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PR00382

Identifier
LIPIDTRNSFER  [View Relations]  [View Alignment]  
Accession
PR00382
No. of Motifs
5
Creation Date
24-MAY-1995  (UPDATE 10-JUN-1999)
Title
Plant phospholipid transfer protein signature
Database References

PROSITE; PS00597 PLANT_LTP
BLOCKS; BL00597
PFAM; PF00279 LTP
INTERPRO; IPR000528
Literature References
1. SHIN, D.H., HWANG, K.Y., KIM, K.K., LIM, S., SWEET, R.S. AND SUH, S.W.
Crystallisation and preliminary X-ray crystallographic analysis of 
phospholipid transfer protein from maize seedlings.
PROTEINS 19 80-83 (1994).

Documentation
Phospholipid transfer proteins (PLTPs) transfer phospholipids, glycolipids,
fatty acids and sterols from liposomes or microsomes to mitochondria [1].
PLTPs exist in animal and plant tissues, including rat liver cytosol, 
potato tuber, castor bean, maize seedlings, spinach, barley and wheat.
While there is no sequence similarity between animal and plant PTLPs,
similarity between the plant proteins is high. The sequences contain 8
cysteines, which form 4 disulphide bridges. Plant PTLPs are also similar
to alpha-amylase inhibitor I2 from the seeds of ragi, Indian finger millet
and amylase/protease inhibitors from rice and barley.
 
LIPIDTRNSFER is a 5-element fingerprint that provides a signature for
plant phospholipid transfer proteins. The fingerprint was derived from
an initial alignment of 7 sequences: the motifs were drawn from short
conserved regions along the full alignment length, motifs 4 and 5
spanning the region encoded by PROSITE pattern PLANT_LTP (PS00597),
which contains 2 C-terminal Cys residues involved in disulphide bond
formation. Two iterations on OWL26.0 were required to reach convergence,
at which point a true set comprising 32 sequences was identified. Several
partial matches were also found, most of which are N-terminal fragments,
or sequences failing to make significant matches with motif 4.
 
