PGD_CANAL 385 82 - IALMWRGGCIIRSVFLGQITKAY 6PG1_YEAST 357 81 - IALMWRGGCIIRSVFLGKIRDAY O60037 360 80 - TALLWREGCIIRSRFLGNIRDAY 6PGD_ACTAC 358 79 - IARIWKGGCIIRAGFLDKIKKAF 6PGD_SYNY3 368 79 - IALMWRGGCIIRSVFLGKIKDAF 6PGD_SHEEP 357 80 - LARIWKGGCIIRAGFLNKIKQAY 6PGD_SYNP7 360 80 - IALMWRGGCIIRSVFLGKIKDAF 6PGD_HUMAN 357 80 - TALLWREGCIIRSRFLGNIRDAY 6PGD_HAEIN 358 79 - IALMWRGGCIIRSVFLAEITKAY 6PG2_YEAST 360 81 - IALMWRGGCIIRSVFLGNIKDAY 6PGD_DROME 356 80 - IALMWRGGCIIRSVFLGNIKDAY 6PGD_CERCA 356 80 - IASLWRGGCIIRSGFLSKISAAF 6PGD_TREPA 362 85 - IALMWRGGCIIRSVFLGNIKDAY 6PGD_DROSI 356 80 - IALIFRGGCIIRAQFLNLISEVY 6PGD_BACLI 356 80 - LATIWRGGCIIRAKFLNRIKEAF O32911 367 79 - LARIWKGGCIIRAIFLDRIKKAY O81237 361 80 - LARIWKGGCIIRAIFLDRIKQAY Q40311 367 84 - LARIWKGGCIIRAIFLDRIKQAY O22111 367 84 - IALIFRGGCIIRADFLNVISEAF 6PGD_BACSU 356 80 - IALMWRGGCIIRSRFLGDIEHAF Q17761 359 82 - LARIWKGGCIIRAIFLDRIKKAY O81238 362 81 - LATIWRGGCIIRAKFLNHIKEAF P95165 366 79 - LALIWRGGCIIQSAFLDKIHQGF O84066 359 81 - TIATFRAGCILQGYLLKPMTEAF 6PGD_TRYBB 365 85 -
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