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PR00268

Identifier
NGF  [View Relations]  [View Alignment]  
Accession
PR00268
No. of Motifs
4
Creation Date
15-DEC-1993  (UPDATE 02-FEB-2009)
Title
Nerve growth factor signature
Database References
PRINTS; PR01912 BDNFACTOR; PR01914 NEUROTROPHN3; PR01915 NEUROTROPHN4
PRINTS; PR01916 NEUROTROPHN6; PR01913 NGFBETA
PROSITE; PS00248 NGF_1; PS50270 NGF_2
PFAM; PF00243 NGF
PRODOM; PD002052
INTERPRO; IPR002072
PDB; 1BET; 1BTG; 1SG1; 1SGF; 1WWW; 2IFG
SCOP; 1BET; 1BTG; 1SG1; 1SGF; 1WWW; 2IFG
CATH; 1BET; 1BTG; 1SG1; 1SGF; 1WWW; 2IFG
MIM; 162030; 608654
Literature References
1. HOFER, M., PAGLIUSI, S.R., HOHN, A., LEIBROCK, J. AND BARDE, Y.A.
Regional distribution of brain-derived neurotrophic factor messenger RNA in
the adult mouse brain.
EMBO J. 9(8) 2459-2464 (1990).
 
2. KOYAMA, J.I., INOUE, S., IKEDA, K. AND HAYASHI, K.
Purification and amino acid sequence of a nerve growth factor from the
venom of Vipera russelli russelli.
BIOCHIM.BIOPHYS.ACTA 1160 287-292 (1992).
 
3. INOUE, S., ODA, T., KOYAMA, J., IKEDA, K. AND HAYASHI, K.
Amino acid sequences of nerve growth factors derived from cobra venoms.
FEBS LETT. 279(1) 38-40 (1991).

Documentation
During the development of the vertebrate nervous system, many neurons
become redundant (because they have died, failed to connect to target
cells, etc.) and are eliminated. At the same time, developing neurons send
out axon outgrowths that contact their target cells [1]. Such cells control
their degree of innervation (the number of axon connections) by the
secretion of various specific neurotrophic factors that are essential for
neuron survival. One of these is nerve growth factor (NGF), which is
involved in the survival of some classes of embryonic neuron (e.g., peri-
pheral sympathetic neurons) [1]. NGF is mostly found outside the central
nervous system (CNS), but slight traces have been detected in adult CNS
tissues, although a physiological role for this is unknown [1]; it has also
been found in several snake venoms [2,3]. Proteins similar to NGF include
brain-derived neurotrophic factor (BDNF) and neurotrophins 3 to 5, all of
which demonstrate neuron survival and outgrowth activities.
 
NGF is a 4-element fingerprint that provides a signature for the nerve
growth factors. The fingerprint was derived from an initial alignment of 34
sequences: the motifs were drawn from conserved regions in the C-terminal
portion of the alignment, each including at least one of 6 Cys residues
involved in disulphide bond formation - motifs 2 and 3 span the regions
encoded by PROSITE pattern NGF (PS00248). Two iterations on OWL22.1 were
required to reach convergence, at which point a true set comprising 28
sequences was identified.
 
An update on SPTR55_38f identified a true set of 117 sequences and three
partial matches: Q6YNR1_HUMAN is human brain-derived neurotrophic factor
BDNF, which fails to make a significant match with motif 2; and 
Q19TV5_BRAFL and Q19TV4_STRPU are prepro-neurotrophins from Branchiostoma
floridae and Strongylocentrotus purpuratus, both of which fail to make
signficant matches with motifs 1 and 2.
Summary Information
 117 codes involving  4 elements
1 codes involving 3 elements
2 codes involving 2 elements
Composite Feature Index
4117117117117
31011
20022
1234
True Positives
A1A4E5_HUMAN  A2AII2_MOUSE  A2ICR4_AMBME  A3FPG9_XENTR  
A4L7M3_BOMOR A4L7M4_9SALA A4L7M5_SALSL A6MFL5_DEMVE
A6MFL6_DEMVE A6MFL7_DEMVE A7LA85_HUMAN A7LA92_HUMAN
BDNF_AILFU BDNF_AILME BDNF_BOVIN BDNF_CANFA
BDNF_CHICK BDNF_CYPCA BDNF_FELCA BDNF_HORSE
BDNF_HUMAN BDNF_LIPVE BDNF_MOUSE BDNF_PANTR
BDNF_PIG BDNF_PROLO BDNF_RAT BDNF_SELTH
BDNF_SPECI BDNF_URSAR BDNF_URSML BDNF_XIPMA
NGFV1_HOPST NGFV1_NAJSP NGFV1_NOTSC NGFV1_OXYMI
NGFV1_PSEAU NGFV1_PSETE NGFV1_TROCA NGFV2_HOPST
NGFV2_NAJSP NGFV2_NOTSC NGFV2_OXYMI NGFV2_PSEAU
NGFV2_PSETE NGFV2_TROCA NGFV3_NOTSC NGFV3_PSEAU
NGFV3_TROCA NGFV4_TROCA NGFV5_TROCA NGFV_BOTJR
NGFV_CRODU NGFV_NAJAT NGFV_NAJKA NGFV_PSEPO
NGFV_VIPLE NGF_BOVIN NGF_BUNMU NGF_CAVPO
NGF_CHICK NGF_DABRR NGF_DANRE NGF_GORGO
NGF_HUMAN NGF_MOUSE NGF_NAJNA NGF_PANTR
NGF_PONPY NGF_PRANA NGF_RAT NGF_SAIBB
NGF_XENLA NGF_XIPMA NT3_CHICK NT3_HUMAN
NT3_MOUSE NT3_RAT NT3_XENLA NT4_HUMAN
NT4_RAT NT4_XENLA NTF3_BOVIN NTF3_FELCA
NTF3_PIG NTF4_MOUSE O70183 O73797
Q06B76_DICLA Q1W7Q6_9SAUR Q3I5F4_9SAUR Q3V1A4_MOUSE
Q4JHT7_POEGU Q541P3_MOUSE Q598Q1_HUMAN Q63ZM5_XENLA
Q6DN19_HUMAN Q6GLW9_XENLA Q6LDU8_MOUSE Q6NZ01_DANRE
Q6VZP8_CNPV Q6YNR2_HUMAN Q6YNR3_HUMAN Q70H82_FOWPV
Q789C7_XIPHE Q8AV78_NIPNI Q8CCH9_MOUSE Q8JGW4_PAROL
Q8QG74_9SAUR Q8QG75_9SAUR Q8QG76_9SAUR Q8QG77_9SALA
Q8VHH4_MOUSE Q91988 Q9J5D9_FOWPV Q9XY95_LAMFL
Q9YH42_DANRE
True Positive Partials
Codes involving 3 elements
Q6YNR1_HUMAN
Codes involving 2 elements
Q19TV4_STRPU Q19TV5_BRAFL
Sequence Titles
A1A4E5_HUMAN Nerve growth factor, beta polypeptide - Homo sapiens (Human). 
A2AII2_MOUSE Brain derived neurotrophic factor - Mus musculus (Mouse).
A2ICR4_AMBME Brain-derived neurotrophic factor - Ambystoma mexicanum (Axolotl).
A3FPG9_XENTR Brain-derived neurotrophic factor - Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
A4L7M3_BOMOR Brain-derived neurotrophic factor - Bombina orientalis (Oriental fire-bellied toad).
A4L7M4_9SALA Brain-derived neurotrophic factor - Pleurodeles poireti (Algerian ribbed newt).
A4L7M5_SALSL Brain-derived neurotrophic factor - Salamandra salamandra (European fire salamander).
A6MFL5_DEMVE Venom nerve growth factor variant 1 precursor - Demansia vestigiata (Lesser black whip snake) (Demansia atra).
A6MFL6_DEMVE Venom nerve growth factor variant 2 precursor - Demansia vestigiata (Lesser black whip snake) (Demansia atra).
A6MFL7_DEMVE Venom nerve growth factor variant 3 precursor - Demansia vestigiata (Lesser black whip snake) (Demansia atra).
A7LA85_HUMAN Brain derived neurotrophic factor variant - Homo sapiens (Human).
A7LA92_HUMAN Brain derived neurotrophic factor variant - Homo sapiens (Human).
BDNF_AILFU Brain-derived neurotrophic factor precursor (BDNF) - Ailurus fulgens (Lesser panda) (Red panda).
BDNF_AILME Brain-derived neurotrophic factor precursor (BDNF) - Ailuropoda melanoleuca (Giant panda).
BDNF_BOVIN Brain-derived neurotrophic factor precursor (BDNF) - Bos taurus (Bovine).
BDNF_CANFA Brain-derived neurotrophic factor precursor (BDNF) - Canis familiaris (Dog).
BDNF_CHICK Brain-derived neurotrophic factor precursor (BDNF) - Gallus gallus (Chicken).