An update on SPTR37_9f identified a true set of 65 sequences, and 11
partial matches.
Summary Information
  65 codes involving  5 elements
2 codes involving 4 elements
2 codes involving 3 elements
4 codes involving 2 elements
Composite Feature Index
56565656565
422220
322110
223201
12345
True Positives
NL12_PARJU    NL13_PARJU    NL21_PARJU    NL22_PARJU    
NLT1_ARATH NLT1_BRANA NLT1_GOSHI NLT1_HORVU
NLT1_LYCES NLT1_ORYSA NLT1_PRUDU NLT1_PRUPE
NLT1_SORVU NLT1_TOBAC NLT2_BRANA NLT2_GOSHI
NLT2_LYCES NLT2_ORYSA NLT2_SORVU NLT2_TOBAC
NLT3_BRANA NLT3_ORYSA NLT3_PRUDU NLT4_HORVU
NLT5_ORYSA NLT6_GOSHI NLTA_BRAOL NLTA_RICCO
NLTB_BRAOL NLTB_RICCO NLTC_RICCO NLTD_BRAOL
NLTD_RICCO NLTP_AMACA NLTP_BETVU NLTP_CICAR
NLTP_DAUCA NLTP_ELECO NLTP_GERHY NLTP_MAIZE
NLTP_PINTA NLTP_SPIOL O22482 O22483
O22485 O24037 O24038 O24440
O24485 O24583 O49200 O82582
Q39332 Q39382 Q39404 Q39950
Q40453 Q40454 Q42848 Q42849
Q43762 Q43766 Q43767 Q43871
Q43875
True Positive Partials
Codes involving 4 elements
O22484 O24309
Codes involving 3 elements
O04004 O22272
Codes involving 2 elements
AMP1_ALLCE BLT4_HORVU O49116 Q43018
Sequence Titles
NL12_PARJU  PROBABLE NONSPECIFIC LIPID-TRANSFER PROTEIN 1 PRECURSOR (LTP) (MAJOR POLLEN ALLERGEN PAR J 1.0102) (PAR J I) (P9 PROTEIN) - PARIETARIA JUDAICA. 
NL13_PARJU PROBABLE NONSPECIFIC LIPID-TRANSFER PROTEIN 1 PRECURSOR (LTP) (MAJOR POLLEN ALLERGEN PAR J 1.0201) (PAR J I) (P1 PROTEIN) - PARIETARIA JUDAICA.
NL21_PARJU PROBABLE NONSPECIFIC LIPID-TRANSFER PROTEIN 2 PRECURSOR (LTP 2) (MAJOR POLLEN ALLERGEN PAR J 2.0101) (PAR J II) (P2 PROTEIN) - PARIETARIA JUDAICA.
NL22_PARJU PROBABLE NONSPECIFIC LIPID-TRANSFER PROTEIN 2 PRECURSOR (LTP 2) (MAJOR POLLEN ALLERGEN PAR J 2.0102) (PAR J II) (P8 PROTEIN) - PARIETARIA JUDAICA.
NLT1_ARATH NONSPECIFIC LIPID-TRANSFER PROTEIN 1 PRECURSOR (LTP 1) - ARABIDOPSIS THALIANA (MOUSE-EAR CRESS).
NLT1_BRANA NONSPECIFIC LIPID-TRANSFER PROTEIN 1 PRECURSOR (LTP 1) - BRASSICA NAPUS (RAPE).
NLT1_GOSHI NONSPECIFIC LIPID-TRANSFER PROTEIN PRECURSOR (LTP) - GOSSYPIUM HIRSUTUM (UPLAND COTTON).
NLT1_HORVU NONSPECIFIC LIPID-TRANSFER PROTEIN 1 PRECURSOR (LTP 1) (PAPI) - HORDEUM VULGARE (BARLEY).
NLT1_LYCES NONSPECIFIC LIPID-TRANSFER PROTEIN 1 PRECURSOR (LTP 1) - LYCOPERSICON ESCULENTUM (TOMATO).
NLT1_ORYSA NONSPECIFIC LIPID-TRANSFER PROTEIN 1 PRECURSOR (LTP 1) (PAPI) - ORYZA SATIVA (RICE).
NLT1_PRUDU NONSPECIFIC LIPID-TRANSFER PROTEIN 1 PRECURSOR (LTP 1) - PRUNUS DULCIS (ALMOND) (PRUNUS AMYGDALUS).
NLT1_PRUPE NONSPECIFIC LIPID-TRANSFER PROTEIN 1 (LTP 1) (MAJOR ALLERGEN) - PRUNUS PERSICA (PEACH).
NLT1_SORVU NONSPECIFIC LIPID-TRANSFER PROTEIN 1 PRECURSOR (LTP 1) - SORGHUM VULGARE (SORGHUM).
NLT1_TOBAC NONSPECIFIC LIPID-TRANSFER PROTEIN 1 PRECURSOR (LTP 1) - NICOTIANA TABACUM (COMMON TOBACCO).
NLT2_BRANA NONSPECIFIC LIPID-TRANSFER PROTEIN 2 PRECURSOR (LTP 2) - BRASSICA NAPUS (RAPE).
NLT2_GOSHI NONSPECIFIC LIPID-TRANSFER PROTEIN PRECURSOR (LTP) (GH3) - GOSSYPIUM HIRSUTUM (UPLAND COTTON).
NLT2_LYCES NONSPECIFIC LIPID-TRANSFER PROTEIN 2 PRECURSOR (LTP 2) - LYCOPERSICON ESCULENTUM (TOMATO).
NLT2_ORYSA NONSPECIFIC LIPID-TRANSFER PROTEIN 2 PRECURSOR (LTP 2) - ORYZA SATIVA (RICE).
NLT2_SORVU NONSPECIFIC LIPID-TRANSFER PROTEIN 2 PRECURSOR (LTP 2) - SORGHUM VULGARE (SORGHUM).
NLT2_TOBAC NONSPECIFIC LIPID-TRANSFER PROTEIN 2 PRECURSOR (LTP 2) - NICOTIANA TABACUM (COMMON TOBACCO).
NLT3_BRANA NONSPECIFIC LIPID-TRANSFER PROTEIN 3 PRECURSOR (LTP 3) - BRASSICA NAPUS (RAPE).
NLT3_ORYSA NONSPECIFIC LIPID-TRANSFER PROTEIN 3 PRECURSOR (LTP 3) - ORYZA SATIVA (RICE).
NLT3_PRUDU NONSPECIFIC LIPID-TRANSFER PROTEIN 3 PRECURSOR (LTP 3) - PRUNUS DULCIS (ALMOND) (PRUNUS AMYGDALUS).
NLT4_HORVU NONSPECIFIC LIPID-TRANSFER PROTEIN 4.3 PRECURSOR (LTP 4.3) - HORDEUM VULGARE (BARLEY).
NLT5_ORYSA NONSPECIFIC LIPID-TRANSFER PROTEIN 5 PRECURSOR (LTP 5) - ORYZA SATIVA (RICE).
NLT6_GOSHI NONSPECIFIC LIPID-TRANSFER PROTEIN 6 PRECURSOR (LTP) - GOSSYPIUM HIRSUTUM (UPLAND COTTON).
NLTA_BRAOL NONSPECIFIC LIPID-TRANSFER PROTEIN A PRECURSOR (LTP A) (WAX-ASSOCIATED PROTEIN 9A) - BRASSICA OLERACEA (CAULIFLOWER).
NLTA_RICCO NONSPECIFIC LIPID-TRANSFER PROTEIN A (NS-LTP A) (PHOSPHOLIPID TRANSFER PROTEIN) (PLTP) - RICINUS COMMUNIS (CASTOR BEAN).
NLTB_BRAOL NONSPECIFIC LIPID-TRANSFER PROTEIN B PRECURSOR (LTP B) (WAX-ASSOCIATED PROTEIN 9B) - BRASSICA OLERACEA (CAULIFLOWER).
NLTB_RICCO NONSPECIFIC LIPID-TRANSFER PROTEIN B (NS-LTP B) (PHOSPHOLIPID TRANSFER PROTEIN) (PLTP) - RICINUS COMMUNIS (CASTOR BEAN).
NLTC_RICCO NONSPECIFIC LIPID-TRANSFER PROTEIN C, COTYLEDON-SPECIFIC ISOFORM PRECURSOR (NS-LTP C) (PHOSPHOLIPID TRANSFER PROTEIN) (PLTP) - RICINUS COMMUNIS (CASTOR BEAN).
NLTD_BRAOL NONSPECIFIC LIPID-TRANSFER PROTEIN D PRECURSOR (LTP D) (WAX-ASSOCIATED PROTEIN 9D) - BRASSICA OLERACEA (CAULIFLOWER).
NLTD_RICCO NONSPECIFIC LIPID-TRANSFER PROTEIN D, COTYLEDON-SPECIFIC ISOFORM PRECURSOR (NS-LTP D) - RICINUS COMMUNIS (CASTOR BEAN).
NLTP_AMACA NONSPECIFIC LIPID-TRANSFER PROTEIN (LTP) (PHOSPHOLIPID TRANSFER PROTEIN) (PLTP) - AMARANTHUS CAUDATUS (LOVE-LIES-BLEEDING) (INCA-WHEAT).
NLTP_BETVU NONSPECIFIC LIPID-TRANSFER PROTEIN PRECURSOR (LTP) - BETA VULGARIS (SUGAR BEET).
NLTP_CICAR NONSPECIFIC LIPID-TRANSFER PROTEIN PRECURSOR (LTP) - CICER ARIETINUM (CHICKPEA) (GARBANZO).
NLTP_DAUCA NONSPECIFIC LIPID-TRANSFER PROTEIN PRECURSOR (LTP) (EXTRACELLULAR PROTEIN 2) - DAUCUS CAROTA (CARROT).
NLTP_ELECO NONSPECIFIC LIPID-TRANSFER PROTEIN (LTP) (ALPHA-AMYLASE INHIBITOR I- 2) - ELEUSINE CORACANA (INDIAN FINGER MILLET) (RAGI).
NLTP_GERHY NONSPECIFIC LIPID-TRANSFER PROTEIN PRECURSOR (LTP) - GERBERA HYBRIDA.
NLTP_MAIZE NONSPECIFIC LIPID-TRANSFER PROTEIN PRECURSOR (LTP) (PHOSPHOLIPID TRANSFER PROTEIN) (PLTP) - ZEA MAYS (MAIZE).
NLTP_PINTA NONSPECIFIC LIPID-TRANSFER PROTEIN PRECURSOR (LTP) - PINUS TAEDA (LOBLOLLY PINE).
NLTP_SPIOL NONSPECIFIC LIPID-TRANSFER PROTEIN PRECURSOR (LTP) (PHOSPHOLIPID TRANSFER PROTEIN) (PLTP) - SPINACIA OLERACEA (SPINACH).
O22482 LIPID TRANSFER PROTEIN - ORYZA SATIVA (RICE).
O22483 NONSPECIFIC LIPID-TRANSFER PROTEIN (LTP) - ORYZA SATIVA (RICE).
O22485 LIPID TRANSFER PROTEIN LPT IV - ORYZA SATIVA (RICE).
O24037 NONSPECIFIC LIPID-TRANSFER PROTEIN (LTP) - LYCOPERSICON PENNELLII (TOMATO).
O24038 NONSPECIFIC LIPID-TRANSFER PROTEIN (LTP) - LYCOPERSICON PENNELLII (TOMATO).
O24440 NONSPECIFIC LIPID-TRANSFER PROTEIN (LTP) - PHASEOLUS VULGARIS (KIDNEY BEAN) (FRENCH BEAN).
O24485 PRLTP1 - PINUS RADIATA (MONTEREY PINE).
O24583 NONSPECIFIC LIPID-TRANSFER PROTEIN (LTP) - ZEA MAYS (MAIZE).
O49200 NONSPECIFIC LIPID-TRANSFER PROTEIN (LTP) PRECURSOR - GOSSYPIUM HIRSUTUM (UPLAND COTTON).
O82582 NONSPECIFIC LIPID-TRANSFER PROTEIN (LTP) - BRASSICA OLERACEA (CAULIFLOWER).
Q39332 PHOSPHOLIPID TRANSFER PROTEIN PRECURSOR - BRASSICA NAPUS (RAPE).
Q39382 LIPID TRANSFER PROTEIN - BRASSICA OLERACEA (CAULIFLOWER).
Q39404 SIMILAR TO LIPID TRANSFER PROTEIN - BRASSICA RAPA (TURNIP).
Q39950 NONSPECIFIC LIPID-TRANSFER PROTEIN PRECURSOR (LTP) (NSLTP) (SDI-9) - HELIANTHUS ANNUUS (COMMON SUNFLOWER).
Q40453 LIPID TRANSFER PROTEIN - NICOTIANA TABACUM (COMMON TOBACCO).
Q40454 LIPID TRANSFER PROTEIN - NICOTIANA TABACUM (COMMON TOBACCO).
Q42848 NONSPECIFIC LIPID-TRANSFER PROTEIN (LTP) - HORDEUM VULGARE (BARLEY).
Q42849 NONSPECIFIC LIPID-TRANSFER PROTEIN PKG285 PRECURSOR - HORDEUM VULGARE (BARLEY).
Q43762 NONSPECIFIC LIPID-TRANSFER PROTEIN (LTP) PRECURSOR - HORDEUM VULGARE (BARLEY).
Q43766 NONSPECIFIC LIPID-TRANSFER PROTEIN CW20 PRECURSOR - HORDEUM VULGARE (BARLEY).
Q43767 NONSPECIFIC LIPID-TRANSFER PROTEIN CW21 PRECURSOR - HORDEUM VULGARE (BARLEY).
Q43871 NONSPECIFIC LIPID-TRANSFER PROTEIN CW18 PRECURSOR (PKG2316) - HORDEUM VULGARE (BARLEY).
Q43875 NONSPECIFIC LIPID-TRANSFER PROTEIN (LTP) PRECURSOR - HORDEUM VULGARE (BARLEY).