BDNF_CYPCA Brain-derived neurotrophic factor precursor (BDNF) - Cyprinus carpio (Common carp).
BDNF_FELCA Brain-derived neurotrophic factor precursor (BDNF) - Felis silvestris catus (Cat).
BDNF_HORSE Brain-derived neurotrophic factor precursor (BDNF) - Equus caballus (Horse).
BDNF_HUMAN Brain-derived neurotrophic factor precursor (BDNF) (Abrineurin) - Homo sapiens (Human).
BDNF_LIPVE Brain-derived neurotrophic factor precursor (BDNF) - Lipotes vexillifer (Yangtze river dolphin).
BDNF_MOUSE Brain-derived neurotrophic factor precursor (BDNF) - Mus musculus (Mouse).
BDNF_PANTR Brain-derived neurotrophic factor precursor (BDNF) - Pan troglodytes (Chimpanzee).
BDNF_PIG Brain-derived neurotrophic factor precursor (BDNF) - Sus scrofa (Pig).
BDNF_PROLO Brain-derived neurotrophic factor precursor (BDNF) - Procyon lotor (Raccoon).
BDNF_RAT Brain-derived neurotrophic factor precursor (BDNF) - Rattus norvegicus (Rat).
BDNF_SELTH Brain-derived neurotrophic factor precursor (BDNF) - Selenarctos thibetanus (Asiatic black bear).
BDNF_SPECI Brain-derived neurotrophic factor precursor (BDNF) - Spermophilus citellus (European suslik) (Citellus citellus).
BDNF_URSAR Brain-derived neurotrophic factor precursor (BDNF) - Ursus arctos (Brown bear) (Grizzly bear).
BDNF_URSML Brain-derived neurotrophic factor precursor (BDNF) - Ursus malayanus (Malayan sun bear) (Helarctos malayanus).
BDNF_XIPMA Brain-derived neurotrophic factor precursor (BDNF) - Xiphophorus maculatus (Southern platyfish).
NGFV1_HOPST Venom nerve growth factor 1 precursor (vNGF-1) - Hoplocephalus stephensii (Stephens' banded snake).
NGFV1_NAJSP Venom nerve growth factor 1 precursor (vNGF-1) (Nerve growth factor I) - Naja sputatrix (Malayan spitting cobra).
NGFV1_NOTSC Venom nerve growth factor 1 precursor (vNGF-1) - Notechis scutatus scutatus (Mainland tiger snake) (Common tiger snake).
NGFV1_OXYMI Venom nerve growth factor 1 precursor (vNGF-1) - Oxyuranus microlepidotus (Inland taipan).
NGFV1_PSEAU Venom nerve growth factor 1 precursor (vNGF-1) - Pseudechis australis (Mulga snake) (King brown snake).
NGFV1_PSETE Venom nerve growth factor 1 precursor (vNGF-1) - Pseudonaja textilis (Eastern brown snake).
NGFV1_TROCA Venom nerve growth factor 1 precursor (vNGF-1) - Tropidechis carinatus (Australian rough-scaled snake).
NGFV2_HOPST Venom nerve growth factor 2 precursor (vNGF-2) - Hoplocephalus stephensii (Stephens' banded snake).
NGFV2_NAJSP Venom nerve growth factor 2 precursor (vNGF-2) (Nerve growth factor II) - Naja sputatrix (Malayan spitting cobra).
NGFV2_NOTSC Venom nerve growth factor 2 precursor (vNGF-2) - Notechis scutatus scutatus (Mainland tiger snake) (Common tiger snake).
NGFV2_OXYMI Venom nerve growth factor 2 precursor (vNGF-2) - Oxyuranus microlepidotus (Inland taipan).
NGFV2_PSEAU Venom nerve growth factor 2 precursor (vNGF-2) - Pseudechis australis (Mulga snake) (King brown snake).
NGFV2_PSETE Venom nerve growth factor 2 precursor (vNGF-2) - Pseudonaja textilis (Eastern brown snake).
NGFV2_TROCA Venom nerve growth factor 2 precursor (vNGF-2) - Tropidechis carinatus (Australian rough-scaled snake).
NGFV3_NOTSC Venom nerve growth factor 3 precursor (vNGF-3) - Notechis scutatus scutatus (Mainland tiger snake) (Common tiger snake).
NGFV3_PSEAU Venom nerve growth factor 3 precursor (vNGF-3) - Pseudechis australis (Mulga snake) (King brown snake).
NGFV3_TROCA Venom nerve growth factor 3 precursor (vNGF-3) - Tropidechis carinatus (Australian rough-scaled snake).
NGFV4_TROCA Venom nerve growth factor 4 precursor (vNGF-4) - Tropidechis carinatus (Australian rough-scaled snake).
NGFV5_TROCA Venom nerve growth factor 5 precursor (vNGF-5) - Tropidechis carinatus (Australian rough-scaled snake).
NGFV_BOTJR Venom nerve growth factor precursor (vNGF) (Bj-NGF) - Bothrops jararacussu (Jararacussu).
NGFV_CRODU Venom nerve growth factor precursor (vNGF) - Crotalus durissus terrificus (South American rattlesnake).
NGFV_NAJAT Venom nerve growth factor (v-NGF) - Naja atra (Chinese cobra).
NGFV_NAJKA Venom nerve growth factor (v-NGF) - Naja kaouthia (Monocled cobra) (Naja siamensis).
NGFV_PSEPO Venom nerve growth factor precursor (vNGF) - Pseudechis porphyriacus (Red-bellied black snake).
NGFV_VIPLE Venom nerve growth factor precursor (v-NGF) - Vipera lebetina (Elephant snake) (Leventine viper).
NGF_BOVIN Beta-nerve growth factor precursor (Beta-NGF) - Bos taurus (Bovine).
NGF_BUNMU NERVE GROWTH FACTOR PRECURSOR (NGF) - BUNGARUS MULTICINCTUS (MANY-BANDED KRAIT).
NGF_CAVPO Beta-nerve growth factor precursor (Beta-NGF) - Cavia porcellus (Guinea pig).
NGF_CHICK Beta-nerve growth factor precursor (Beta-NGF) - Gallus gallus (Chicken).
NGF_DABRR NERVE GROWTH FACTOR (NGF) - DABOIA RUSSELLI RUSSELLI (RUSSELL'S VIPER) (VIPERA RUSSELLI RUSSELLI).
NGF_DANRE Nerve growth factor precursor (NGF) (zNGF) - Danio rerio (Zebrafish) (Brachydanio rerio).
NGF_GORGO Beta-nerve growth factor precursor (Beta-NGF) - Gorilla gorilla gorilla (Lowland gorilla).
NGF_HUMAN Beta-nerve growth factor precursor (Beta-NGF) - Homo sapiens (Human).
NGF_MOUSE Beta-nerve growth factor precursor (Beta-NGF) - Mus musculus (Mouse).
NGF_NAJNA NERVE GROWTH FACTOR (NGF) - NAJA NAJA (INDIAN COBRA).
NGF_PANTR Beta-nerve growth factor precursor (Beta-NGF) - Pan troglodytes (Chimpanzee).
NGF_PONPY Beta-nerve growth factor precursor (Beta-NGF) - Pongo pygmaeus (Orangutan).
NGF_PRANA Beta-nerve growth factor precursor (Beta-NGF) - Praomys natalensis (African soft-furred rat) (Mastomys natalensis).
NGF_RAT Beta-nerve growth factor precursor (Beta-NGF) - Rattus norvegicus (Rat).
NGF_SAIBB Beta-nerve growth factor precursor (Beta-NGF) - Saimiri boliviensis boliviensis (Bolivian squirrel monkey).
NGF_XENLA Nerve growth factor precursor (NGF) - Xenopus laevis (African clawed frog).
NGF_XIPMA Nerve growth factor precursor (NGF) - Xiphophorus maculatus (Southern platyfish).
NT3_CHICK NEUROTROPHIN-3 PRECURSOR (NT-3) (NEUROTROPHIC FACTOR) (HDNF) (NERVE GROWTH FACTOR 2) (NGF-2) - GALLUS GALLUS (CHICKEN).
NT3_HUMAN NEUROTROPHIN-3 PRECURSOR (NT-3) (NEUROTROPHIC FACTOR) (HDNF) (NERVE GROWTH FACTOR 2) (NGF-2) - HOMO SAPIENS (HUMAN).
NT3_MOUSE NEUROTROPHIN-3 PRECURSOR (NT-3) (NEUROTROPHIC FACTOR) (HDNF) (NERVE GROWTH FACTOR 2) (NGF-2) - MUS MUSCULUS (MOUSE).
NT3_RAT NEUROTROPHIN-3 PRECURSOR (NT-3) (NEUROTROPHIC FACTOR) (HDNF) (NERVE GROWTH FACTOR 2) (NGF-2) - RATTUS NORVEGICUS (RAT).