O22484 LIPID TRANSFER PROTEIN LPT III - ORYZA SATIVA (RICE).
O24309 NON-SPECIFIC LIPID TRANSFER PROTEIN - PISUM SATIVUM (GARDEN PEA).

O04004 ALLERGEN AMB A VI - AMBROSIA ARTEMISIIFOLIA (SHORT RAGWEED).
O22272 HYPOTHETICAL 19.6 KD PROTEIN - ARABIDOPSIS THALIANA (MOUSE-EAR CRESS).

AMP1_ALLCE ANTIMICROBIAL PROTEIN ACE-AMP1 PRECURSOR - ALLIUM CEPA (ONION).
BLT4_HORVU BLT4 PROTEIN PRECURSOR - HORDEUM VULGARE (BARLEY).
O49116 ATA7 - ARABIDOPSIS THALIANA (MOUSE-EAR CRESS).
Q43018 LIPID TRANSFER PROTEIN - PRUNUS DULCIS (ALMOND) (PRUNUS AMYGDALUS).
Scan History
OWL26_0    2  200  NSINGLE    
SPTR37_9f 2 133 NSINGLE
Initial Motifs
Motif 1  width=17
Element Seqn Id St Int Rpt
NCGQVDSKMKPCLTYVQ NLT1_HORVU 28 28 -
DCGQVNSSLASCIPFLT NLTA_RICCO 2 2 -
NCGQVNKALSSCVPFLT NLTB_RICCO 2 2 -
PCSTVDMKAAACVGFAT NLTC_RICCO 27 27 -
DCGHVDSLVRPCLSYVQ NLTA_WHEAT 25 25 -
SCGQVASAIAPCISYAR NLTP_MAIZE 30 30 -
TCGQVTGALAPCLGYLR NLTP_DAUCA 29 29 -

Motif 2 width=15
Element Seqn Id St Int Rpt
GPSGECCNGVRDLHN NLT1_HORVU 48 3 -
TPSLTCCAGVMELKR NLTB_RICCO 23 4 -
GPSGQCCDGVKNLHN NLTA_WHEAT 45 3 -
KPSQACCTGLQQLAQ NLTC_RICCO 48 4 -
GPSAGCCSGVRSLNN NLTP_MAIZE 51 4 -
PVPLTCCNVVRGLNN NLTP_DAUCA 51 5 -
SPSASCCAGVQNLKT NLTA_RICCO 23 4 -

Motif 3 width=16
Element Seqn Id St Int Rpt
DRRAACNCLKNAAAGV NLTP_MAIZE 72 6 -
DRQSACNCLKGIARGI NLTA_WHEAT 66 6 -
DKRTACGCLKQTANAV NLTP_DAUCA 72 6 -
DRQTVCNCLKGIARGI NLT1_HORVU 69 6 -
DRRAACECIKAAAARF NLTA_RICCO 44 6 -
DKRIACECVKTAAARY NLTB_RICCO 44 6 -
DKKAICRCLKASSKSL NLTC_RICCO 69 6 -

Motif 4 width=18
Element Seqn Id St Int Rpt
GIKDQFLSKIPAACNIKV NLTC_RICCO 85 0 -
GLNAGNAASIPSKCGVSI NLTP_MAIZE 89 1 -
GLNLNAAAGLPARCGVNI NLTP_DAUCA 89 1 -
NLNEDNARSIPPKCGVNL NLTA_WHEAT 83 1 -
NLNLNNAASIPSKCNVNV NLT1_HORVU 86 1 -
TIKQDAASSLPKKCGVDI NLTA_RICCO 61 1 -
NIREDAASSLPYKCGVVI NLTB_RICCO 61 1 -

Motif 5 width=12
Element Seqn Id St Int Rpt
NIPISKTTNCQA NLTA_RICCO 79 0 -
GFPVSTNTNCET NLTC_RICCO 103 0 -
PYTISTSTDCSR NLTP_MAIZE 107 0 -
PYTISLNIDCSR NLTA_WHEAT 101 0 -
PYKISPTTDCNR NLTP_DAUCA 107 0 -
PYTISPDIDCSR NLT1_HORVU 104 0 -
NVPISKTTNCHE NLTB_RICCO 79 0 -
Final Motifs
Motif 1  width=17
Element Seqn Id St Int Rpt
SCGQVASAIAPCISYAR NLTP_MAIZE 30 30 -
TCGQVSSAIGPCLSYAR NLT2_SORVU 32 32 -
SCGQVSSSLAPCISYLT Q39950 27 27 -
SCGQVSSAIALCLSYAR NLT1_SORVU 28 28 -
TCGQVSSAIAPCLSYAR O24583 31 31 -
SCGQVNSAVSPCLSYAR NLT2_ORYSA 29 29 -
SCGQVNSAVSPCLSYAR NLT3_ORYSA 29 29 -
SCGQVNSAVSPCLSYPR O22483 29 29 -
SCGQVNSAVSPCLSYAR O22482 26 26 -
TCGQVTSNLAPCLAYLR NLT1_TOBAC 26 26 -
TCGQVTSSLAPCIGYLT O49200 29 29 -
TCGQVNSAVGPCLTYAR NLT1_ORYSA 27 27 -
SCGQVSSALSPCISYAR Q43767 28 28 -
SCGQVQSGLAPCLPYLQ NLT2_TOBAC 26 26 -
SCGQVSSALSPCISYAR NLT4_HORVU 28 28 -
SCGQVSSALSPCISYAR Q43875 28 28 -
TCGQVNSAVGPCLTYAR O22485 27 27 -
SCGEVTSGLAPCLPYLE NLT1_LYCES 26 26 -
TCGQVTSTLAPCLPYLM O24038 26 26 -
SCGQVSSALRPCISYAS Q42849 28 28 -
TCGRVDTALAPCLGYLQ NLTP_CICAR 26 26 -
SCGQVSSALRPCISYAS Q43762 28 28 -
TCGQVTAGLAPCLPYLQ NLT2_LYCES 26 26 -
TCGLVASKLAPCIGYLQ NLTP_BETVU 28 28 -
TCGQVTAGLAPCLPYLQ O24037 26 26 -
TSGQVTNSLAPCINYLR NLT1_GOSHI 25 25 -
TSGQVTNSLAPCINYLR NLT2_GOSHI 29 29 -
SCGQVSSALSPCISYAR Q43766 28 28 -
TCGMVSSKLAPCIGYLK NLTP_SPIOL 29 29 -
SCGSVNSNLAACIGYVL NLT1_ARATH 28 28 -
SCGTVSGYVAPCIGYLT NLT2_BRANA 28 28 -
SCGTVSGNLAACIGYLT NLTB_BRAOL 28 28 -
SCGTVSGNLAACIGYLT NLT1_BRANA 28 28 -
TCGQVSSALGPCAAYAK Q43871 28 28 -
SCGQVVNNLTPCINYVA NLT3_PRUDU 32 32 -
TCGTVNSNVAPCIGYIT O82582 28 28 -
SCGTVSGNLAACIGYLT NLT3_BRANA 28 28 -
SCGTVSGYVAPCIGYLA NLTD_BRAOL 28 28 -
TCGQVSSALAPCIPYVR NLT1_PRUPE 2 2 -
SCGQVDSKLAPCVAYVT Q42848 32 32 -
TCGQVSSNLAPCIPYVR NLT1_PRUDU 28 28 -
TCGTVNSNVAPCIGYIT NLTA_BRAOL 28 28 -
TCGQVTGALAPCLGYLR NLTP_DAUCA 29 29 -
SCGQVSSAIGPCLAYAR NLTP_ELECO 3 3 -
SCGTVNTNVAACIGYLT Q39382 28 28 -
TCGQVVSTWAPCIMYAD NLT5_ORYSA 27 27 -
SCGQVTSSLASCIPFLT O24440 28 28 -
NCGQVDSKMKPCLTYVQ NLT1_HORVU 28 28 -
SCGQVTSGLVPCFGYLA NLTP_GERHY 27 27 -
SYDQVKSSLLPCVGYVR NLT6_GOSHI 29 29 -
DCGQVNSSLASCIPFLT NLTA_RICCO 2 2 -
TCGTVTSTMTQCISYLT Q39332 27 27 -
TCGTVTSTMTQCISYLT Q39404 27 27 -
TCTVVTKALGPCMTYLK NLTP_AMACA 3 3 -
SCNQVVSAMTPCATYLI NLTP_PINTA 33 33 -
NCGQVNKALSSCVPFLT NLTB_RICCO 2 2 -
SCQTVTTQLAPCLSYIQ Q40453 24 24 -
SCPTVTTQLAPCLSYIQ Q40454 26 26 -
PCGKVVHHIMPCLKFVK NL22_PARJU 34 34 -
TCGTVVGALMPCLPFVQ NL13_PARJU 39 39 -
TCGTVVRALMPCLPFVQ NL12_PARJU 40 40 -
ACGKVVQDIMPCLHFVK NL21_PARJU 34 34 -
PCSTVDMKAAACVGFAT NLTC_RICCO 27 27 -
PCSTVDMKAAACVGFAT NLTD_RICCO 27 27 -
DCNTIIQQITSCATYLT O24485 35 35 -