NT3_XENLA NEUROTROPHIN-3 PRECURSOR (NT-3) (NEUROTROPHIC FACTOR) (HDNF) (NERVE GROWTH FACTOR 2) (NGF-2) - XENOPUS LAEVIS (AFRICAN CLAWED FROG).
NT4_HUMAN NEUROTROPHIN-4 PRECURSOR (NT-4) (NEUROTROPHIN-5) - HOMO SAPIENS (HUMAN).
NT4_RAT NEUROTROPHIN-4 PRECURSOR (NT-4) (NEUROTROPHIN-5) (NT-5) - RATTUS NORVEGICUS (RAT).
NT4_XENLA NEUROTROPHIN-4 PRECURSOR (NT-4) - XENOPUS LAEVIS (AFRICAN CLAWED FROG).
NTF3_BOVIN Neurotrophin-3 precursor (NT-3) - Bos taurus (Bovine).
NTF3_FELCA Neurotrophin-3 precursor (NT-3) (Neurotrophic factor) (HDNF) (Nerve growth factor 2) (NGF-2) - Felis silvestris catus (Cat).
NTF3_PIG Neurotrophin-3 precursor (NT-3) - Sus scrofa (Pig).
NTF4_MOUSE Neurotrophin-4 precursor (NT-4) (Neutrophic factor 4) (Neurotrophin-5) (NT-5) - Mus musculus (Mouse).
O70183 BRAIN-DERIVED NEUROTROPHIC FACTOR - CAVIA PORCELLUS (GUINEA PIG).
O73797 NEUROTROPHIN-7 - BRACHYDANIO RERIO (ZEBRAFISH) (ZEBRA DANIO).
Q06B76_DICLA Brain-derived neurotrophic factor - Dicentrarchus labrax (European sea bass).
Q1W7Q6_9SAUR Venom nerve growth factor preproprotein precursor - Rhinoplocephalus nigrescens.
Q3I5F4_9SAUR Venom nerve growth factor precursor - Oxyuranus scutellatus.
Q3V1A4_MOUSE 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4833409A05 product:neurotrophin 3, full insert sequence - Mus musculus (Mouse).
Q4JHT7_POEGU BDNF - Poephila guttata (Zebra finch) (Taeniopygia guttata).
Q541P3_MOUSE Brain-derived neurotrophic factor BDNF1 (Brain-derived neurotrophic factor transcript variant I) (Brain-derived neurotrophic factor transcript variant IIA) (Brain-derived neurotrophic factor transcript variant IIB) (Brain-derived neurotrophic factor transcript variant IIC) (Brain-derived neurotrophic factor transcript variant IV) (Brain- derived neurotrophic factor transcript variant VI) (Brain-derived neurotrophic factor transcript variant III) (Brain-derived neurotrophic factor transcript variant V) (Brain-derived neurotrophic factor transcript variant VII) (Brain-derived neurotrophic factor transcript variant VIII) (Brain-derived neurotrophic factor transcript variant IXA) (Brain derived neurotrophic factor) (Brain-derived neurotrophic factor BDNF6B) (Brain-derived neurotrophic factor BDNF6A) (Brain-derived neurotrophic factor BDNF5) (Brain-derived neurotrophic factor BDNF4) (Brain-derived neurotrophic factor BDNF3) (Brain-derived neurotrophic factor BDNF2C) (Brain-derived neurotrophic factor BDNF2B) (Brain-derived neurotrophic factor BDNF2A) - Mus musculus (Mouse).
Q598Q1_HUMAN Brain-derived neurotrophic factor BDNF2B (Brain-derived neurotrophic factor, isoform CRA_a) (Brain derived neurotrophic factor transcript IIa) (Brain derived neurotrophic factor transcript IIb) (Brain derived neurotrophic factor transcript IIc) (Brain derived neurotrophic factor transcript III) (Brain derived neurotrophic factor transcript IV) (Brain derived neurotrophic factor variant) (cDNA FLJ77010, highly similar to Homo sapiens brain-derived neurotrophic factor (BDNF), transcript variant 4, mRNA) (Brain-derived neurotrophic factor BDNF6A) (Brain-derived neurotrophic factor BDNF5) (Brain-derived neurotrophic factor BDNF4) (Brain-derived neurotrophic factor BDNF3) (Brain-derived neurotrophic factor BDNF2C) (Brain-derived neurotrophic factor BDNF2A) (Brain-derived neurotrophic factor) - Homo sapiens (Human).
Q63ZM5_XENLA Bdnf protein (Brain derived neurotrophic factor) - Xenopus laevis (African clawed frog).
Q6DN19_HUMAN Brain-derived neurotrophic factor transcript variant 5 - Homo sapiens (Human).
Q6GLW9_XENLA MGC84157 protein - Xenopus laevis (African clawed frog).
Q6LDU8_MOUSE Nerve growth factor (Lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730006F04 product:nerve growth factor, beta, full insert sequence) - Mus musculus (Mouse).
Q6NZ01_DANRE Brain-derived neurotrophic factor (Bdnf protein) - Danio rerio (Zebrafish) (Brachydanio rerio).
Q6VZP8_CNPV CNPV099 beta-NGF-like protein - Canarypox virus (CNPV).
Q6YNR2_HUMAN Brain-derived neurotrophic factor BDNF6B (Brain-derived neurotrophic factor, isoform CRA_b) (Brain derived neurotrophic factor variant) - Homo sapiens (Human).
Q6YNR3_HUMAN Brain-derived neurotrophic factor BDNF1 (Brain-derived neurotrophic factor, isoform CRA_c) (Brain derived neurotrophic factor variant) (cDNA FLJ77015, highly similar to Homo sapiens brain-derived neurotrophic factor (BDNF), transcript variant 3, mRNA) - Homo sapiens (Human).
Q70H82_FOWPV Putative uncharacterized protein fp9.072 - Fowlpox virus (isolate HP-438[Munich]).
Q789C7_XIPHE Neurotrophin-6 precursor - Xiphophorus helleri (Green swordtail).
Q8AV78_NIPNI Brain-derived neurotrophic factor - Nipponia nippon (Crested ibis).
Q8CCH9_MOUSE 15 days embryo male testis cDNA, RIKEN full-length enriched library, clone:8030442P22 product:brain derived neurotrophic factor, full insert sequence - Mus musculus (Mouse).
Q8JGW4_PAROL Brain-derived neurotrophic factor BDNF - Paralichthys olivaceus (Japanese flounder).
Q8QG74_9SAUR Brain derived neurotrophic factor - Cyclophiops major.
Q8QG75_9SAUR Brain derived neurotrophic factor - Phrynocephalus hongyuanensis.
Q8QG76_9SAUR Brain derived neurotrophic factor - Japalura splendida.
Q8QG77_9SALA Brain derived neurotrophic factor - Tylototriton taliangensis (Taliang knobby newt).
Q8VHH4_MOUSE Anorexia BDNF - Mus musculus (Mouse).
Q91988 NEUROTROPHIN-6 PRECURSOR - XIPHOPHORUS MACULATUS (SOUTHERN PLATYFISH), AND XIPHOPHORUS HELLERI.
Q9J5D9_FOWPV ORF FPV072 beta-Nerve growth factor - Fowlpox virus (FPV).
Q9XY95_LAMFL Neurotrophin - Lampetra fluviatilis (River lamprey).
Q9YH42_DANRE Brain-derived neurotrophic factor - Danio rerio (Zebrafish) (Brachydanio rerio).

Q6YNR1_HUMAN Brain-derived neurotrophic factor BDNF7 - Homo sapiens (Human).

Q19TV4_STRPU Prepro-neurotrophin - Strongylocentrotus purpuratus (Purple sea urchin).
Q19TV5_BRAFL Prepro-neurotrophin - Branchiostoma floridae (Florida lancelet) (Amphioxus).
Scan History
SPTR55_38f 3  500  NSINGLE    
Initial Motifs
Motif 1  width=13
Element Seqn Id St Int Rpt
GELSVCDSISEWV BDNF_RAT 138 138 -
GELSVCDSISEWV BDNF_PROLO 136 136 -
GELSVCDSISEWV BDNF_PIG 141 141 -
GELSVCDSISEWV BDNF_PANTR 136 136 -
GELSVCDSISEWV BDNF_MOUSE 138 138 -
GELSVCDSISEWV BDNF_HORSE 136 136 -
GELSVCDSISEWV BDNF_CANFA 136 136 -
GELSVCDSISEWV BDNF_BOVIN 139 139 -
GELSVCDSISEWV BDNF_AILME 136 136 -
GELSVCDSISEWV BDNF_AILFU 136 136 -
GELSVCDSTSEWV BDNF_CHICK 135 135 -
GELSVCDGISEWV BDNF_FELCA 136 136 -
GEHSVCDSISVWV NGFV3_TROCA 134 134 -
GEQSVCDSISEWV NGFV_PSEPO 134 134 -
GEYSVCDSISVWV NGFV1_PSETE 134 134 -
GEHSVCDSISEWV NGFV1_PSEAU 134 134 -
GEHSVCDSISEWV NGFV3_PSEAU 134 134 -
GEHSVCDSISVWV NGF_BUNMU 134 134 -
GEHSVCDSVSVWV NGFV5_TROCA 134 134 -
GEFSVCDSISVWV NGF_BOVIN 131 131 -
GEFSVCDSVSVWV NGF_SAIBB 131 131 -
GEFSVCDSVSVWV NGF_PONPY 131 131 -
GEFSVCDSVSVWV NGF_PANTR 131 131 -
GEFSVCDSVSVWV NGF_HUMAN 131 131 -
GEFSVCDSVSVWV NGF_GORGO 131 131 -
GEFSVCDSVSVWV NGF_PRANA 131 131 -
GEFSVCDSVSVWV NGF_RAT 131 131 -
GEFSVCDSVSMWV NGF_CHICK 134 134 -
GEFSVCDSVSVWV NGF_CAVPO 131 131 -
GEYSVCDSVNVWV NGFV_BOTJR 131 131 -
GEFSVCDSVSVWV NGFV_VIPLE 134 134 -
GEHSVCDSVSAWV NGFV2_NAJSP 134 134 -
GEFSVCDSVSVWV NGF_MOUSE 131 131 -
GEYSVCDSVNVWV NGFV_CRODU 131 131 -

Motif 2 width=11
Element Seqn Id St Int Rpt
LKQYFYETKCN BDNF_RAT 179 28 -
LKQYFYETKCN BDNF_PROLO 177 28 -
LKQYFYETKCN BDNF_PIG 182 28 -
LKQYFYETKCN BDNF_PANTR 177 28 -
LKQYFYETKCN BDNF_MOUSE 179 28 -
LKQYFYETKCN BDNF_HORSE 177 28 -
LKQYFYETKCN BDNF_CANFA 177 28 -
LKQYFYETKCN BDNF_BOVIN 180 28 -
LKQYFYETKCN BDNF_AILME 177 28 -
LKQYFYETKCN BDNF_AILFU 177 28 -
LKQYFYETKCN BDNF_CHICK 176 28 -
LKQYFYETKCN BDNF_FELCA 177 28 -
YKQYFFETKCR NGFV3_TROCA 173 26 -
YKQYFFETKCR NGFV_PSEPO 172 25 -
YKQYFFETKCR NGFV1_PSETE 173 26 -
YKQYFFETKCR NGFV1_PSEAU 172 25 -
YKQYFFETKCR NGFV3_PSEAU 172 25 -
YKQYFFETKCR NGF_BUNMU 173 26 -
YKQYFFETKCR NGFV5_TROCA 173 26 -
FKQYFFETKCR NGF_BOVIN 170 26 -
FKQYFFETKCR NGF_SAIBB 170 26 -
FKQYFFETKCR NGF_PONPY 170 26 -
FKQYFFETKCR NGF_PANTR 170 26 -
FKQYFFETKCR NGF_HUMAN 170 26 -
FKQYFFETKCR NGF_GORGO 170 26 -
FKQYFFETKCR NGF_PRANA 170 26 -
FKQYFFETKCR NGF_RAT 170 26 -
FKQYFFETKCR NGF_CHICK 173 26 -
FKQYFFETKCR NGF_CAVPO 170 26 -
YKQYFFETKCR NGFV_BOTJR 170 26 -
YRQYFFETKCK NGFV_VIPLE 173 26 -
YKQYFFETKCK NGFV2_NAJSP 172 25 -
FRQYFFETKCR NGF_MOUSE 170 26 -
YKQYFFETKCR NGFV_CRODU 170 26 -

Motif 3 width=27
Element Seqn Id St Int Rpt
GCRGIDKRHWNSQCRTTQSYVRALTMD BDNF_RAT 197 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD BDNF_PROLO 195 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD BDNF_PIG 200 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD BDNF_PANTR 195 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD BDNF_MOUSE 197 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD BDNF_HORSE 195 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD BDNF_CANFA 195 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD BDNF_BOVIN 198 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD BDNF_AILME 195 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD BDNF_AILFU 195 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD BDNF_CHICK 194 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD BDNF_FELCA 195 7 -
GCRGIDSRHWNSYCTTTQAYVRALTME NGFV3_TROCA 191 7 -
GCRGIDSSHWNSYCTTTQTFVRALTME NGFV_PSEPO 190 7 -
GCRGIDSRHWNSYCTTTHTFVKALTME NGFV1_PSETE 191 7 -
GCRGIDSRLWNSYCTTTQTFVKALTME NGFV1_PSEAU 190 7 -
GCRGIDSRLWNSYCTTTQTFVKALTME NGFV3_PSEAU 190 7 -
GCRGIDSRHWNSYCTTTDTFVKALTME NGF_BUNMU 191 7 -
GCRGTDSRHWNSYCTTTQTFVRALTME NGFV5_TROCA 191 7 -
GCRGIDAKHWNSYCTTTHTFVKALTMD NGF_BOVIN 188 7 -
GCRGIDSKHWNSYCTTTHTFVKALTMD NGF_SAIBB 188 7 -
GCRGIDSKHWNSYCTTTHTFVKALTMD NGF_PONPY 188 7 -
GCRGIDSKHWNSYCTTTHTFVKALTMD NGF_PANTR 188 7 -
GCRGIDSKHWNSYCTTTHTFVKALTMD NGF_HUMAN 188 7 -
GCRGIDSKHWNSYCTTTHTFVKALTMD NGF_GORGO 188 7 -
GCRGIDSKHWNSYCTTTHTFVKALTTD NGF_PRANA 188 7 -
GCRGIDSKHWNSYCTTTHTFVKALTTD NGF_RAT 188 7 -
GCRGIDAKHWNSYCTTTHTFVKALTME NGF_CHICK 191 7 -
GCRGIDSKHWNSYCTTTHTFVKALTTA NGF_CAVPO 188 7 -
GCRGIDARHWNSYCTTTNTFVKALTME NGFV_BOTJR 188 7 -
GCRGIDAKHWNSYCTTTDTFVRALTME NGFV_VIPLE 191 7 -
GCRGIDSSHWNSYCTETDTFIKALTME NGFV2_NAJSP 190 7 -
GCRGIDSKHWNSYCTTTHTFVKALTTD NGF_MOUSE 188 7 -
GCRGIDARHWNSYCTTTNTFVKALTME NGFV_CRODU 188 7 -

Motif 4 width=13
Element Seqn Id St Int Rpt
WRFIRIDTSCVCT BDNF_RAT 230 6 -
WRFIRIDTSCVCT BDNF_PROLO 228 6 -
WRFIRIDTSCVCT BDNF_PIG 233 6 -
WRFIRIDTSCVCT BDNF_PANTR 228 6 -
WRFIRIDTSCVCT BDNF_MOUSE 230 6 -
WRFIRIDTSCVCT BDNF_HORSE 228 6 -
WRFIRIDTSCVCT BDNF_CANFA 228 6 -
WRFIRIDTSCVCT BDNF_BOVIN 231 6 -
WRFIRIDTSCVCT BDNF_AILME 228 6 -
WRFIRIDTSCVCT BDNF_AILFU 228 6 -
WRFIRIDTSCVCT BDNF_CHICK 227 6 -
WRFIRIDTSCVCT BDNF_FELCA 228 6 -