Motif 2 width=15
Element Seqn Id St Int Rpt
GPSAGCCSGVRSLNN NLTP_MAIZE 51 4 -
GPSAGCCSGVRSLNS NLT2_SORVU 53 4 -
AVPPACCSGVKSLNS Q39950 47 3 -
APSAGCCSGVRSLNS NLT1_SORVU 49 4 -
GPSASCCSGVRNLKS O24583 52 4 -
GPSAACCSGVRSLNS NLT2_ORYSA 49 3 -
RPSAACCSGVRSLNS NLT3_ORYSA 48 2 -
GPSAACCSGVRNLNS O22483 49 3 -
GPSAACCSGVRNLNS O22482 46 3 -
GPLGRCCGGVKALVN NLT1_TOBAC 45 2 -
GVPPGCCGGIKSLNS O49200 51 5 -
GPSAACCSGVRSLFA NLT1_ORYSA 47 3 -
KPPAACCSGVKRLAG Q43767 49 4 -
GPLGSCCGGVKGLLG NLT2_TOBAC 45 2 -
KPPVACCSGVKRLAG NLT4_HORVU 49 4 -
KPPVACCSGVKRLAG Q43875 49 4 -
GPSAACCSGVRSLKA O22485 47 3 -
GPLGGCCGGVKGLLG NLT1_LYCES 45 2 -
GPLGGCCGGVKGLLG O24038 45 2 -
ILPPACCSGVKRLAG Q42849 49 4 -
GPSAQCCGGVRNLNS NLTP_CICAR 46 3 -
ILPPACCSGVKRLAG Q43762 49 4 -
GPLGGCCGGVKNLLG NLT2_LYCES 45 2 -
GPSAACCGGIKSLNS NLTP_BETVU 48 3 -
GPLGGCCGGVKGLLG O24037 45 2 -
AVPPGCCTGIKSLNS NLT1_GOSHI 47 5 -
AVPPGCCTGIKSLNS NLT2_GOSHI 51 5 -
KPPVACCSGVKRLAG Q43766 49 4 -
PLGGGCCGGIKALNA NLTP_SPIOL 48 2 -
VIPPACCSGVKNLNS NLT1_ARATH 48 3 -
PLPRGCCTGVTNLNN NLT2_BRANA 48 3 -
PLPRGCCTGVTNLNN NLTB_BRAOL 48 3 -
PLPRGCCTGVTNLNN NLT1_BRANA 48 3 -
SPSAGCCSGVKRLAG Q43871 49 4 -
ALNPSCCTGVRSLYS NLT3_PRUDU 52 3 -
PLPRACCTGVSKLNS O82582 48 3 -
PVPTACCSGVTSLNN NLT3_BRANA 48 3 -
AVPTACCSGVTSLNN NLTD_BRAOL 49 4 -
AVPPACCNGIRNVNN NLT1_PRUPE 22 3 -
AISKECCSGVQGLNG Q42848 53 4 -
AVPPACCNGIRNVNN NLT1_PRUDU 48 3 -
TLPGACCTGVSKLNS NLTA_BRAOL 48 3 -
PVPLTCCNVVRGLNN NLTP_DAUCA 51 5 -
APSASCQSGVRSLNA NLTP_ELECO 24 4 -
ALPRACCTGVSKLNS Q39382 47 2 -
APTGGCCDGVRTLNS NLT5_ORYSA 48 4 -
AVPASCCSGVRSLNA O24440 48 3 -
GPSGECCNGVRDLHN NLT1_HORVU 48 3 -
PVPPACCNGVRGLNN NLTP_GERHY 47 3 -
PAPPNYCKGIRSLKS NLT6_GOSHI 51 5 -
SPSASCCAGVQNLKT NLTA_RICCO 23 4 -
PLPSSCCVAVKSLNQ Q39332 47 3 -
PLPSSCCVAVKSLNQ Q39404 47 3 -
PPPANCCAGVRSLKA NLTP_AMACA 25 5 -
TPAATCCPSIRGLDS NLTP_PINTA 54 4 -
TPSLTCCAGVMELKR NLTB_RICCO 23 4 -
NPSVPCCTGINNIYE Q40453 48 7 -
DPSVPCCTGINNIYE Q40454 46 3 -
EPSKSCCSGTKKLSE NL22_PARJU 55 4 -
EPSKGCCSGAKRLDG NL13_PARJU 60 4 -
EPSKGCCSGAKRLDG NL12_PARJU 61 4 -
EPSKECCSGTKKLSE NL21_PARJU 55 4 -
KPSQACCTGLQQLAQ NLTC_RICCO 48 4 -
KPSSACCTGLQQLAQ NLTD_RICCO 48 4 -
QEESSCCQGVQSLYG O24485 58 6 -

Motif 3 width=16
Element Seqn Id St Int Rpt
DRRAACNCLKNAAAGV NLTP_MAIZE 72 6 -
DRRAACNCLKNAARGI NLT2_SORVU 74 6 -
DRQAACGCLKSAYNSI Q39950 68 6 -
DRRAACNCLKNAARGI NLT1_SORVU 70 6 -
DRRAACNCLKNAARGV O24583 73 6 -
DRRTACNCLKNVAGSI NLT2_ORYSA 70 6 -
DRRTACNCLKNVAGSI NLT3_ORYSA 69 6 -
DRRTACNCLKNVAGSI O22483 70 6 -
DRRTACNCLKNVAGSI O22482 67 6 -
DRQIACTCLKSAAGAI NLT1_TOBAC 66 6 -
DRQAACKCIKSAAAGI O49200 72 6 -
DRRTACNCLKNAARGI NLT1_ORYSA 68 6 -
DKQAACKCIKSAAGGL Q43767 70 6 -
DRKTACTCLKSAANAI NLT2_TOBAC 66 6 -
DKQAACKCIKSAAGGL NLT4_HORVU 70 6 -
DKQAACKCIKSAAGGL Q43875 70 6 -
DRRTACNCLKNAARGI O22485 68 6 -
DRKTACTCLKSAANSI NLT1_LYCES 66 6 -
DRQTACTCLKSAASSF O24038 66 6 -
DKQAACKCIKSAAGGL Q42849 70 6 -
DRQAACNCLKSAAGSI NLTP_CICAR 67 6 -
DKQAVCKCIKSAAAGL Q43762 70 6 -
DRKTACTCLKSAANAI NLT2_LYCES 66 6 -
DRKTACTCLKSAATSI NLTP_BETVU 69 6 -
DRKTACTCLKSAANAI O24037 66 6 -
VRQAACRCIKSAAAGI NLT1_GOSHI 68 6 -
VRQAACRCIKSAAAGI NLT2_GOSHI 72 6 -
DKQAACRCLKSLATSI Q43766 70 6 -
DRKTACNCLKSAANAI NLTP_SPIOL 69 6 -
DRQQACNCIQGAARAL NLT1_ARATH 69 6 -
DRQQACRCLVGAANSF NLT2_BRANA 69 6 -
DRQQACRCLVGAANSF NLTB_BRAOL 69 6 -
DRQQACRCLVGAANAF NLT1_BRANA 69 6 -
DKQATCRCLKSVAGAY Q43871 70 6 -
DRQSICNCLKQAVNGI NLT3_PRUDU 73 6 -
DRQQACRCLKTAASAL O82582 69 6 -
DRQQACRCLVGAANAL NLT3_BRANA 69 6 -
DRQQACRCLVGAANAL NLTD_BRAOL 70 6 -
DRQAACNCLKQLSASV NLT1_PRUPE 43 6 -
DRQTACRCLKSLATSI Q42848 74 6 -
DRQAACNCLKQLSASV NLT1_PRUDU 69 6 -
DRQQACRCLETAARAL NLTA_BRAOL 69 6 -
DKRTACGCLKQTANAV NLTP_DAUCA 72 6 -
DRRAACNCSLKSAASR NLTP_ELECO 45 6 -
DRQQACRCLKTAASAL Q39382 68 6 -
DRQTTCACLKQQTKAM NLT5_ORYSA 69 6 -
PDRQVCNCLKSAAGAI O24440 68 5 -
DRQTVCNCLKGIARGI NLT1_HORVU 69 6 -
DRQTACGCLKGILAAN NLTP_GERHY 68 6 -
DRQAACKCIKSLAADI NLT6_GOSHI 72 6 -
DRRAACECIKAAAARF NLTA_RICCO 44 6 -
DRRQVCECLKSAGKEI Q39332 68 6 -
DRRQVCECLKSAGKEI Q39404 68 6 -
DRRMACNCMKSAAQKT NLTP_AMACA 46 6 -
DRQAVCNCLKTQAKSY NLTP_PINTA 75 6 -
DKRIACECVKTAAARY NLTB_RICCO 44 6 -
DRVAICNCLKNAFIHA Q40453 69 6 -
DRVAICNCLKTAFTHA Q40454 67 6 -
QKREACKCIVAATKGI NL22_PARJU 76 6 -
QRVHACECIQTAMKTY NL13_PARJU 81 6 -
QRVHACECIQTAMKTY NL12_PARJU 82 6 -
QKREACKCIVRATKGI NL21_PARJU 76 6 -
DKKAICRCLKASSKSL NLTC_RICCO 69 6 -
DKKAICRCLKASSKSL NLTD_RICCO 69 6 -
EIQQICTCLKNEAINY O24485 79 6 -