WRFIRIDTACVCV NGFV3_TROCA 223 5 -
WRFIRIDTACVCV NGFV_PSEPO 222 5 -
WRFIRIDTACVCV NGFV1_PSETE 223 5 -
WRFIRIDTACVCV NGFV1_PSEAU 222 5 -
WRFIRIDTACVCV NGFV3_PSEAU 222 5 -
WRFIRIDTACVCV NGF_BUNMU 223 5 -
WRFIRIDTACVCV NGFV5_TROCA 223 5 -
WRFIRIDTACVCV NGF_BOVIN 220 5 -
WRFIRIDTACVCV NGF_SAIBB 220 5 -
WRFIRIDTACVCV NGF_PONPY 220 5 -
WRFIRIDTACVCV NGF_PANTR 220 5 -
WRFIRIDTACVCV NGF_HUMAN 220 5 -
WRFIRIDTACVCV NGF_GORGO 220 5 -
WRFIRIDTACVCV NGF_PRANA 220 5 -
WRFIRIDTACVCV NGF_RAT 220 5 -
WRFIRIDTACVCV NGF_CHICK 223 5 -
WRFIRIDTACVCV NGF_CAVPO 220 5 -
WRFIRIDTACVCV NGFV_BOTJR 220 5 -
WRFIRIDTACVCV NGFV_VIPLE 223 5 -
WRFIRIDTACVCV NGFV2_NAJSP 222 5 -
WRFIRIDTACVCV NGF_MOUSE 220 5 -
WRFIRIDSACVCV NGFV_CRODU 220 5 -
Final Motifs
Motif 1  width=13
Element Seqn Id St Int Rpt
GELSVCDSISEWV A2AII2_MOUSE 146 146 -
GELSVCDSISEWV Q8VHH4_MOUSE 138 138 -
GELSVCDSISEWV Q6YNR3_HUMAN 144 144 -
GELSVCDSISEWV Q6YNR2_HUMAN 151 151 -
GELSVCDSISEWV Q6DN19_HUMAN 136 136 -
GELSVCDSISEWV Q598Q1_HUMAN 136 136 -
GELSVCDSISEWV Q541P3_MOUSE 138 138 -
GELSVCDSISEWV BDNF_URSML 136 136 -
GELSVCDSISEWV BDNF_URSAR 136 136 -
GELSVCDSISEWV BDNF_SPECI 136 136 -
GELSVCDSISEWV BDNF_SELTH 136 136 -
GELSVCDSISEWV BDNF_RAT 138 138 -
GELSVCDSISEWV BDNF_PROLO 136 136 -
GELSVCDSISEWV BDNF_PIG 141 141 -
GELSVCDSISEWV BDNF_PANTR 136 136 -
GELSVCDSISEWV BDNF_MOUSE 138 138 -
GELSVCDSISEWV BDNF_HUMAN 136 136 -
GELSVCDSISEWV BDNF_HORSE 136 136 -
GELSVCDSISEWV BDNF_CANFA 136 136 -
GELSVCDSISEWV BDNF_BOVIN 139 139 -
GELSVCDSISEWV BDNF_AILME 136 136 -
GELSVCDSISEWV BDNF_AILFU 136 136 -
GELSVCDSISEWV A7LA92_HUMAN 218 218 -
GELSVCDSISEWV A7LA85_HUMAN 165 165 -
GELSVCDSVSEWV O70183 144 144 -
GELSVCDSISEWV A2ICR4_AMBME 136 136 -
GELSVCDSISEWV A4L7M5_SALSL 136 136 -
GELSVCDSISEWV A4L7M4_9SALA 136 136 -
GELSVCDSTSEWV BDNF_CHICK 135 135 -
GELSVCDSTSEWV Q8AV78_NIPNI 135 135 -
GELSVCDSTSEWV Q4JHT7_POEGU 135 135 -
GELSVCDSISEWV BDNF_LIPVE 137 137 -
GELSVCDSISEWV Q8CCH9_MOUSE 138 138 -
GELSVCDSISQWV BDNF_CYPCA 159 159 -
GELSVCDSISQWV Q9YH42_DANRE 159 159 -
GELSVCDSISQWV Q8JGW4_PAROL 158 158 -
GELSVCDSISQWV Q6NZ01_DANRE 159 159 -
GELSVCDSISQWV Q06B76_DICLA 158 158 -
GELSVCDSTSEWV Q8QG75_9SAUR 135 135 -
GELSVCDSISEWV A3FPG9_XENTR 136 136 -
GELSVCDSISEWV Q63ZM5_XENLA 136 136 -
GELSVCDSISEWV A4L7M3_BOMOR 136 136 -
GELSVCDGISEWV BDNF_FELCA 136 136 -
GEHSVCDSISVWV NGFV3_TROCA 134 134 -
GEFSVCDSTSEWV Q8QG76_9SAUR 135 135 -
GEQSVCDSISEWV NGFV_PSEPO 134 134 -
GELSVCDSISQWV BDNF_XIPMA 158 158 -
GEYSVCDSISVWV NGFV1_NAJSP 134 134 -
GEYSVCDSISVWV NGFV1_PSETE 134 134 -
GEYSVCDSISVWV NGFV1_OXYMI 134 134 -
GEYSVCDSISVWV Q3I5F4_9SAUR 134 134 -
GEYSVCDSISVWV NGFV2_OXYMI 134 134 -
GEHSVCDSISVWV NGFV1_HOPST 134 134 -
GEHSVCDSISEWV NGFV1_PSEAU 134 134 -
GEHSVCDSISEWV NGFV3_PSEAU 134 134 -
GEHSVCDSISVWV NGF_BUNMU 134 134 -
GEHSVCDSVSVWV NGFV5_TROCA 134 134 -
GEHSVCDSISVWV Q1W7Q6_9SAUR 134 134 -
GELSVCDSTSEWV Q8QG74_9SAUR 135 135 -
GEYSVCDSVSVWV A6MFL5_DEMVE 134 134 -
GEYSVCDSVSVWV A6MFL7_DEMVE 134 134 -
GEYSVCDSVSVWV A6MFL6_DEMVE 134 134 -
GEFSVCDSISVWV NGF_BOVIN 131 131 -
GEFSVCDSVSVWV A1A4E5_HUMAN 131 131 -
GEFSVCDSVSVWV NGF_SAIBB 131 131 -
GEFSVCDSVSVWV NGF_PONPY 131 131 -
GEFSVCDSVSVWV NGF_PANTR 131 131 -
GEFSVCDSVSVWV NGF_HUMAN 131 131 -
GEFSVCDSVSVWV NGF_GORGO 131 131 -
GEHSVCDSISEWV NGFV2_PSEAU 134 134 -
GEHSVCDSVSDWV NGFV1_NOTSC 134 134 -
GEHSVCDSVSDWV NGFV4_TROCA 134 134 -
GEHSVCDSVSDWV NGFV2_TROCA 134 134 -
GEHSVCDSISVWV NGFV1_TROCA 134 134 -
GEFSVCDSVSVWV NGF_PRANA 131 131 -
GEFSVCDSVSVWV NGF_RAT 131 131 -
GEYSVCDSVSMWV NGF_XENLA 123 123 -
GEHSVCDSISVWV NGFV2_HOPST 134 134 -
GEFSVCDSVSMWV NGF_CHICK 134 134 -
GEHSVCDSVSDWV NGFV3_NOTSC 134 134 -
GEFSVCDSVSVWV NGF_CAVPO 131 131 -
GEYSVCDSVNVWV NGFV_BOTJR 131 131 -
GEHSVCDSVSDWV NGFV2_NOTSC 134 134 -
GEFSVCDSVSVWV NGF_DABRR 7 7 -
EELSVCDSISEWV Q8QG77_9SALA 136 136 -
GEFSVCDSVSVWV NGFV_VIPLE 134 134 -
GEYSVCDSISVWV NGFV2_PSETE 134 134 -
GEHSVCDSVSAWV NGFV2_NAJSP 134 134 -
GEFSVCDSVSVWV NGF_MOUSE 131 131 -
GEFSVCDSVSVWV Q6LDU8_MOUSE 197 197 -
GEYSVCDSVNVWV NGFV_CRODU 131 131 -
GEHSVCDSVSAWV NGF_NAJNA 9 9 -
GEYSVCDSESLWV NTF3_BOVIN 143 143 -
GEYSVCDSESLWV Q6GLW9_XENLA 150 150 -
GEYSVCDSESLWV Q3V1A4_MOUSE 161 161 -
GEYSVCDSESLWV NT3_XENLA 150 150 -
GEYSVCDSESLWV NT3_RAT 148 148 -
GEYSVCDSESLWV NT3_MOUSE 148 148 -
GEYSVCDSESLWV NT3_HUMAN 147 147 -
GEYSVCDSESLWV NT3_CHICK 147 147 -
GELSVCDSVNVWV NT4_XENLA 126 126 -
GEHSVCDSVSAWV NGFV_NAJAT 9 9 -
GEHSVCDSVSAWV NGFV_NAJKA 9 9 -
GEYSVCDSESLWV NTF3_PIG 147 147 -
GEYSLCDSESLWV NTF3_FELCA 147 147 -
GELAVCDAVSGWV NTF4_MOUSE 91 91 -
GELAVCDAVSGWV NT4_RAT 91 91 -
GELAVCDAVSGWV NT4_HUMAN 92 92 -
GEYSVCDSEEHWV O73797 105 105 -
GEYSVCDSINTWV Q789C7_XIPHE 152 152 -
GEYSVCDSINTWV Q91988 152 152 -
GEYPACDSESRWV Q9XY95_LAMFL 177 177 -