Motif 4 width=18
Element Seqn Id St Int Rpt
GLNAGNAASIPSKCGVSI NLTP_MAIZE 89 1 -
GLNVGKAASIPSKCGVSI NLT2_SORVU 91 1 -
GVNAGNAASFPGKCGVSI Q39950 85 1 -
GLNAGNAASIPSKCGVSV NLT1_SORVU 87 1 -
GLNAGNAASIPSKCGVSI O24583 90 1 -
GLNAGNAASIPSKCGVTI NLT2_ORYSA 87 1 -
GLNAGNAASIPSKCGVSI NLT3_ORYSA 86 1 -
GLNAGNAASIPSKCGVSI O22483 87 1 -
GLNAGNAASIPSKCGVSI O22482 84 1 -
GINLGKAAGLPSTCGVNI NLT1_TOBAC 83 1 -
GINYGIASGLPGKCGVNI O49200 89 1 -
GLNAGNAASIPSKCGVSV NLT1_ORYSA 85 1 -
GLNAGKAAGIPSMCGVSV Q43767 84 -2 -
GIDMGKAAGLPGACGVNI NLT2_TOBAC 83 1 -
GLNAGKAAGIPSMCGVSV NLT4_HORVU 84 -2 -
GLNAGKAAGIPSMCGVSV Q43875 84 -2 -
GLNAGNAASIPSKCGVSV O22485 85 1 -
GIDTGKAAGLPGVCGVNI NLT1_LYCES 83 1 -
GLDLGKAASLPSTCSVNI O24038 83 1 -
GLNAGKAAGIPSMCGVSV Q42849 84 -2 -
RLNANNAAALPGKCVVNI NLTP_CICAR 84 1 -
GLNAGKAAGIPSKCGVSV Q43762 84 -2 -
GIDLNKAAGIPSVCKVNI NLT2_LYCES 83 1 -
GINYGKAASLPRQCGVSV NLTP_BETVU 86 1 -
GIDLNKAAGIPSVCKVNI O24037 83 1 -
GINFGLASGLPGKCGVNI NLT1_GOSHI 85 1 -
GINFGLASGLPGKCGVNI NLT2_GOSHI 89 1 -
GINMGKVSGVPGKCGVSV Q43766 87 1 -
GINYGKAAGLPGMCGVHI NLTP_SPIOL 86 1 -
GLNAGRAAGIPKACGVNI NLT1_ARATH 87 2 -
TLNAARAAGLPKACGVNI NLT2_BRANA 86 1 -
TLNAARAAGLPKACGVNI NLTB_BRAOL 86 1 -
TLNAARAAGLPKACGVNI NLT1_BRANA 86 1 -
AYNAGRAAGIPSRCGVSV Q43871 84 -2 -
NANAGLAAGLPGKCGVNI NLT3_PRUDU 92 3 -
NLNAGRAAGIPKACGVSV O82582 87 2 -
TINVARAAGLPKACGVNI NLT3_BRANA 86 1 -
TINVARAAGLPKACGVNI NLTD_BRAOL 87 1 -
GVNPNNAAALPGKCGVHI NLT1_PRUPE 60 1 -
AINMGKVSGVPGKCGVSV Q42848 91 1 -
GVNPNNAAALPGKCGVNI NLT1_PRUDU 86 1 -
NLNAGRAAGIPKACGVSV NLTA_BRAOL 87 2 -
GLNLNAAAGLPARCGVNI NLTP_DAUCA 89 1 -
GLNAGKASSIPGRCGVRL NLTP_ELECO 63 2 -
GLNAGRAAGLPKACGVNV Q39382 86 2 -
RLRPDHVAGIPSKCGVNI NLT5_ORYSA 86 1 -
GFNANNAGILPGKCGVSI O24440 85 1 -
NLNLNNAASIPSKCNVNV NLT1_HORVU 86 1 -
RINLNNANSLPGKCGISI NLTP_GERHY 85 1 -
DINYGVAAGLPGQCNVHI NLT6_GOSHI 89 1 -
TIKQDAASSLPKKCGVDI NLTA_RICCO 61 1 -
GLNIDLVAALPTTCGVSL Q39332 85 1 -
GLNIDLVAALPTTCGVSL Q39404 85 1 -
SLNYKVAARLASQCGVRM NLTP_AMACA 63 1 -
GVKLGKAANLPGLCKVTD NLTP_PINTA 91 0 -
NIREDAASSLPYKCGVVI NLTB_RICCO 61 1 -
NVNPTLVAELPKKCGISF Q40453 86 1 -
NVNPTLVAQLPKKCGISF Q40454 84 1 -
GIKNELVAEVPKKCGITT NL22_PARJU 93 1 -
DIDGKLVSEVPKHCGIVD NL13_PARJU 98 1 -
DIDGKLVSEVPKHCGIVD NL12_PARJU 99 1 -
GIKNELVAEVPKKCDIKT NL21_PARJU 93 1 -
GIKDQFLSKIPAACNIKV NLTC_RICCO 85 0 -
GIKDQFLSKIPAACNIKV NLTD_RICCO 85 0 -
NLNDRALQSLPSNCGLQL O24485 95 0 -