GVYSVCESVSVWV NGF_XIPMA 85 85 -
GVYSVCESISHWE NGF_DANRE 85 85 -
GIYLSCESSSTWV Q70H82_FOWPV 74 74 -
GIYLSCESSSTWV Q9J5D9_FOWPV 74 74 -
GLYLACESTSTWV Q6VZP8_CNPV 81 81 -

Motif 2 width=11
Element Seqn Id St Int Rpt
LKQYFYETKCN A2AII2_MOUSE 187 28 -
LKQYFYETKCN Q8VHH4_MOUSE 179 28 -
LKQYFYETKCN Q6YNR3_HUMAN 185 28 -
LKQYFYETKCN Q6YNR2_HUMAN 192 28 -
LKQYFYETKCN Q6DN19_HUMAN 177 28 -
LKQYFYETKCN Q598Q1_HUMAN 177 28 -
LKQYFYETKCN Q541P3_MOUSE 179 28 -
LKQYFYETKCN BDNF_URSML 177 28 -
LKQYFYETKCN BDNF_URSAR 177 28 -
LKQYFYETKCN BDNF_SPECI 177 28 -
LKQYFYETKCN BDNF_SELTH 177 28 -
LKQYFYETKCN BDNF_RAT 179 28 -
LKQYFYETKCN BDNF_PROLO 177 28 -
LKQYFYETKCN BDNF_PIG 182 28 -
LKQYFYETKCN BDNF_PANTR 177 28 -
LKQYFYETKCN BDNF_MOUSE 179 28 -
LKQYFYETKCN BDNF_HUMAN 177 28 -
LKQYFYETKCN BDNF_HORSE 177 28 -
LKQYFYETKCN BDNF_CANFA 177 28 -
LKQYFYETKCN BDNF_BOVIN 180 28 -
LKQYFYETKCN BDNF_AILME 177 28 -
LKQYFYETKCN BDNF_AILFU 177 28 -
LKQYFYETKCN A7LA92_HUMAN 259 28 -
LKQYFYETKCN A7LA85_HUMAN 206 28 -
LKQYFYETKCN O70183 185 28 -
LKQYFYETKCN A2ICR4_AMBME 177 28 -
LKQYFYETKCN A4L7M5_SALSL 177 28 -
LKQYFYETKCN A4L7M4_9SALA 177 28 -
LKQYFYETKCN BDNF_CHICK 176 28 -
LKQYFYETKCN Q8AV78_NIPNI 176 28 -
LKQYFYETKCN Q4JHT7_POEGU 176 28 -
LKQYFYETKCN BDNF_LIPVE 178 28 -
LKQYFYETKCN Q8CCH9_MOUSE 179 28 -
LKQYFYETKCN BDNF_CYPCA 200 28 -
LKQYFYETKCN Q9YH42_DANRE 200 28 -
LKQYFYETKCN Q8JGW4_PAROL 199 28 -
LKQYFYETKCN Q6NZ01_DANRE 200 28 -
LKQYFYETKCN Q06B76_DICLA 199 28 -
LKQYFYETKCN Q8QG75_9SAUR 176 28 -
LKQYFYETKCN A3FPG9_XENTR 177 28 -
LKQYFYETKCN Q63ZM5_XENLA 177 28 -
LKQYFYETKCN A4L7M3_BOMOR 177 28 -
LKQYFYETKCN BDNF_FELCA 177 28 -
YKQYFFETKCR NGFV3_TROCA 173 26 -
LKQYFYETKCN Q8QG76_9SAUR 176 28 -
YKQYFFETKCR NGFV_PSEPO 172 25 -
LKQYFYETKCN BDNF_XIPMA 199 28 -
YKQYFFETKCR NGFV1_NAJSP 173 26 -
YKQYFFETKCR NGFV1_PSETE 173 26 -
FKQYFFETKCR NGFV1_OXYMI 173 26 -
FKQYFFETKCR Q3I5F4_9SAUR 173 26 -
FKQYFFETKCR NGFV2_OXYMI 173 26 -
YKQYFFETKCR NGFV1_HOPST 173 26 -
YKQYFFETKCR NGFV1_PSEAU 172 25 -
YKQYFFETKCR NGFV3_PSEAU 172 25 -
YKQYFFETKCR NGF_BUNMU 173 26 -
YKQYFFETKCR NGFV5_TROCA 173 26 -
YKQYFFETKCR Q1W7Q6_9SAUR 173 26 -
LKQYFYETKCS Q8QG74_9SAUR 176 28 -
YKQYFFETKCK A6MFL5_DEMVE 172 25 -
YKQYFFETKCK A6MFL7_DEMVE 172 25 -
YKQYFFETKCK A6MFL6_DEMVE 172 25 -
FKQYFFETKCR NGF_BOVIN 170 26 -
FKQYFFETKCR A1A4E5_HUMAN 170 26 -
FKQYFFETKCR NGF_SAIBB 170 26 -
FKQYFFETKCR NGF_PONPY 170 26 -
FKQYFFETKCR NGF_PANTR 170 26 -
FKQYFFETKCR NGF_HUMAN 170 26 -
FKQYFFETKCR NGF_GORGO 170 26 -
YKQYFFETKCR NGFV2_PSEAU 172 25 -
YKQYFFETKCR NGFV1_NOTSC 172 25 -
YKQYFFETKCR NGFV4_TROCA 172 25 -
YKQYFFETKCR NGFV2_TROCA 172 25 -
YMQYFFETKCR NGFV1_TROCA 173 26 -
FKQYFFETKCR NGF_PRANA 170 26 -
FKQYFFETKCR NGF_RAT 170 26 -
FKQYFFETKCR NGF_XENLA 162 26 -
YKQYFFETKCR NGFV2_HOPST 173 26 -
FKQYFFETKCR NGF_CHICK 173 26 -
YKQYFFETKCR NGFV3_NOTSC 172 25 -
FKQYFFETKCR NGF_CAVPO 170 26 -
YKQYFFETKCR NGFV_BOTJR 170 26 -
YKQYFFETKCR NGFV2_NOTSC 172 25 -
YKQYFFETKCK NGF_DABRR 46 26 -
LKQYFYETKRN Q8QG77_9SALA 177 28 -
YRQYFFETKCK NGFV_VIPLE 173 26 -
YKQYFFETKYR NGFV2_PSETE 173 26 -
YKQYFFETKCK NGFV2_NAJSP 172 25 -
FRQYFFETKCR NGF_MOUSE 170 26 -
FRQYFFETKCR Q6LDU8_MOUSE 236 26 -
YKQYFFETKCR NGFV_CRODU 170 26 -
YKEYFFETKCK NGF_NAJNA 47 25 -
VKQYFYETRCK NTF3_BOVIN 182 26 -
VKQYFYETRCK Q6GLW9_XENLA 189 26 -
VKQYFYETRCK Q3V1A4_MOUSE 200 26 -
VKQYFYETRCK NT3_XENLA 189 26 -
VKQYFYETRCK NT3_RAT 187 26 -
VKQYFYETRCK NT3_MOUSE 187 26 -
VKQYFYETRCK NT3_HUMAN 186 26 -
VKQYFYETRCK NT3_CHICK 186 26 -
LKQYFFETKCN NT4_XENLA 165 26 -
YKEYFFETKCK NGFV_NAJAT 47 25 -
YKEYFFETKCK NGFV_NAJKA 47 25 -
VKQYFYETRCK NTF3_PIG 186 26 -
VKQYFYETRCK NTF3_FELCA 186 26 -
LRQYFFETRCK NTF4_MOUSE 131 27 -
LRQYFFETRCK NT4_RAT 131 27 -
LRQYFFETRCK NT4_HUMAN 132 27 -
KKQLFYETTCR O73797 144 26 -
KKQLFYETTCR Q789C7_XIPHE 190 25 -
KKQLFYETTCR Q91988 190 25 -
VKQYFYETRCK Q9XY95_LAMFL 233 43 -
KKQYFFETTCH NGF_XIPMA 124 26 -
KKQYFFETTCS NGF_DANRE 124 26 -
YYQYLFETKCK Q70H82_FOWPV 113 26 -
YYQYLFETKCK Q9J5D9_FOWPV 113 26 -
YYQYMLETKCV Q6VZP8_CNPV 120 26 -

Motif 3 width=27
Element Seqn Id St Int Rpt
GCRGIDKRHWNSQCRTTQSYVRALTMD A2AII2_MOUSE 205 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD Q8VHH4_MOUSE 197 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD Q6YNR3_HUMAN 203 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD Q6YNR2_HUMAN 210 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD Q6DN19_HUMAN 195 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD Q598Q1_HUMAN 195 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD Q541P3_MOUSE 197 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD BDNF_URSML 195 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD BDNF_URSAR 195 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD BDNF_SPECI 195 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD BDNF_SELTH 195 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD BDNF_RAT 197 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD BDNF_PROLO 195 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD BDNF_PIG 200 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD BDNF_PANTR 195 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD BDNF_MOUSE 197 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD BDNF_HUMAN 195 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD BDNF_HORSE 195 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD BDNF_CANFA 195 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD BDNF_BOVIN 198 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD BDNF_AILME 195 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD BDNF_AILFU 195 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD A7LA92_HUMAN 277 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD A7LA85_HUMAN 224 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD O70183 203 7 -
GCRGIDKRYWNSQCRTTQSYVRALTMD A2ICR4_AMBME 195 7 -
GCRGIDKRYWNSQCRTTQSYVRALTMD A4L7M5_SALSL 195 7 -
GCRGIDKRYWNSQCRTTQSYVRALTMD A4L7M4_9SALA 195 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD BDNF_CHICK 194 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD Q8AV78_NIPNI 194 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD Q4JHT7_POEGU 194 7 -
GCRGIDKRHWDSQCRTTQSYVRALTMD BDNF_LIPVE 196 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD Q8CCH9_MOUSE 197 7 -
GCRGIDKRHYNSQCRTTQSYVRALTMD BDNF_CYPCA 218 7 -
GCRGIDKRHYNSQCRTTQSYVRALTMD Q9YH42_DANRE 218 7 -
GCRGIDKRHYNSQCRTTQSYVRALTMD Q8JGW4_PAROL 217 7 -
GCRGIDKRHYNSQCRTTQSYVRALTMD Q6NZ01_DANRE 218 7 -
GCRGIDKRHYNSQCRTTQSYVRALTMD Q06B76_DICLA 217 7 -
GCRGIDKRYWNSQCRTTQSYVRALTMD Q8QG75_9SAUR 194 7 -
GCRGIDKRYWNSQCRTTQSYVRAFTMD A3FPG9_XENTR 195 7 -
GCRGIDKRYWNSQCRTTQSYVRAFTMD Q63ZM5_XENLA 195 7 -
GCRGIDKRYWNSQCRTTQSYVRAFTMD A4L7M3_BOMOR 195 7 -
GCRGIDKRHWNSQCRTTQSYVRALTMD BDNF_FELCA 195 7 -
GCRGIDSRHWNSYCTTTQAYVRALTME NGFV3_TROCA 191 7 -
GCRGIDKRYWNSQCRTTQSYVRALTMD Q8QG76_9SAUR 194 7 -
GCRGIDSSHWNSYCTTTQTFVRALTME NGFV_PSEPO 190 7 -
GCRGIDKRHYTSQCRTTQSYVRALTMD BDNF_XIPMA 217 7 -
GCRGIDSRHWNSYCTTTHTFVKALTME NGFV1_NAJSP 191 7 -
GCRGIDSRHWNSYCTTTHTFVKALTME NGFV1_PSETE 191 7 -
GCRGIDSGHWNSYCTTTQTFVRALTME NGFV1_OXYMI 191 7 -
GCRGIDSGHWNSYCTTTQTFVRALTME Q3I5F4_9SAUR 191 7 -
GCRGIDSGHWNSYCTTTQTFVRALTME NGFV2_OXYMI 191 7 -
GCRGTDSRHWNSYCTTTQTFVRALTME NGFV1_HOPST 191 7 -
GCRGIDSRLWNSYCTTTQTFVKALTME NGFV1_PSEAU 190 7 -
GCRGIDSRLWNSYCTTTQTFVKALTME NGFV3_PSEAU 190 7 -
GCRGIDSRHWNSYCTTTDTFVKALTME NGF_BUNMU 191 7 -
GCRGTDSRHWNSYCTTTQTFVRALTME NGFV5_TROCA 191 7 -
GCRGTDSRHWNSYCTTTQTFVKALTME Q1W7Q6_9SAUR 191 7 -
GCRGIDKRYWNSQCRTTQSYVRALTTD Q8QG74_9SAUR 194 7 -
GCRGIDSRHWNSYCTTTQSFVKALTKE A6MFL5_DEMVE 190 7 -
GCRGIDSRHWNSYCTTTQSFVKALTKE A6MFL7_DEMVE 190 7 -
GCRGIDSRHWNSYCTTTQSFVKALTKE A6MFL6_DEMVE 190 7 -
GCRGIDAKHWNSYCTTTHTFVKALTMD NGF_BOVIN 188 7 -
GCRGIDSKHWNSYCTTTHTFVKALTMD A1A4E5_HUMAN 188 7 -
GCRGIDSKHWNSYCTTTHTFVKALTMD NGF_SAIBB 188 7 -
GCRGIDSKHWNSYCTTTHTFVKALTMD NGF_PONPY 188 7 -
GCRGIDSKHWNSYCTTTHTFVKALTMD NGF_PANTR 188 7 -
GCRGIDSKHWNSYCTTTHTFVKALTMD NGF_HUMAN 188 7 -
GCRGIDSKHWNSYCTTTHTFVKALTMD NGF_GORGO 188 7 -
GCRGIDSRLWTSYCTKTQTFVRALTME NGFV2_PSEAU 190 7 -
ECRGIDSRLWNSYCTTTQTFVRALTME NGFV1_NOTSC 192 9 -
ECRGIDSRLWNSYCTTTQTFVRALTME NGFV4_TROCA 192 9 -
ECRGIDSRLWNSYCTTTQTFVRALTME NGFV2_TROCA 192 9 -
GCRGIDSRHWNSYCTTTQAYVRALTME NGFV1_TROCA 193 9 -
GCRGIDSKHWNSYCTTTHTFVKALTTD NGF_PRANA 188 7 -
GCRGIDSKHWNSYCTTTHTFVKALTTD NGF_RAT 188 7 -
GCRGIDAKHWNSYCTTTHTFVKALTME NGF_XENLA 180 7 -
ECRGIDSRLWNSYCTRTQTFVKALTME NGFV2_HOPST 193 9 -
GCRGIDAKHWNSYCTTTHTFVKALTME NGF_CHICK 191 7 -
ECRGIDSRLWNSYCTTTRTFVRALTME NGFV3_NOTSC 192 9 -
GCRGIDSKHWNSYCTTTHTFVKALTTA NGF_CAVPO 188 7 -
GCRGIDARHWNSYCTTTNTFVKALTME NGFV_BOTJR 188 7 -
ERRGIDSRLWNSYCTTTQTFVRALTME NGFV2_NOTSC 192 9 -
GCRGIDAKHWNSYCTTTDTFVRALTME NGF_DABRR 64 7 -
GCRGIDKRYWNSQCRTTQSYVRALTVD Q8QG77_9SALA 195 7 -
GCRGIDAKHWNSYCTTTDTFVRALTME NGFV_VIPLE 191 7 -
GCRGIDSGHWNSYCTTTQTYVRALTME NGFV2_PSETE 191 7 -
GCRGIDSSHWNSYCTETDTFIKALTME NGFV2_NAJSP 190 7 -
GCRGIDSKHWNSYCTTTHTFVKALTTD NGF_MOUSE 188 7 -
GCRGIDSKHWNSYCTTTHTFVKALTTD Q6LDU8_MOUSE 254 7 -
GCRGIDARHWNSYCTTTNTFVKALTME NGFV_CRODU 188 7 -
GCRGIDSSHWNSYCTETDTFIKALTME NGF_NAJNA 65 7 -
GCRGIDDKHWNSQCKTSQTYVRALTSE NTF3_BOVIN 200 7 -
GCRGIDDKHWNSQCKTSQTYVRALTSE Q6GLW9_XENLA 207 7 -
GCRGIDDKHWNSQCKTSQTYVRALTSE Q3V1A4_MOUSE 218 7 -
GCRGIDDKHWNSQCKTSQTYVRALTSE NT3_XENLA 207 7 -
GCRGIDDKHWNSQCKTSQTYVRALTSE NT3_RAT 205 7 -
GCRGIDDKHWNSQCKTSQTYVRALTSE NT3_MOUSE 205 7 -
GCRGIDDKHWNSQCKTSQTYVRALTSE NT3_HUMAN 204 7 -
GCRGIDDKHWNSQCKTSQTYVRALTSE NT3_CHICK 204 7 -