Motif 5 width=12
Element Seqn Id St Int Rpt
PYTISTSTDCSR NLTP_MAIZE 107 0 -
PYTISTSTDCSR NLT2_SORVU 109 0 -
PYKISPSTDCSK Q39950 103 0 -
PYTISTSTDCSR NLT1_SORVU 105 0 -
PYTISTSTDCSR O24583 108 0 -
PYTISPSIDCSS NLT2_ORYSA 105 0 -
PYTISPSIDCSR NLT3_ORYSA 104 0 -
PYTISPSIDCSS O22483 105 0 -
PYTISPSVYCSS O22482 102 0 -
PYKISPSTDCSK NLT1_TOBAC 101 0 -
PYKISPSTDCNS O49200 107 0 -
PYTISASIDCSR NLT1_ORYSA 103 0 -
PYAISASVDCSK Q43767 102 0 -
PYKISPSTDCSK NLT2_TOBAC 101 0 -
PYAISASVDCSK NLT4_HORVU 102 0 -
PYAISASVDCSK Q43875 102 0 -
PYTISASIHCSR O22485 103 0 -
PYKISPSTDCST NLT1_LYCES 101 0 -
PYKISPSTDCSK O24038 101 0 -
PYAISASVDCSK Q42849 102 0 -
PYKISTSTNCAT NLTP_CICAR 102 0 -
PYSISTSVDCSK Q43762 102 0 -
PYKISPSTDCST NLT2_LYCES 101 0 -
PYAISPNTNCNA NLTP_BETVU 104 0 -
PYKISPSTDCST O24037 101 0 -
PYKISPSTDCNS NLT1_GOSHI 103 0 -
PYKISPSTDCNS NLT2_GOSHI 107 0 -
PFPISMSTDCNK Q43766 105 0 -
PYAISPSTNCNA NLTP_SPIOL 104 0 -
PYKISTSTNCKT NLT1_ARATH 105 0 -
PYKISKSTNCNS NLT2_BRANA 104 0 -
PYKISKSTNCNS NLTB_BRAOL 104 0 -
PYKISKSTNCNS NLT1_BRANA 104 0 -
PYTISASVDCSK Q43871 102 0 -
PYKISPSTDCKS NLT3_PRUDU 110 0 -
PFPISTNTNCNN O82582 105 0 -
PYKISKTTNCNS NLT3_BRANA 104 0 -
PYKISKTTNCNS NLTD_BRAOL 105 0 -
PYKISASTNCAT NLT1_PRUPE 78 0 -
PFPISMSTDCNK Q42848 109 0 -
PYQISPSTNCAN NLT1_PRUDU 104 0 -
PFPISTNTNCNN NLTA_BRAOL 105 0 -
PYKISPTTDCNR NLTP_DAUCA 107 0 -
PYAISASIDCSR NLTP_ELECO 81 0 -
PFPISLLTRCIN Q39382 104 0 -
PYAISPSTDCSR NLT5_ORYSA 104 0 -
HYNISTSTNCAT O24440 103 0 -
PYTISPDIDCSR NLT1_HORVU 104 0 -
GYKITPNIDCSK NLTP_GERHY 103 0 -
PYKISPSIDCKR NLT6_GOSHI 107 0 -
NIPISKTTNCQA NLTA_RICCO 79 0 -
SYPIGFNTNCDS Q39332 103 0 -
SYPIGFNTNCDS Q39404 103 0 -
SYSVSPNVNCNS NLTP_AMACA 81 0 -
NVPISPNVDCSK NLTP_PINTA 110 1 -
NVPISKTTNCHE NLTB_RICCO 79 0 -
MPPIDKNYDCNT Q40453 105 1 -
MPPIDKNYDCNT Q40454 103 1 -
LPPITADFDCSK NL22_PARJU 112 1 -
LPPIDVNMDCKT NL13_PARJU 118 2 -
LPPIDVNMDCKT NL12_PARJU 119 2 -
LPPITADFDCSK NL21_PARJU 112 1 -
GFPVSTNTNCET NLTC_RICCO 103 0 -
GFPVSTATNCET NLTD_RICCO 103 0 -
SFTITRDIDCSS O24485 113 0 -