GCRGVDKKQWISECKAKQSYVRALTID NT4_XENLA 183 7 -
GCRGIDSSHWNSYCTETDTFIKALTME NGFV_NAJAT 65 7 -
GCRGIDSSHWNSYCTETDTFIKALTME NGFV_NAJKA 65 7 -
GCRGIDDKHWNSQCKTSQTYFRALTSY NTF3_PIG 204 7 -
GCRGIDDKHWNSQCKTSQTYVRALTSE NTF3_FELCA 204 7 -
GCRGVDRRHWLSECKAKQSYVRALTAD NTF4_MOUSE 156 14 -
GCRGVDRRHWLSECKAKQSYVRALTAD NT4_RAT 156 14 -
GCRGVDRRHWVSECKAKQSYVRALTAD NT4_HUMAN 157 14 -
SCRGIDSKHWNSYCTNTHTYVRALTSY O73797 177 22 -
GCRGIDSRYWNSHCTNTDIYVSALTVF Q789C7_XIPHE 230 29 -
GCRGIDSRYWNSHCTNTDIYVSALTVF Q91988 230 29 -
ACRGADELRWRSQCKTTQSFVRALTED Q9XY95_LAMFL 271 27 -
RCLGIDARHWNSHCTNSHTFVRALTSS NGF_XIPMA 142 7 -
GCLGIDARHWNSYCTNSHTFVRALTSF NGF_DANRE 142 7 -
GCLGIDTRFWSSYCSTSHSFVNSIVIK Q70H82_FOWPV 130 6 -
GCLGIDTRFWSSYCSTSHSFVNSIVIK Q9J5D9_FOWPV 130 6 -
GCLGTDTRFWNSYCTTSHSFVNSIVLE Q6VZP8_CNPV 137 6 -

Motif 4 width=13
Element Seqn Id St Int Rpt
WRFIRIDTSCVCT A2AII2_MOUSE 238 6 -
WRFIRIDTSCVCT Q8VHH4_MOUSE 230 6 -
WRFIRIDTSCVCT Q6YNR3_HUMAN 236 6 -
WRFIRIDTSCVCT Q6YNR2_HUMAN 243 6 -
WRFIRIDTSCVCT Q6DN19_HUMAN 228 6 -
WRFIRIDTSCVCT Q598Q1_HUMAN 228 6 -
WRFIRIDTSCVCT Q541P3_MOUSE 230 6 -
WRFIRIDTSCVCT BDNF_URSML 228 6 -
WRFIRIDTSCVCT BDNF_URSAR 228 6 -
WRFIRIDTSCVCT BDNF_SPECI 228 6 -
WRFIRIDTSCVCT BDNF_SELTH 228 6 -
WRFIRIDTSCVCT BDNF_RAT 230 6 -
WRFIRIDTSCVCT BDNF_PROLO 228 6 -
WRFIRIDTSCVCT BDNF_PIG 233 6 -
WRFIRIDTSCVCT BDNF_PANTR 228 6 -
WRFIRIDTSCVCT BDNF_MOUSE 230 6 -
WRFIRIDTSCVCT BDNF_HUMAN 228 6 -
WRFIRIDTSCVCT BDNF_HORSE 228 6 -
WRFIRIDTSCVCT BDNF_CANFA 228 6 -
WRFIRIDTSCVCT BDNF_BOVIN 231 6 -
WRFIRIDTSCVCT BDNF_AILME 228 6 -
WRFIRIDTSCVCT BDNF_AILFU 228 6 -
WRFIRIDTSCVCT A7LA92_HUMAN 310 6 -
WRFIRIDTSCVCT A7LA85_HUMAN 257 6 -
WRFIRIDTSCVCT O70183 236 6 -
WRFIRIDTSCVCT A2ICR4_AMBME 228 6 -
WRFIRIDTSCVCT A4L7M5_SALSL 228 6 -
WRFIRIDTSCVCT A4L7M4_9SALA 228 6 -
WRFIRIDTSCVCT BDNF_CHICK 227 6 -
WRFIRIDTSCVCT Q8AV78_NIPNI 227 6 -
WRFIRIDTSCVCT Q4JHT7_POEGU 227 6 -
WRFIRIDTSCVCT BDNF_LIPVE 229 6 -
WRLIRIDTSCVCT Q8CCH9_MOUSE 230 6 -
WRFIRIDTSCVCT BDNF_CYPCA 251 6 -
WRFIRIDTSCVCT Q9YH42_DANRE 251 6 -
WRFIRIDTSCVCT Q8JGW4_PAROL 250 6 -
WRFIRIDTSCVCT Q6NZ01_DANRE 251 6 -
WRFIRIDTSCVCT Q06B76_DICLA 250 6 -
WRFIRIDTSCVCT Q8QG75_9SAUR 227 6 -
WRFIRIDTSCVCT A3FPG9_XENTR 228 6 -
WRFIRIDTSCVCT Q63ZM5_XENLA 228 6 -
WRFIRIDTSCVCT A4L7M3_BOMOR 228 6 -
WRFIRIDTSCVCT BDNF_FELCA 228 6 -
WRFIRIDTACVCV NGFV3_TROCA 223 5 -
WRFIRIDTSCVCT Q8QG76_9SAUR 227 6 -
WRFIRIDTACVCV NGFV_PSEPO 222 5 -
WRFIRIDTSCVCT BDNF_XIPMA 250 6 -
WRFIRIDTACVCV NGFV1_NAJSP 223 5 -
WRFIRIDTACVCV NGFV1_PSETE 223 5 -
WRFIRIDTACVCV NGFV1_OXYMI 223 5 -
WRFIRIDTACVCV Q3I5F4_9SAUR 223 5 -
WRFIRIDTACVCV NGFV2_OXYMI 223 5 -
WRFIRIDTACVCV NGFV1_HOPST 223 5 -
WRFIRIDTACVCV NGFV1_PSEAU 222 5 -
WRFIRIDTACVCV NGFV3_PSEAU 222 5 -
WRFIRIDTACVCV NGF_BUNMU 223 5 -
WRFIRIDTACVCV NGFV5_TROCA 223 5 -
WRFIRIDTACVCV Q1W7Q6_9SAUR 223 5 -
WRFIRIDTSCVCT Q8QG74_9SAUR 227 6 -
WRFIRIDTACVCV A6MFL5_DEMVE 222 5 -
WRFIRIDTACVCV A6MFL7_DEMVE 222 5 -
WRFIRIDTACVCV A6MFL6_DEMVE 222 5 -
WRFIRIDTACVCV NGF_BOVIN 220 5 -
WRFIRIDTACVCV A1A4E5_HUMAN 220 5 -
WRFIRIDTACVCV NGF_SAIBB 220 5 -
WRFIRIDTACVCV NGF_PONPY 220 5 -
WRFIRIDTACVCV NGF_PANTR 220 5 -
WRFIRIDTACVCV NGF_HUMAN 220 5 -
WRFIRIDTACVCV NGF_GORGO 220 5 -
WRFIRIDTACVCV NGFV2_PSEAU 222 5 -
WRFIRIDTACVCV NGFV1_NOTSC 224 5 -
WRFIRIDTACVCV NGFV4_TROCA 224 5 -
WRFIRIDTACVCV NGFV2_TROCA 224 5 -
WRFIRIDTACVCV NGFV1_TROCA 225 5 -
WRFIRIDTACVCV NGF_PRANA 220 5 -
WRFIRIDTACVCV NGF_RAT 220 5 -
WRFIRIDTACVCV NGF_XENLA 212 5 -
WRFIRIDTACVCV NGFV2_HOPST 225 5 -
WRFIRIDTACVCV NGF_CHICK 223 5 -
WRFIRIDTACVCV NGFV3_NOTSC 224 5 -
WRFIRIDTACVCV NGF_CAVPO 220 5 -
WRFIRIDTACVCV NGFV_BOTJR 220 5 -
WRFIRIDTACVCV NGFV2_NOTSC 224 5 -
WRFIRINTACVCV NGF_DABRR 96 5 -
WRFIRIDTSCVCT Q8QG77_9SALA 228 6 -
WRFIRIDTACVCV NGFV_VIPLE 223 5 -
WRFIRIDAACVCV NGFV2_PSETE 223 5 -
WRFIRIDTACVCV NGFV2_NAJSP 222 5 -
WRFIRIDTACVCV NGF_MOUSE 220 5 -
WRFIRIDTACVCV Q6LDU8_MOUSE 286 5 -
WRFIRIDSACVCV NGFV_CRODU 220 5 -
WRFIRIDTACVCV NGF_NAJNA 97 5 -
WRWIRIDTSCVCA NTF3_BOVIN 233 6 -
WRWIRIDTSCVCA Q6GLW9_XENLA 240 6 -
WRWIRIDTSCVCA Q3V1A4_MOUSE 251 6 -
WRWIRIDTSCVCA NT3_XENLA 240 6 -
WRWIRIDTSCVCA NT3_RAT 238 6 -
WRWIRIDTSCVCA NT3_MOUSE 238 6 -
WRWIRIDTSCVCA NT3_HUMAN 237 6 -
WRWIRIDTSCVCA NT3_CHICK 237 6 -
WRWIRIDTACVCT NT4_XENLA 216 6 -
WRFIRIETACVCV NGFV_NAJAT 97 5 -
WRFIRIETACVCV NGFV_NAJKA 97 5 -
WRWIRIDTSCVCA NTF3_PIG 237 6 -
WRWIRIDTSCVCA NTF3_FELCA 237 6 -
WRWIRIDTACVCT NTF4_MOUSE 189 6 -
WRWIRIDTACVCT NT4_RAT 189 6 -
WRWIRIDTACVCT NT4_HUMAN 190 6 -
WRFIRINAACVCV O73797 209 5 -
WRFIRINAACVCV Q789C7_XIPHE 262 5 -
WRFIRINAACVCV Q91988 262 5 -
WRWIRLDTACVCT Q9XY95_LAMFL 304 6 -
WRLIRINVACVCV NGF_XIPMA 174 5 -
WRLIRINVACVCV NGF_DANRE 174 5 -
WEYIRIGTSCVCV Q70H82_FOWPV 162 5 -
WEYIRIGTSCVCV Q9J5D9_FOWPV 162 5 -
WDYVRIDASCICV Q6VZP8_CNPV 170 6 -